RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 COL23A1Q86Y22 540 aaPredicted RBP15.27■□□□□ 0.03
SNAI1-201ENST00000244050 KLHDC4Q8TBB5 520 aa15.27■□□□□ 0.03
SNAI1-201ENST00000244050 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.27■□□□□ 0.03
SNAI1-201ENST00000244050 ERVV-1B6SEH8 477 aa15.26■□□□□ 0.03
SNAI1-201ENST00000244050 EIF5P55010 431 aaKnown RBP15.26■□□□□ 0.03
SNAI1-201ENST00000244050 GPR162Q16538 588 aa15.26■□□□□ 0.03
SNAI1-201ENST00000244050 RASEFQ8IZ41 740 aa15.26■□□□□ 0.03
SNAI1-201ENST00000244050 KLHL34Q8N239 644 aa15.26■□□□□ 0.03
SNAI1-201ENST00000244050 PCCAP05165 728 aaPredicted RBP15.25■□□□□ 0.03
SNAI1-201ENST00000244050 GPTP24298 496 aa15.25■□□□□ 0.03
SNAI1-201ENST00000244050 PTPN12Q05209 780 aaKnown RBP15.25■□□□□ 0.03
SNAI1-201ENST00000244050 GAS2L3Q86XJ1 694 aa15.25■□□□□ 0.03
SNAI1-201ENST00000244050 FAM43AQ8N2R8 423 aa15.25■□□□□ 0.03
SNAI1-201ENST00000244050 TM6SF1Q9BZW5 370 aa15.25■□□□□ 0.03
SNAI1-201ENST00000244050 CCDC8Q9H0W5 538 aaPredicted RBP15.25■□□□□ 0.03
SNAI1-201ENST00000244050 ZBTB38Q8NAP3 1195 aaPredicted RBP15.25■□□□□ 0.03
SNAI1-201ENST00000244050 FAM89AQ96GI7 184 aa15.25■□□□□ 0.03
SNAI1-201ENST00000244050 MYH3P11055 1940 aa15.24■□□□□ 0.03
SNAI1-201ENST00000244050 PTH1RQ03431 593 aa15.24■□□□□ 0.03
SNAI1-201ENST00000244050 NECTIN1Q15223 517 aa15.24■□□□□ 0.03
SNAI1-201ENST00000244050 NLRP10Q86W26 655 aa15.24■□□□□ 0.03
SNAI1-201ENST00000244050 PANK2Q9BZ23 570 aa15.24■□□□□ 0.03
SNAI1-201ENST00000244050 LIMCH1Q9UPQ0 1083 aa15.24■□□□□ 0.03
SNAI1-201ENST00000244050 ZNF445P59923 1031 aa15.23■□□□□ 0.03
SNAI1-201ENST00000244050 C1QTNF8P60827 252 aa15.23■□□□□ 0.03
SNAI1-201ENST00000244050 TLR7Q9NYK1 1049 aaKnown RBP15.23■□□□□ 0.03
SNAI1-201ENST00000244050 CCDC171Q6TFL3 1326 aa15.23■□□□□ 0.03
SNAI1-201ENST00000244050 BCORQ6W2J9 1755 aa15.23■□□□□ 0.03
SNAI1-201ENST00000244050 PRPF40AO75400 957 aaKnown RBP15.22■□□□□ 0.03
SNAI1-201ENST00000244050 YBX3P16989 372 aaKnown RBP eCLIP15.22■□□□□ 0.03
SNAI1-201ENST00000244050 AK2P54819 239 aa15.22■□□□□ 0.03
SNAI1-201ENST00000244050 NOL8Q76FK4 1167 aaKnown RBP15.22■□□□□ 0.03
SNAI1-201ENST00000244050 LINC00116Q8NCU8 138 aa15.22■□□□□ 0.03
SNAI1-201ENST00000244050 MAP4K1Q92918 833 aa15.22■□□□□ 0.03
SNAI1-201ENST00000244050 ZSWIM6Q9HCJ5 1215 aa15.22■□□□□ 0.03
SNAI1-201ENST00000244050 CDHR2Q9BYE9 1310 aa15.22■□□□□ 0.03
SNAI1-201ENST00000244050 ATP5JP18859 108 aa15.22■□□□□ 0.03
SNAI1-201ENST00000244050 TNNI3KQ59H18 835 aa15.22■□□□□ 0.03
SNAI1-201ENST00000244050 VPS53Q5VIR6 699 aa15.22■□□□□ 0.03
SNAI1-201ENST00000244050 MSL1Q68DK7 614 aa15.22■□□□□ 0.03
SNAI1-201ENST00000244050 RUFY3Q7L099 469 aa15.22■□□□□ 0.03
SNAI1-201ENST00000244050 BOLA2Q9H3K6 86 aa15.22■□□□□ 0.03
SNAI1-201ENST00000244050 RTN4Q9NQC3 1192 aaKnown RBP15.22■□□□□ 0.03
SNAI1-201ENST00000244050 FPGT-TNNI3KV9GXZ4 949 aa15.22■□□□□ 0.03
SNAI1-201ENST00000244050 NMIQ13287 307 aaPredicted RBP15.21■□□□□ 0.03
SNAI1-201ENST00000244050 PRPF40BQ6NWY9 871 aaKnown RBP15.21■□□□□ 0.03
SNAI1-201ENST00000244050 AMIGO3Q86WK7 504 aa15.21■□□□□ 0.03
SNAI1-201ENST00000244050 PLA2G12BQ9BX93 195 aa15.21■□□□□ 0.03
SNAI1-201ENST00000244050 TRMT112Q9UI30 125 aaKnown RBP15.21■□□□□ 0.03
SNAI1-201ENST00000244050 WDR33Q9C0J8 1336 aaKnown RBP15.21■□□□□ 0.02
SNAI1-201ENST00000244050 CAMTA2O94983 1202 aa15.2■□□□□ 0.02
SNAI1-201ENST00000244050 ZKSCAN1P17029 563 aaPredicted RBP15.2■□□□□ 0.02
SNAI1-201ENST00000244050 CASTP20810 708 aaKnown RBP15.2■□□□□ 0.02
SNAI1-201ENST00000244050 TFCP2Q12800 502 aa15.2■□□□□ 0.02
SNAI1-201ENST00000244050 CCDC57Q2TAC2 916 aa15.2■□□□□ 0.02
SNAI1-201ENST00000244050 ZNF34Q8IZ26 560 aa15.2■□□□□ 0.02
SNAI1-201ENST00000244050 ZSCAN31Q96LW9 406 aaPredicted RBP15.2■□□□□ 0.02
SNAI1-201ENST00000244050 FAM227BQ96M60 508 aa15.2■□□□□ 0.02
SNAI1-201ENST00000244050 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.2■□□□□ 0.02
SNAI1-201ENST00000244050 UBN2Q6ZU65 1347 aa15.2■□□□□ 0.02
SNAI1-201ENST00000244050 CNTNAP4Q9C0A0 1308 aa15.2■□□□□ 0.02
SNAI1-201ENST00000244050 TAF1LQ8IZX4 1826 aa15.2■□□□□ 0.02
SNAI1-201ENST00000244050 RFX7Q2KHR2 1363 aa15.2■□□□□ 0.02
SNAI1-201ENST00000244050 MED23Q9ULK4 1368 aa15.2■□□□□ 0.02
SNAI1-201ENST00000244050 CREB3L3Q68CJ9 461 aa15.19■□□□□ 0.02
SNAI1-201ENST00000244050 GPT2Q8TD30 523 aa15.19■□□□□ 0.02
SNAI1-201ENST00000244050 FSD1Q9BTV5 496 aa15.19■□□□□ 0.02
SNAI1-201ENST00000244050 PDRG1Q9NUG6 133 aa15.19■□□□□ 0.02
SNAI1-201ENST00000244050 DBNLQ9UJU6 430 aaKnown RBP15.19■□□□□ 0.02
SNAI1-201ENST00000244050 RBM8AQ9Y5S9 174 aaKnown RBP15.19■□□□□ 0.02
SNAI1-201ENST00000244050 CYP46A1Q9Y6A2 500 aa15.19■□□□□ 0.02
SNAI1-201ENST00000244050 IRS4O14654 1257 aaPredicted RBP15.19■□□□□ 0.02
SNAI1-201ENST00000244050 MBD3O95983 291 aa15.19■□□□□ 0.02
SNAI1-201ENST00000244050 ADCK5Q3MIX3 580 aa15.19■□□□□ 0.02
SNAI1-201ENST00000244050 ZSCAN23Q3MJ62 389 aa15.19■□□□□ 0.02
SNAI1-201ENST00000244050 CAVIN1Q6NZI2 390 aaKnown RBP15.19■□□□□ 0.02
SNAI1-201ENST00000244050 SYNE4Q8N205 404 aa15.19■□□□□ 0.02
SNAI1-201ENST00000244050 JAKMIP1Q96N16 626 aaKnown RBP15.19■□□□□ 0.02
SNAI1-201ENST00000244050 SH2B1Q9NRF2 756 aaPredicted RBP15.19■□□□□ 0.02
SNAI1-201ENST00000244050 A0A0D9SFI3 127 aa15.18■□□□□ 0.02
SNAI1-201ENST00000244050 NCLP19338 710 aaKnown RBP15.18■□□□□ 0.02
SNAI1-201ENST00000244050 PSMA5P28066 241 aa15.18■□□□□ 0.02
SNAI1-201ENST00000244050 TSGA10IPQ3SY00 556 aa15.18■□□□□ 0.02
SNAI1-201ENST00000244050 SMIM5Q71RC9 77 aa15.18■□□□□ 0.02
SNAI1-201ENST00000244050 TICAM2Q86XR7 235 aa15.18■□□□□ 0.02
SNAI1-201ENST00000244050 ZNF594Q96JF6 807 aaPredicted RBP15.18■□□□□ 0.02
SNAI1-201ENST00000244050 CCDC85AQ96PX6 553 aaPredicted RBP15.18■□□□□ 0.02
SNAI1-201ENST00000244050 ALDH8A1Q9H2A2 487 aaPredicted RBP15.18■□□□□ 0.02
SNAI1-201ENST00000244050 GPR108Q9NPR9 543 aa15.18■□□□□ 0.02
SNAI1-201ENST00000244050 ZNF652Q9Y2D9 606 aa15.18■□□□□ 0.02
SNAI1-201ENST00000244050 SCN7AQ01118 1682 aa15.17■□□□□ 0.02
SNAI1-201ENST00000244050 EYA2O00167 538 aa15.17■□□□□ 0.02
SNAI1-201ENST00000244050 CSF1RP07333 972 aa15.17■□□□□ 0.02
SNAI1-201ENST00000244050 IL15P40933 162 aaPredicted RBP15.17■□□□□ 0.02
SNAI1-201ENST00000244050 IFIT5Q13325 482 aaKnown RBP15.17■□□□□ 0.02
SNAI1-201ENST00000244050 PARP10Q53GL7 1025 aa15.17■□□□□ 0.02
SNAI1-201ENST00000244050 TAF7LQ5H9L4 462 aa15.17■□□□□ 0.02
SNAI1-201ENST00000244050 RNF20Q5VTR2 975 aa15.17■□□□□ 0.02
SNAI1-201ENST00000244050 RPAP1Q9BWH6 1393 aaPredicted RBP15.17■□□□□ 0.02
SNAI1-201ENST00000244050 C4BP0C0L5 1744 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms