RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 PODXL2Q9NZ53 605 aa20.72■□□□□ 0.91
CLPP-201ENST00000245816 PGAP2Q9UHJ9 254 aa20.72■□□□□ 0.91
CLPP-201ENST00000245816 H7C1W4 665 aa20.71■□□□□ 0.91
CLPP-201ENST00000245816 PSMD14O00487 310 aa20.71■□□□□ 0.91
CLPP-201ENST00000245816 TTLL11Q8NHH1 800 aa20.71■□□□□ 0.91
CLPP-201ENST00000245816 MYH16Q9H6N6 1097 aa20.71■□□□□ 0.91
CLPP-201ENST00000245816 ADARB2Q9NS39 739 aaKnown RBP20.71■□□□□ 0.91
CLPP-201ENST00000245816 ZNF521Q96K83 1311 aa20.71■□□□□ 0.91
CLPP-201ENST00000245816 DDX58O95786 925 aaKnown RBP20.7■□□□□ 0.9
CLPP-201ENST00000245816 C6orf229H3BNL8 230 aa20.69■□□□□ 0.9
CLPP-201ENST00000245816 FLIIQ13045 1269 aa20.69■□□□□ 0.9
CLPP-201ENST00000245816 GREM2Q9H772 168 aa20.69■□□□□ 0.9
CLPP-201ENST00000245816 CNOT7Q9UIV1 285 aaKnown RBP20.69■□□□□ 0.9
CLPP-201ENST00000245816 RASSF10A6NK89 507 aa20.68■□□□□ 0.9
CLPP-201ENST00000245816 ECE2O60344 883 aa20.68■□□□□ 0.9
CLPP-201ENST00000245816 CTSWP56202 376 aa20.68■□□□□ 0.9
CLPP-201ENST00000245816 CCDC152Q4G0S7 254 aa20.68■□□□□ 0.9
CLPP-201ENST00000245816 GLIS2Q9BZE0 524 aaPredicted RBP20.68■□□□□ 0.9
CLPP-201ENST00000245816 TNIP1Q15025 636 aa20.67■□□□□ 0.9
CLPP-201ENST00000245816 SAMD7Q7Z3H4 446 aa20.67■□□□□ 0.9
CLPP-201ENST00000245816 STK31Q9BXU1 1019 aa20.67■□□□□ 0.9
CLPP-201ENST00000245816 GCKRQ14397 625 aa20.66■□□□□ 0.9
CLPP-201ENST00000245816 MICALL2Q8IY33 904 aa20.66■□□□□ 0.9
CLPP-201ENST00000245816 F6X3S4 739 aa20.65■□□□□ 0.9
CLPP-201ENST00000245816 FOXN1O15353 648 aa20.65■□□□□ 0.9
CLPP-201ENST00000245816 UFL1O94874 794 aa20.65■□□□□ 0.9
CLPP-201ENST00000245816 UBE3BQ7Z3V4 1068 aa20.65■□□□□ 0.9
CLPP-201ENST00000245816 BCL2L13Q9BXK5 485 aa20.65■□□□□ 0.9
CLPP-201ENST00000245816 CACNA1FO60840 1977 aa20.65■□□□□ 0.9
CLPP-201ENST00000245816 DEFB115Q30KQ5 88 aa20.64■□□□□ 0.89
CLPP-201ENST00000245816 DNAAF4Q8WXU2 420 aa20.64■□□□□ 0.89
CLPP-201ENST00000245816 DPF2Q92785 391 aa20.64■□□□□ 0.89
CLPP-201ENST00000245816 MINPP1Q9UNW1 487 aa20.64■□□□□ 0.89
CLPP-201ENST00000245816 TRPM7Q96QT4 1865 aa20.64■□□□□ 0.89
CLPP-201ENST00000245816 SPEF2Q9C093 1822 aa20.64■□□□□ 0.89
CLPP-201ENST00000245816 MYH3P11055 1940 aa20.63■□□□□ 0.89
CLPP-201ENST00000245816 ASTN2O75129 1339 aaPredicted RBP20.63■□□□□ 0.89
CLPP-201ENST00000245816 ZNF646O15015 1829 aaPredicted RBP20.63■□□□□ 0.89
CLPP-201ENST00000245816 CSF1RP07333 972 aa20.63■□□□□ 0.89
CLPP-201ENST00000245816 VIL1P09327 827 aaKnown RBP20.63■□□□□ 0.89
CLPP-201ENST00000245816 ANKRD18AQ8IVF6 992 aa20.63■□□□□ 0.89
CLPP-201ENST00000245816 PLA2G12BQ9BX93 195 aa20.63■□□□□ 0.89
CLPP-201ENST00000245816 GGA1Q9UJY5 639 aa20.63■□□□□ 0.89
CLPP-201ENST00000245816 E9PSI1 815 aa20.62■□□□□ 0.89
CLPP-201ENST00000245816 FKBP5Q13451 457 aaPredicted RBP20.62■□□□□ 0.89
CLPP-201ENST00000245816 TBC1D10BQ4KMP7 808 aaPredicted RBP20.62■□□□□ 0.89
CLPP-201ENST00000245816 TXNRD3Q86VQ6 643 aa20.62■□□□□ 0.89
CLPP-201ENST00000245816 EYA3Q99504 573 aa20.62■□□□□ 0.89
CLPP-201ENST00000245816 ANKIB1Q9P2G1 1089 aa20.62■□□□□ 0.89
CLPP-201ENST00000245816 WDR33Q9C0J8 1336 aaKnown RBP20.61■□□□□ 0.89
CLPP-201ENST00000245816 NEXNQ0ZGT2 675 aa20.61■□□□□ 0.89
CLPP-201ENST00000245816 EPHA10Q5JZY3 1008 aa20.61■□□□□ 0.89
CLPP-201ENST00000245816 BEND3Q5T5X7 828 aa20.61■□□□□ 0.89
CLPP-201ENST00000245816 GMLQ99445 158 aa20.61■□□□□ 0.89
CLPP-201ENST00000245816 ZC3H12CQ9C0D7 883 aaKnown RBP20.61■□□□□ 0.89
CLPP-201ENST00000245816 BSDC1Q9NW68 430 aaPredicted RBP20.61■□□□□ 0.89
CLPP-201ENST00000245816 WBP1LQ9NX94 342 aa20.61■□□□□ 0.89
CLPP-201ENST00000245816 TLL2Q9Y6L7 1015 aa20.61■□□□□ 0.89
CLPP-201ENST00000245816 POLR2AP24928 1970 aaKnown RBP20.61■□□□□ 0.89
CLPP-201ENST00000245816 XDHP47989 1333 aa20.6■□□□□ 0.89
CLPP-201ENST00000245816 KLRK1P26718 216 aa20.6■□□□□ 0.89
CLPP-201ENST00000245816 FOXO4P98177 505 aa20.6■□□□□ 0.89
CLPP-201ENST00000245816 FAM161AQ3B820 660 aa20.6■□□□□ 0.89
CLPP-201ENST00000245816 CYP4F22Q6NT55 531 aa20.6■□□□□ 0.89
CLPP-201ENST00000245816 LINS1Q8NG48 757 aa20.6■□□□□ 0.89
CLPP-201ENST00000245816 ZC3H15Q8WU90 426 aaKnown RBP20.6■□□□□ 0.89
CLPP-201ENST00000245816 ABT1Q9ULW3 272 aaKnown RBP20.6■□□□□ 0.89
CLPP-201ENST00000245816 HSP90B1P14625 803 aaKnown RBP20.59■□□□□ 0.89
CLPP-201ENST00000245816 USP48Q86UV5 1035 aa20.59■□□□□ 0.89
CLPP-201ENST00000245816 MXD3Q9BW11 206 aa20.59■□□□□ 0.89
CLPP-201ENST00000245816 PSME4Q14997 1843 aa20.59■□□□□ 0.89
CLPP-201ENST00000245816 THSD7BQ9C0I4 1608 aa20.59■□□□□ 0.89
CLPP-201ENST00000245816 H7C1D1 291 aa20.58■□□□□ 0.89
CLPP-201ENST00000245816 SNAP23O00161 211 aa20.58■□□□□ 0.89
CLPP-201ENST00000245816 CELF2O95319 508 aaKnown RBP20.58■□□□□ 0.89
CLPP-201ENST00000245816 ATP2B4P23634 1241 aa20.58■□□□□ 0.89
CLPP-201ENST00000245816 RBM26Q5T8P6 1007 aaKnown RBP20.58■□□□□ 0.89
CLPP-201ENST00000245816 IRS2Q9Y4H2 1338 aa20.57■□□□□ 0.88
CLPP-201ENST00000245816 ITGA6P23229 1130 aa20.57■□□□□ 0.88
CLPP-201ENST00000245816 SLFN5Q08AF3 891 aa20.57■□□□□ 0.88
CLPP-201ENST00000245816 SAPCD2Q86UD0 394 aa20.57■□□□□ 0.88
CLPP-201ENST00000245816 CDC5LQ99459 802 aaKnown RBP20.57■□□□□ 0.88
CLPP-201ENST00000245816 ZNF609O15014 1411 aa20.56■□□□□ 0.88
CLPP-201ENST00000245816 ADM5C9JUS6 153 aa20.56■□□□□ 0.88
CLPP-201ENST00000245816 AOC2O75106 756 aa20.56■□□□□ 0.88
CLPP-201ENST00000245816 RPS12P25398 132 aaKnown RBP20.56■□□□□ 0.88
CLPP-201ENST00000245816 CCT4P50991 539 aaKnown RBP20.56■□□□□ 0.88
CLPP-201ENST00000245816 RSBN1LQ6PCB5 846 aaPredicted RBP20.56■□□□□ 0.88
CLPP-201ENST00000245816 TRMT2AQ8IZ69 625 aaKnown RBP20.56■□□□□ 0.88
CLPP-201ENST00000245816 CAPNS2Q96L46 248 aa20.56■□□□□ 0.88
CLPP-201ENST00000245816 ZNF280AP59817 542 aaPredicted RBP20.55■□□□□ 0.88
CLPP-201ENST00000245816 CDC37L1Q7L3B6 337 aa20.55■□□□□ 0.88
CLPP-201ENST00000245816 KAZALD1Q96I82 304 aa20.55■□□□□ 0.88
CLPP-201ENST00000245816 ZIC5Q96T25 663 aa20.55■□□□□ 0.88
CLPP-201ENST00000245816 MED23Q9ULK4 1368 aa20.55■□□□□ 0.88
CLPP-201ENST00000245816 CT47B1P0C2W7 299 aaPredicted RBP20.53■□□□□ 0.88
CLPP-201ENST00000245816 KIF4BQ2VIQ3 1234 aa20.53■□□□□ 0.88
CLPP-201ENST00000245816 DACT2Q5SW24 774 aa20.53■□□□□ 0.88
CLPP-201ENST00000245816 TNS4Q8IZW8 715 aa20.53■□□□□ 0.88
CLPP-201ENST00000245816 ZNF408Q9H9D4 720 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms