RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CHMP3Q9Y3E7 222 aa30.67■■■□□ 2.5
SDF2L1-201ENST00000248958 SCN4AP35499 1836 aa30.67■■■□□ 2.5
SDF2L1-201ENST00000248958 ZNF541Q9H0D2 1346 aa30.67■■■□□ 2.5
SDF2L1-201ENST00000248958 GPC2Q8N158 579 aa30.66■■■□□ 2.5
SDF2L1-201ENST00000248958 SUCLG2Q96I99 432 aa30.66■■■□□ 2.5
SDF2L1-201ENST00000248958 L3MBTL3Q96JM7 780 aaPredicted RBP30.66■■■□□ 2.5
SDF2L1-201ENST00000248958 ZNRF3Q9ULT6 936 aa30.66■■■□□ 2.5
SDF2L1-201ENST00000248958 ATP2B4P23634 1241 aa30.65■■■□□ 2.5
SDF2L1-201ENST00000248958 CCDC57Q2TAC2 916 aa30.65■■■□□ 2.5
SDF2L1-201ENST00000248958 EPHA10Q5JZY3 1008 aa30.65■■■□□ 2.5
SDF2L1-201ENST00000248958 USP44Q9H0E7 712 aa30.65■■■□□ 2.5
SDF2L1-201ENST00000248958 MINPP1Q9UNW1 487 aa30.65■■■□□ 2.5
SDF2L1-201ENST00000248958 IQCA1LA6NCM1 817 aa30.64■■■□□ 2.5
SDF2L1-201ENST00000248958 BCAR3O75815 825 aa30.63■■■□□ 2.49
SDF2L1-201ENST00000248958 UFL1O94874 794 aa30.63■■■□□ 2.49
SDF2L1-201ENST00000248958 ZC3H12CQ9C0D7 883 aaKnown RBP30.63■■■□□ 2.49
SDF2L1-201ENST00000248958 HDAC5Q9UQL6 1122 aa30.63■■■□□ 2.49
SDF2L1-201ENST00000248958 POTECB2RU33 542 aa30.62■■■□□ 2.49
SDF2L1-201ENST00000248958 ATF7IPQ6VMQ6 1270 aa30.62■■■□□ 2.49
SDF2L1-201ENST00000248958 RBM46Q8TBY0 533 aaKnown RBP30.62■■■□□ 2.49
SDF2L1-201ENST00000248958 KAZALD1Q96I82 304 aa30.62■■■□□ 2.49
SDF2L1-201ENST00000248958 ANKRD2Q9GZV1 360 aa30.62■■■□□ 2.49
SDF2L1-201ENST00000248958 RABL6Q3YEC7 729 aaPredicted RBP30.61■■■□□ 2.49
SDF2L1-201ENST00000248958 TAF7LQ5H9L4 462 aa30.6■■■□□ 2.49
SDF2L1-201ENST00000248958 INTS3Q68E01 1043 aaKnown RBP30.6■■■□□ 2.49
SDF2L1-201ENST00000248958 FRAT1Q92837 279 aaPredicted RBP30.6■■■□□ 2.49
SDF2L1-201ENST00000248958 RIMBP2O15034 1052 aa30.59■■■□□ 2.49
SDF2L1-201ENST00000248958 LEMD3Q9Y2U8 911 aa30.59■■■□□ 2.49
SDF2L1-201ENST00000248958 GJA3Q9Y6H8 435 aa30.59■■■□□ 2.49
SDF2L1-201ENST00000248958 TNIP1Q15025 636 aa30.58■■■□□ 2.49
SDF2L1-201ENST00000248958 ZKSCAN2Q63HK3 967 aa30.58■■■□□ 2.49
SDF2L1-201ENST00000248958 BICC1Q9H694 974 aaKnown RBP30.58■■■□□ 2.49
SDF2L1-201ENST00000248958 TRIM27P14373 513 aa30.57■■■□□ 2.48
SDF2L1-201ENST00000248958 CXCL9Q07325 125 aa30.57■■■□□ 2.48
SDF2L1-201ENST00000248958 CIAPIN1Q6FI81 312 aa30.57■■■□□ 2.48
SDF2L1-201ENST00000248958 HACL1Q9UJ83 578 aa30.57■■■□□ 2.48
SDF2L1-201ENST00000248958 CEP350Q5VT06 3117 aa30.56■■■□□ 2.48
SDF2L1-201ENST00000248958 G3V3G9 751 aa30.56■■■□□ 2.48
SDF2L1-201ENST00000248958 UBTFL1P0CB47 393 aaPredicted RBP30.56■■■□□ 2.48
SDF2L1-201ENST00000248958 FSTL1Q12841 308 aa30.56■■■□□ 2.48
SDF2L1-201ENST00000248958 DCAF8Q5TAQ9 597 aa30.56■■■□□ 2.48
SDF2L1-201ENST00000248958 CHRNDQ07001 517 aa30.55■■■□□ 2.48
SDF2L1-201ENST00000248958 LDHAL6AQ6ZMR3 332 aa30.55■■■□□ 2.48
SDF2L1-201ENST00000248958 MED23Q9ULK4 1368 aa30.54■■■□□ 2.48
SDF2L1-201ENST00000248958 ECE2O60344 883 aa30.54■■■□□ 2.48
SDF2L1-201ENST00000248958 LMOD1P29536 600 aaPredicted RBP30.54■■■□□ 2.48
SDF2L1-201ENST00000248958 ANKRD44Q8N8A2 993 aa30.54■■■□□ 2.48
SDF2L1-201ENST00000248958 SMC1BQ8NDV3 1235 aa30.54■■■□□ 2.48
SDF2L1-201ENST00000248958 DBNDD1Q9H9R9 158 aa30.54■■■□□ 2.48
SDF2L1-201ENST00000248958 A0A1B0GUL6 1792 aa30.54■■■□□ 2.48
SDF2L1-201ENST00000248958 YDJCA8MPS7 323 aa30.53■■■□□ 2.48
SDF2L1-201ENST00000248958 GPR101Q96P66 508 aaPredicted RBP30.53■■■□□ 2.48
SDF2L1-201ENST00000248958 TAF1DQ9H5J8 278 aaPredicted RBP30.53■■■□□ 2.48
SDF2L1-201ENST00000248958 CNNM1Q9NRU3 951 aa30.53■■■□□ 2.48
SDF2L1-201ENST00000248958 ZNF804BA4D1E1 1349 aa30.52■■■□□ 2.48
SDF2L1-201ENST00000248958 ZNF594Q96JF6 807 aaPredicted RBP30.52■■■□□ 2.48
SDF2L1-201ENST00000248958 RAD17O75943 681 aa30.51■■■□□ 2.47
SDF2L1-201ENST00000248958 GNAI3P08754 354 aa30.51■■■□□ 2.47
SDF2L1-201ENST00000248958 DOK7Q18PE1 504 aa30.51■■■□□ 2.47
SDF2L1-201ENST00000248958 PNMA8AQ86V59 439 aaPredicted RBP30.51■■■□□ 2.47
SDF2L1-201ENST00000248958 EPHX2P34913 555 aa30.5■■■□□ 2.47
SDF2L1-201ENST00000248958 KCNJ4P48050 445 aa30.5■■■□□ 2.47
SDF2L1-201ENST00000248958 SCNN1DP51172 638 aa30.49■■■□□ 2.47
SDF2L1-201ENST00000248958 PODNQ7Z5L7 613 aa30.49■■■□□ 2.47
SDF2L1-201ENST00000248958 CLUAP1Q96AJ1 413 aa30.48■■■□□ 2.47
SDF2L1-201ENST00000248958 PSME4Q14997 1843 aa30.47■■■□□ 2.47
SDF2L1-201ENST00000248958 MEIS3Q99687 375 aa30.47■■■□□ 2.47
SDF2L1-201ENST00000248958 MROH5Q6ZUA9 1318 aa30.47■■■□□ 2.47
SDF2L1-201ENST00000248958 LDHDQ86WU2 507 aa30.46■■■□□ 2.47
SDF2L1-201ENST00000248958 FTSJ3Q8IY81 847 aaKnown RBP30.46■■■□□ 2.47
SDF2L1-201ENST00000248958 COA1Q9GZY4 146 aa30.46■■■□□ 2.47
SDF2L1-201ENST00000248958 GPRC5DQ9NZD1 345 aa30.46■■■□□ 2.47
SDF2L1-201ENST00000248958 PSMD14O00487 310 aa30.45■■■□□ 2.47
SDF2L1-201ENST00000248958 HSPA6P17066 643 aa30.45■■■□□ 2.47
SDF2L1-201ENST00000248958 GMPSP49915 693 aaPredicted RBP30.45■■■□□ 2.47
SDF2L1-201ENST00000248958 DZIP1LQ8IYY4 767 aaKnown RBP30.45■■■□□ 2.47
SDF2L1-201ENST00000248958 TNNQ9UQP3 1299 aa30.45■■■□□ 2.47
SDF2L1-201ENST00000248958 LRRFIP2Q9Y608 721 aaKnown RBP30.45■■■□□ 2.47
SDF2L1-201ENST00000248958 SCN9AQ15858 1988 aa30.45■■■□□ 2.46
SDF2L1-201ENST00000248958 TAF5LO75529 589 aa30.44■■■□□ 2.46
SDF2L1-201ENST00000248958 RPS12P25398 132 aaKnown RBP30.44■■■□□ 2.46
SDF2L1-201ENST00000248958 CHADLQ6NUI6 762 aa30.44■■■□□ 2.46
SDF2L1-201ENST00000248958 C15orf52Q6ZUT6 534 aaKnown RBP30.44■■■□□ 2.46
SDF2L1-201ENST00000248958 DPF2Q92785 391 aa30.44■■■□□ 2.46
SDF2L1-201ENST00000248958 RIPOR2Q9Y4F9 1068 aa30.44■■■□□ 2.46
SDF2L1-201ENST00000248958 WTIPA6NIX2 430 aaPredicted RBP30.43■■■□□ 2.46
SDF2L1-201ENST00000248958 EAPPQ56P03 285 aaPredicted RBP30.43■■■□□ 2.46
SDF2L1-201ENST00000248958 USP50Q70EL3 339 aaPredicted RBP30.43■■■□□ 2.46
SDF2L1-201ENST00000248958 TMEM57Q8N5G2 664 aa30.43■■■□□ 2.46
SDF2L1-201ENST00000248958 HELBQ8NG08 1087 aaPredicted RBP30.43■■■□□ 2.46
SDF2L1-201ENST00000248958 ADAMTSL1Q8N6G6 1762 aa30.42■■■□□ 2.46
SDF2L1-201ENST00000248958 VIL1P09327 827 aaKnown RBP30.42■■■□□ 2.46
SDF2L1-201ENST00000248958 MS4A1P11836 297 aa30.42■■■□□ 2.46
SDF2L1-201ENST00000248958 EPS15P42566 896 aa30.42■■■□□ 2.46
SDF2L1-201ENST00000248958 PUS3Q9BZE2 481 aaKnown RBP30.42■■■□□ 2.46
SDF2L1-201ENST00000248958 ADARB2Q9NS39 739 aaKnown RBP30.42■■■□□ 2.46
SDF2L1-201ENST00000248958 FBXO3Q9UK99 471 aa30.42■■■□□ 2.46
SDF2L1-201ENST00000248958 PLIN1O60240 522 aa30.41■■■□□ 2.46
SDF2L1-201ENST00000248958 RFX5P48382 616 aaPredicted RBP30.41■■■□□ 2.46
SDF2L1-201ENST00000248958 UBE4AQ14139 1066 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms