RNA–Protein interactions for RNA: ENST00000249776.12

KNSTRN-201, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNSTRN, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-201ENST00000249776 CHPF2Q9P2E5 772 aa18.67■□□□□ 0.58
KNSTRN-201ENST00000249776 UBN2Q6ZU65 1347 aa18.67■□□□□ 0.58
KNSTRN-201ENST00000249776 SLX4Q8IY92 1834 aa18.67■□□□□ 0.58
KNSTRN-201ENST00000249776 FER1L6Q2WGJ9 1857 aa18.67■□□□□ 0.58
KNSTRN-201ENST00000249776 CACNA1FO60840 1977 aa18.67■□□□□ 0.58
KNSTRN-201ENST00000249776 GNAI2P04899 355 aa18.66■□□□□ 0.58
KNSTRN-201ENST00000249776 CSPP1Q1MSJ5 1256 aa18.66■□□□□ 0.58
KNSTRN-201ENST00000249776 ZSCAN23Q3MJ62 389 aa18.66■□□□□ 0.58
KNSTRN-201ENST00000249776 IL17RAQ96F46 866 aa18.66■□□□□ 0.58
KNSTRN-201ENST00000249776 RNF181Q9P0P0 153 aa18.66■□□□□ 0.58
KNSTRN-201ENST00000249776 ZC3H4Q9UPT8 1303 aaKnown RBP18.66■□□□□ 0.58
KNSTRN-201ENST00000249776 TNRC6CQ9HCJ0 1690 aaKnown RBP18.66■□□□□ 0.58
KNSTRN-201ENST00000249776 LMNB1P20700 586 aa18.66■□□□□ 0.58
KNSTRN-201ENST00000249776 C1QTNF8P60827 252 aa18.66■□□□□ 0.58
KNSTRN-201ENST00000249776 PRPF40BQ6NWY9 871 aaKnown RBP18.66■□□□□ 0.58
KNSTRN-201ENST00000249776 ZNF526Q8TF50 670 aaPredicted RBP18.66■□□□□ 0.58
KNSTRN-201ENST00000249776 HYPKQ9NX55 129 aa18.66■□□□□ 0.58
KNSTRN-201ENST00000249776 OFD1O75665 1012 aa18.65■□□□□ 0.58
KNSTRN-201ENST00000249776 NCLP19338 710 aaKnown RBP18.65■□□□□ 0.58
KNSTRN-201ENST00000249776 AIMP1Q12904 312 aaKnown RBP18.65■□□□□ 0.58
KNSTRN-201ENST00000249776 STK31Q9BXU1 1019 aa18.65■□□□□ 0.58
KNSTRN-201ENST00000249776 ABCC12Q96J65 1359 aa18.64■□□□□ 0.57
KNSTRN-201ENST00000249776 CCDC88AQ3V6T2 1871 aa18.64■□□□□ 0.57
KNSTRN-201ENST00000249776 C21orf2O43822 256 aa18.64■□□□□ 0.57
KNSTRN-201ENST00000249776 RASSF7Q02833 373 aa18.64■□□□□ 0.57
KNSTRN-201ENST00000249776 SUSD4Q5VX71 490 aa18.64■□□□□ 0.57
KNSTRN-201ENST00000249776 CAVIN1Q6NZI2 390 aaKnown RBP18.64■□□□□ 0.57
KNSTRN-201ENST00000249776 LTBP3Q9NS15 1303 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 NTSR2O95665 410 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 ALDH1B1P30837 517 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 PDE1AP54750 535 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 CRY2Q49AN0 593 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 ERFEQ4G0M1 354 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 LRSAM1Q6UWE0 723 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 NUTM1Q86Y26 1132 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 PDLIM2Q96JY6 352 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 NFKBIEO00221 500 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 PLBD2Q8NHP8 589 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 MAP7D2Q96T17 732 aa18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 UTP14AQ9BVJ6 771 aaKnown RBP18.63■□□□□ 0.57
KNSTRN-201ENST00000249776 TIAM2Q8IVF5 1701 aa18.62■□□□□ 0.57
KNSTRN-201ENST00000249776 DICER1Q9UPY3 1922 aaKnown RBP18.62■□□□□ 0.57
KNSTRN-201ENST00000249776 ZNF500O60304 480 aaPredicted RBP18.62■□□□□ 0.57
KNSTRN-201ENST00000249776 TCIRG1Q13488 830 aa18.62■□□□□ 0.57
KNSTRN-201ENST00000249776 CUL4AQ13619 759 aa18.62■□□□□ 0.57
KNSTRN-201ENST00000249776 C16orf71Q8IYS4 520 aaPredicted RBP18.62■□□□□ 0.57
KNSTRN-201ENST00000249776 MEIS3Q99687 375 aa18.62■□□□□ 0.57
KNSTRN-201ENST00000249776 LRRCC1Q9C099 1032 aa18.62■□□□□ 0.57
KNSTRN-201ENST00000249776 CCDC39Q9UFE4 941 aa18.62■□□□□ 0.57
KNSTRN-201ENST00000249776 NOL7Q9UMY1 257 aaKnown RBP18.62■□□□□ 0.57
KNSTRN-201ENST00000249776 ANKRD13DQ6ZTN6 518 aa18.61■□□□□ 0.57
KNSTRN-201ENST00000249776 ZNF219Q9P2Y4 722 aaPredicted RBP18.61■□□□□ 0.57
KNSTRN-201ENST00000249776 CCDC30Q5VVM6 783 aa18.6■□□□□ 0.57
KNSTRN-201ENST00000249776 TAOK3Q9H2K8 898 aa18.6■□□□□ 0.57
KNSTRN-201ENST00000249776 PRPF40AO75400 957 aaKnown RBP18.6■□□□□ 0.57
KNSTRN-201ENST00000249776 CCDC93Q567U6 631 aa18.6■□□□□ 0.57
KNSTRN-201ENST00000249776 SLC10A5Q5PT55 438 aa18.6■□□□□ 0.57
KNSTRN-201ENST00000249776 NLRP10Q86W26 655 aa18.6■□□□□ 0.57
KNSTRN-201ENST00000249776 C7orf43Q8WVR3 580 aa18.6■□□□□ 0.57
KNSTRN-201ENST00000249776 RPGRQ92834 1020 aaKnown RBP18.6■□□□□ 0.57
KNSTRN-201ENST00000249776 ESYT1Q9BSJ8 1104 aa18.6■□□□□ 0.57
KNSTRN-201ENST00000249776 STAP2Q9UGK3 403 aa18.6■□□□□ 0.57
KNSTRN-201ENST00000249776 HOXA10P31260 410 aaPredicted RBP18.59■□□□□ 0.57
KNSTRN-201ENST00000249776 NLRP3Q96P20 1036 aa18.59■□□□□ 0.57
KNSTRN-201ENST00000249776 LETM1O95202 739 aaPredicted RBP18.58■□□□□ 0.57
KNSTRN-201ENST00000249776 ATP8B2P98198 1209 aa18.58■□□□□ 0.57
KNSTRN-201ENST00000249776 KIF3CO14782 793 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 RAB11FIP3O75154 756 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 BRD1O95696 1058 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 PRELPP51888 382 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 NEK4P51957 841 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 MTERF4Q7Z6M4 381 aaKnown RBP18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 RTKN2Q8IZC4 609 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 FAM184AQ8NB25 1140 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 RBM17Q96I25 401 aaKnown RBP18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 PDCL3Q9H2J4 239 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 SALL3Q9BXA9 1300 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 AK9Q5TCS8 1911 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 SMARCA5O60264 1052 aaPredicted RBP18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 MX1P20591 662 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 UVSSAQ2YD98 709 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 CC2D2BQ6DHV5 1058 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 TMX3Q96JJ7 454 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 CRAMP1Q96RY5 1269 aa18.57■□□□□ 0.56
KNSTRN-201ENST00000249776 SH3TC1Q8TE82 1336 aa18.56■□□□□ 0.56
KNSTRN-201ENST00000249776 GRIPAP1Q4V328 841 aa18.56■□□□□ 0.56
KNSTRN-201ENST00000249776 KIAA1211Q6ZU35 1233 aa18.56■□□□□ 0.56
KNSTRN-201ENST00000249776 ISCA1Q9BUE6 129 aa18.56■□□□□ 0.56
KNSTRN-201ENST00000249776 TRMT112Q9UI30 125 aaKnown RBP18.56■□□□□ 0.56
KNSTRN-201ENST00000249776 WDR33Q9C0J8 1336 aaKnown RBP18.56■□□□□ 0.56
KNSTRN-201ENST00000249776 LAMB2P55268 1798 aa18.56■□□□□ 0.56
KNSTRN-201ENST00000249776 PDIA4P13667 645 aaKnown RBP18.55■□□□□ 0.56
KNSTRN-201ENST00000249776 RIC3Q7Z5B4 369 aa18.55■□□□□ 0.56
KNSTRN-201ENST00000249776 OTUD7AQ8TE49 926 aaPredicted RBP18.55■□□□□ 0.56
KNSTRN-201ENST00000249776 DDX58O95786 925 aaKnown RBP18.54■□□□□ 0.56
KNSTRN-201ENST00000249776 FKBP4Q02790 459 aaKnown RBP eCLIP18.54■□□□□ 0.56
KNSTRN-201ENST00000249776 TRIM28Q13263 835 aaKnown RBP18.54■□□□□ 0.56
KNSTRN-201ENST00000249776 RBSNQ9H1K0 784 aa18.54■□□□□ 0.56
KNSTRN-201ENST00000249776 NMRK2Q9NPI5 230 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms