RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 MCMDC2Q4G0Z9 681 aa17.06■□□□□ 0.32
HIF3A-202ENST00000244303 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
HIF3A-202ENST00000244303 UBR2Q8IWV8 1755 aa17.06■□□□□ 0.32
HIF3A-202ENST00000244303 A1BGP04217 495 aa17.05■□□□□ 0.32
HIF3A-202ENST00000244303 CYP21A2P08686 494 aa17.05■□□□□ 0.32
HIF3A-202ENST00000244303 FOXO4P98177 505 aa17.05■□□□□ 0.32
HIF3A-202ENST00000244303 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
HIF3A-202ENST00000244303 GTF3C6Q969F1 213 aa17.05■□□□□ 0.32
HIF3A-202ENST00000244303 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
HIF3A-202ENST00000244303 LIG1P18858 919 aa17.05■□□□□ 0.32
HIF3A-202ENST00000244303 Q6ZUG5 572 aa17.05■□□□□ 0.32
HIF3A-202ENST00000244303 ZNF830Q96NB3 372 aaPredicted RBP17.05■□□□□ 0.32
HIF3A-202ENST00000244303 JAK2O60674 1132 aa17.04■□□□□ 0.32
HIF3A-202ENST00000244303 RBM10P98175 930 aaKnown RBP17.04■□□□□ 0.32
HIF3A-202ENST00000244303 TTLL7Q6ZT98 887 aa17.04■□□□□ 0.32
HIF3A-202ENST00000244303 KBTBD3Q8NAB2 608 aa17.04■□□□□ 0.32
HIF3A-202ENST00000244303 KCPQ6ZWJ8 1503 aa17.04■□□□□ 0.32
HIF3A-202ENST00000244303 H7C1W4 665 aa17.04■□□□□ 0.32
HIF3A-202ENST00000244303 ATG9AQ7Z3C6 839 aa17.04■□□□□ 0.32
HIF3A-202ENST00000244303 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
HIF3A-202ENST00000244303 TFIP11Q9UBB9 837 aaKnown RBP17.04■□□□□ 0.32
HIF3A-202ENST00000244303 MYH15Q9Y2K3 1946 aa17.03■□□□□ 0.32
HIF3A-202ENST00000244303 CCDC192P0DO97 292 aa17.03■□□□□ 0.32
HIF3A-202ENST00000244303 HSP90B1P14625 803 aaKnown RBP17.03■□□□□ 0.32
HIF3A-202ENST00000244303 PLCB2Q00722 1185 aa17.03■□□□□ 0.32
HIF3A-202ENST00000244303 SPATA32Q96LK8 384 aa17.03■□□□□ 0.32
HIF3A-202ENST00000244303 SCAND2PQ9GZW5 306 aaPredicted RBP17.03■□□□□ 0.32
HIF3A-202ENST00000244303 SH3TC1Q8TE82 1336 aa17.03■□□□□ 0.32
HIF3A-202ENST00000244303 NHSL1Q5SYE7 1610 aa17.03■□□□□ 0.32
HIF3A-202ENST00000244303 SHANK3Q9BYB0 1731 aa17.03■□□□□ 0.32
HIF3A-202ENST00000244303 AP5Z1O43299 807 aa17.03■□□□□ 0.32
HIF3A-202ENST00000244303 NUP62CLQ9H1M0 184 aa17.03■□□□□ 0.32
HIF3A-202ENST00000244303 PALLDQ8WX93 1383 aa17.02■□□□□ 0.32
HIF3A-202ENST00000244303 GOLIM4O00461 696 aa17.02■□□□□ 0.32
HIF3A-202ENST00000244303 CAMK4Q16566 473 aa17.02■□□□□ 0.32
HIF3A-202ENST00000244303 SLFNL1Q499Z3 407 aa17.02■□□□□ 0.32
HIF3A-202ENST00000244303 STOX1Q6ZVD7 989 aa17.02■□□□□ 0.32
HIF3A-202ENST00000244303 LRRC2Q9BYS8 371 aa17.02■□□□□ 0.32
HIF3A-202ENST00000244303 TTC12Q9H892 705 aaPredicted RBP17.02■□□□□ 0.32
HIF3A-202ENST00000244303 CWC25Q9NXE8 425 aaPredicted RBP17.02■□□□□ 0.32
HIF3A-202ENST00000244303 TIMM10P62072 90 aa17.01■□□□□ 0.31
HIF3A-202ENST00000244303 MAP3K11Q16584 847 aa17.01■□□□□ 0.31
HIF3A-202ENST00000244303 LEO1Q8WVC0 666 aaPredicted RBP17.01■□□□□ 0.31
HIF3A-202ENST00000244303 PAG1Q9NWQ8 432 aa17.01■□□□□ 0.31
HIF3A-202ENST00000244303 PAPPAQ13219 1627 aa17.01■□□□□ 0.31
HIF3A-202ENST00000244303 BRF1Q92994 677 aa17.01■□□□□ 0.31
HIF3A-202ENST00000244303 FAM13BQ9NYF5 915 aa17.01■□□□□ 0.31
HIF3A-202ENST00000244303 TNS2Q63HR2 1409 aa17.01■□□□□ 0.31
HIF3A-202ENST00000244303 UQCRHLA0A096LP55 91 aa17■□□□□ 0.31
HIF3A-202ENST00000244303 GOLGA6L4A6NEF3 574 aa17■□□□□ 0.31
HIF3A-202ENST00000244303 UQCRHP07919 91 aa17■□□□□ 0.31
HIF3A-202ENST00000244303 DACT1Q9NYF0 836 aa17■□□□□ 0.31
HIF3A-202ENST00000244303 SCRN1Q12765 414 aa17■□□□□ 0.31
HIF3A-202ENST00000244303 LRRC24Q50LG9 513 aa17■□□□□ 0.31
HIF3A-202ENST00000244303 DDX11Q96FC9 970 aa17■□□□□ 0.31
HIF3A-202ENST00000244303 ZBTB3Q9H5J0 574 aa17■□□□□ 0.31
HIF3A-202ENST00000244303 BTG4Q9NY30 223 aa17■□□□□ 0.31
HIF3A-202ENST00000244303 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
HIF3A-202ENST00000244303 IL15P40933 162 aaPredicted RBP16.99■□□□□ 0.31
HIF3A-202ENST00000244303 RESTQ13127 1097 aa16.99■□□□□ 0.31
HIF3A-202ENST00000244303 PIBF1Q8WXW3 757 aa16.99■□□□□ 0.31
HIF3A-202ENST00000244303 ZNF594Q96JF6 807 aaPredicted RBP16.99■□□□□ 0.31
HIF3A-202ENST00000244303 HELLSQ9NRZ9 838 aa16.99■□□□□ 0.31
HIF3A-202ENST00000244303 FGD1P98174 961 aa16.99■□□□□ 0.31
HIF3A-202ENST00000244303 TYRO3Q06418 890 aa16.99■□□□□ 0.31
HIF3A-202ENST00000244303 CKAP2LQ8IYA6 745 aa16.99■□□□□ 0.31
HIF3A-202ENST00000244303 TNMDQ9H2S6 317 aa16.99■□□□□ 0.31
HIF3A-202ENST00000244303 GPR108Q9NPR9 543 aa16.99■□□□□ 0.31
HIF3A-202ENST00000244303 MRVI1Q9Y6F6 885 aa16.99■□□□□ 0.31
HIF3A-202ENST00000244303 H3BQV1 296 aa16.98■□□□□ 0.31
HIF3A-202ENST00000244303 IFFO2Q5TF58 517 aa16.98■□□□□ 0.31
HIF3A-202ENST00000244303 SASS6Q6UVJ0 657 aa16.98■□□□□ 0.31
HIF3A-202ENST00000244303 FAM200AQ8TCP9 573 aa16.98■□□□□ 0.31
HIF3A-202ENST00000244303 SPEF2Q9C093 1822 aa16.98■□□□□ 0.31
HIF3A-202ENST00000244303 DHX32Q7L7V1 743 aaKnown RBP16.98■□□□□ 0.31
HIF3A-202ENST00000244303 PGBD1Q96JS3 809 aa16.98■□□□□ 0.31
HIF3A-202ENST00000244303 DSCC1Q9BVC3 393 aa16.98■□□□□ 0.31
HIF3A-202ENST00000244303 A0A0G2JLW4 131 aa16.97■□□□□ 0.31
HIF3A-202ENST00000244303 EYA2O00167 538 aa16.97■□□□□ 0.31
HIF3A-202ENST00000244303 HMGB1P09429 215 aaKnown RBP16.97■□□□□ 0.31
HIF3A-202ENST00000244303 NOLC1Q14978 699 aaKnown RBP eCLIP16.97■□□□□ 0.31
HIF3A-202ENST00000244303 ZMYM1Q5SVZ6 1142 aa16.97■□□□□ 0.31
HIF3A-202ENST00000244303 CCDC191Q8NCU4 936 aa16.97■□□□□ 0.31
HIF3A-202ENST00000244303 SMARCC2Q8TAQ2 1214 aa16.97■□□□□ 0.31
HIF3A-202ENST00000244303 DDX19AQ9NUU7 478 aaKnown RBP16.97■□□□□ 0.31
HIF3A-202ENST00000244303 TOGARAM1Q9Y4F4 1720 aa16.97■□□□□ 0.31
HIF3A-202ENST00000244303 PFKFB2O60825 505 aa16.96■□□□□ 0.31
HIF3A-202ENST00000244303 NR1I2O75469 434 aa16.96■□□□□ 0.31
HIF3A-202ENST00000244303 IFIT1P09914 478 aaKnown RBP16.96■□□□□ 0.31
HIF3A-202ENST00000244303 DNTTIP2Q5QJE6 756 aaKnown RBP16.96■□□□□ 0.31
HIF3A-202ENST00000244303 C17orf53Q8N3J3 647 aaPredicted RBP16.96■□□□□ 0.31
HIF3A-202ENST00000244303 PIGBQ92521 554 aa16.96■□□□□ 0.31
HIF3A-202ENST00000244303 ASAP1Q9ULH1 1129 aa16.96■□□□□ 0.31
HIF3A-202ENST00000244303 A0A1B0GUL7 405 aa16.96■□□□□ 0.31
HIF3A-202ENST00000244303 APOBRQ0VD83 1088 aa16.96■□□□□ 0.31
HIF3A-202ENST00000244303 BICD2Q8TD16 824 aa16.96■□□□□ 0.31
HIF3A-202ENST00000244303 CLSTN2Q9H4D0 955 aa16.96■□□□□ 0.31
HIF3A-202ENST00000244303 ZSCAN16Q9H4T2 348 aaPredicted RBP16.96■□□□□ 0.31
HIF3A-202ENST00000244303 MAST3O60307 1309 aa16.96■□□□□ 0.3
HIF3A-202ENST00000244303 HSPD1P10809 573 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms