RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CHRNDQ07001 517 aa13.56□□□□□ -0.24
TNFAIP3-201ENST00000237289 LRRC24Q50LG9 513 aa13.56□□□□□ -0.24
TNFAIP3-201ENST00000237289 C21orf2O43822 256 aa13.56□□□□□ -0.24
TNFAIP3-201ENST00000237289 CCDC93Q567U6 631 aa13.56□□□□□ -0.24
TNFAIP3-201ENST00000237289 CD2APQ9Y5K6 639 aa13.56□□□□□ -0.24
TNFAIP3-201ENST00000237289 C4BP0C0L5 1744 aa13.56□□□□□ -0.24
TNFAIP3-201ENST00000237289 ATP2B4P23634 1241 aa13.56□□□□□ -0.24
TNFAIP3-201ENST00000237289 PUS3Q9BZE2 481 aaKnown RBP13.56□□□□□ -0.24
TNFAIP3-201ENST00000237289 ADAMTS7Q9UKP4 1686 aa13.56□□□□□ -0.24
TNFAIP3-201ENST00000237289 CSF1RP07333 972 aa13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 STYK1Q6J9G0 422 aa13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 PTPN12Q05209 780 aaKnown RBP13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 RABL6Q3YEC7 729 aaPredicted RBP13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 LARGE2Q8N3Y3 721 aa13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 XDHP47989 1333 aa13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 MTX1Q13505 466 aa13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 CIAO1O76071 339 aa13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 UQCRFS1P1P0C7P4 283 aa13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 MX1P20591 662 aa13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 PRPF40BQ6NWY9 871 aaKnown RBP13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 RTKN2Q8IZC4 609 aa13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 LPIN2Q92539 896 aa13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 ABCF2Q9UG63 623 aa13.55□□□□□ -0.24
TNFAIP3-201ENST00000237289 IBTKQ9P2D0 1353 aaPredicted RBP13.54□□□□□ -0.24
TNFAIP3-201ENST00000237289 TIMM10P62072 90 aa13.54□□□□□ -0.24
TNFAIP3-201ENST00000237289 A0A1B0GUL7 405 aa13.54□□□□□ -0.24
TNFAIP3-201ENST00000237289 KIAA1211Q6ZU35 1233 aa13.54□□□□□ -0.24
TNFAIP3-201ENST00000237289 SRGNP10124 158 aa13.54□□□□□ -0.24
TNFAIP3-201ENST00000237289 CNTROBQ8N137 903 aa13.54□□□□□ -0.24
TNFAIP3-201ENST00000237289 DIAPH3Q9NSV4 1193 aa13.54□□□□□ -0.24
TNFAIP3-201ENST00000237289 LRP2BPQ9P2M1 347 aa13.54□□□□□ -0.24
TNFAIP3-201ENST00000237289 LEMD3Q9Y2U8 911 aa13.54□□□□□ -0.24
TNFAIP3-201ENST00000237289 PPIP5K2O43314 1243 aa13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 GLRX3O76003 335 aaKnown RBP13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 FSD1Q9BTV5 496 aa13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 ECHDC1Q9NTX5 307 aa13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 PDE8BO95263 885 aa13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 BOLA2Q9H3K6 86 aa13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 HIBADHP31937 336 aaKnown RBP13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 TNNI3KQ59H18 835 aa13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 IQSEC3Q9UPP2 1182 aaPredicted RBP13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 FPGT-TNNI3KV9GXZ4 949 aa13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 ABCC12Q96J65 1359 aa13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 GRIPAP1Q4V328 841 aa13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 SP8Q8IXZ3 490 aa13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.53□□□□□ -0.24
TNFAIP3-201ENST00000237289 UBE4AQ14139 1066 aa13.52□□□□□ -0.24
TNFAIP3-201ENST00000237289 POLA2Q14181 598 aa13.52□□□□□ -0.24
TNFAIP3-201ENST00000237289 RAI14Q9P0K7 980 aa13.52□□□□□ -0.24
TNFAIP3-201ENST00000237289 ZNF804BA4D1E1 1349 aa13.52□□□□□ -0.24
TNFAIP3-201ENST00000237289 CASP7P55210 303 aa13.52□□□□□ -0.25
TNFAIP3-201ENST00000237289 SMC5Q8IY18 1101 aa13.52□□□□□ -0.25
TNFAIP3-201ENST00000237289 FHDC1Q9C0D6 1143 aaPredicted RBP13.52□□□□□ -0.25
TNFAIP3-201ENST00000237289 MINPP1Q9UNW1 487 aa13.52□□□□□ -0.25
TNFAIP3-201ENST00000237289 NUCB1Q02818 461 aa13.51□□□□□ -0.25
TNFAIP3-201ENST00000237289 NIM1KQ8IY84 436 aa13.51□□□□□ -0.25
TNFAIP3-201ENST00000237289 RBM5P52756 815 aaKnown RBP eCLIP13.51□□□□□ -0.25
TNFAIP3-201ENST00000237289 XAGE2Q96GT9 111 aa13.51□□□□□ -0.25
TNFAIP3-201ENST00000237289 DDRGK1Q96HY6 314 aa13.51□□□□□ -0.25
TNFAIP3-201ENST00000237289 NOP58Q9Y2X3 529 aaKnown RBP13.51□□□□□ -0.25
TNFAIP3-201ENST00000237289 IDH1O75874 414 aaKnown RBP13.51□□□□□ -0.25
TNFAIP3-201ENST00000237289 RUFY2Q8WXA3 655 aa13.51□□□□□ -0.25
TNFAIP3-201ENST00000237289 SNRKQ9NRH2 765 aa13.5□□□□□ -0.25
TNFAIP3-201ENST00000237289 ATP6V0A2Q9Y487 856 aa13.5□□□□□ -0.25
TNFAIP3-201ENST00000237289 ZSCAN25Q6NSZ9 544 aa13.5□□□□□ -0.25
TNFAIP3-201ENST00000237289 TAOK3Q9H2K8 898 aa13.5□□□□□ -0.25
TNFAIP3-201ENST00000237289 SIPA1L3O60292 1781 aaPredicted RBP13.5□□□□□ -0.25
TNFAIP3-201ENST00000237289 C3orf67Q6ZVT6 689 aa13.5□□□□□ -0.25
TNFAIP3-201ENST00000237289 C5P01031 1676 aa13.5□□□□□ -0.25
TNFAIP3-201ENST00000237289 MAP4K4O95819 1239 aaPredicted RBP13.5□□□□□ -0.25
TNFAIP3-201ENST00000237289 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
TNFAIP3-201ENST00000237289 SIRT2Q8IXJ6 389 aa13.5□□□□□ -0.25
TNFAIP3-201ENST00000237289 KAZALD1Q96I82 304 aa13.5□□□□□ -0.25
TNFAIP3-201ENST00000237289 DAXXQ9UER7 740 aaPredicted RBP13.5□□□□□ -0.25
TNFAIP3-201ENST00000237289 DBNDD2Q9BQY9 259 aa13.49□□□□□ -0.25
TNFAIP3-201ENST00000237289 CACNA1FO60840 1977 aa13.49□□□□□ -0.25
TNFAIP3-201ENST00000237289 DZIP1Q86YF9 867 aaKnown RBP13.49□□□□□ -0.25
TNFAIP3-201ENST00000237289 SPTY2D1Q68D10 685 aaPredicted RBP13.49□□□□□ -0.25
TNFAIP3-201ENST00000237289 ZGPATQ8N5A5 531 aaKnown RBP13.49□□□□□ -0.25
TNFAIP3-201ENST00000237289 LAMB4A4D0S4 1761 aa13.49□□□□□ -0.25
TNFAIP3-201ENST00000237289 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
TNFAIP3-201ENST00000237289 TTF1Q15361 905 aaPredicted RBP13.48□□□□□ -0.25
TNFAIP3-201ENST00000237289 DENND2AQ9ULE3 1009 aa13.48□□□□□ -0.25
TNFAIP3-201ENST00000237289 HOXA10P31260 410 aaPredicted RBP13.48□□□□□ -0.25
TNFAIP3-201ENST00000237289 C16orf71Q8IYS4 520 aaPredicted RBP13.48□□□□□ -0.25
TNFAIP3-201ENST00000237289 GPR108Q9NPR9 543 aa13.48□□□□□ -0.25
TNFAIP3-201ENST00000237289 SBF2Q86WG5 1849 aa13.48□□□□□ -0.25
TNFAIP3-201ENST00000237289 HIP1O00291 1037 aa13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 GRIN3BO60391 1043 aa13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 GYG1P46976 350 aa13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 DOK7Q18PE1 504 aa13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 SLF2Q8IX21 1173 aa13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 GOLIM4O00461 696 aa13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 APPP05067 770 aa13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 GPSM2P81274 684 aa13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 OGFOD1Q8N543 542 aa13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 RIPOR2Q9Y4F9 1068 aa13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 TSHZ3Q63HK5 1081 aa13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 EAF2Q96CJ1 260 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 PAPPAQ13219 1627 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms