RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 NPHP1O15259 732 aa12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 CNBD1Q8NA66 436 aa12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 NLRP3Q96P20 1036 aa12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 DBNDD2Q9BQY9 259 aa12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 STK32BQ9NY57 414 aa12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 DBNLQ9UJU6 430 aaKnown RBP12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 AK9Q5TCS8 1911 aa12.38□□□□□ -0.43
PRAMEF4-201ENST00000235349 TNRC6CQ9HCJ0 1690 aaKnown RBP12.38□□□□□ -0.43
PRAMEF4-201ENST00000235349 NLGN1Q8N2Q7 840 aa12.38□□□□□ -0.43
PRAMEF4-201ENST00000235349 NEUROD6Q96NK8 337 aa12.38□□□□□ -0.43
PRAMEF4-201ENST00000235349 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
PRAMEF4-201ENST00000235349 RTL9Q8NET4 1388 aa12.37□□□□□ -0.43
PRAMEF4-201ENST00000235349 SNAP23O00161 211 aa12.37□□□□□ -0.43
PRAMEF4-201ENST00000235349 METTL24Q5JXM2 366 aa12.37□□□□□ -0.43
PRAMEF4-201ENST00000235349 L1TD1Q5T7N2 865 aaKnown RBP12.37□□□□□ -0.43
PRAMEF4-201ENST00000235349 CELF1Q92879 486 aaKnown RBP12.37□□□□□ -0.43
PRAMEF4-201ENST00000235349 ECHDC1Q9NTX5 307 aa12.37□□□□□ -0.43
PRAMEF4-201ENST00000235349 A0A1B0GUL7 405 aa12.37□□□□□ -0.43
PRAMEF4-201ENST00000235349 ADORA1P30542 326 aa12.37□□□□□ -0.43
PRAMEF4-201ENST00000235349 TBC1D9Q6ZT07 1266 aa12.37□□□□□ -0.43
PRAMEF4-201ENST00000235349 VGLL2Q8N8G2 317 aa12.37□□□□□ -0.43
PRAMEF4-201ENST00000235349 GPR108Q9NPR9 543 aa12.37□□□□□ -0.43
PRAMEF4-201ENST00000235349 RIC1Q4ADV7 1423 aa12.36□□□□□ -0.43
PRAMEF4-201ENST00000235349 AOX1Q06278 1338 aa12.36□□□□□ -0.43
PRAMEF4-201ENST00000235349 WTIPA6NIX2 430 aaPredicted RBP12.36□□□□□ -0.43
PRAMEF4-201ENST00000235349 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
PRAMEF4-201ENST00000235349 TAF5LO75529 589 aa12.36□□□□□ -0.43
PRAMEF4-201ENST00000235349 MMP10P09238 476 aa12.36□□□□□ -0.43
PRAMEF4-201ENST00000235349 RILPL2Q969X0 211 aa12.36□□□□□ -0.43
PRAMEF4-201ENST00000235349 MPHOSPH8Q99549 860 aa12.36□□□□□ -0.43
PRAMEF4-201ENST00000235349 TTC41PQ6P2S7 1318 aa12.36□□□□□ -0.43
PRAMEF4-201ENST00000235349 IGHMBP2P38935 993 aaKnown RBP12.35□□□□□ -0.43
PRAMEF4-201ENST00000235349 SLC51AQ86UW1 340 aa12.35□□□□□ -0.43
PRAMEF4-201ENST00000235349 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
PRAMEF4-201ENST00000235349 ANKRD31Q8N7Z5 1873 aa12.35□□□□□ -0.43
PRAMEF4-201ENST00000235349 BOLA2Q9H3K6 86 aa12.35□□□□□ -0.43
PRAMEF4-201ENST00000235349 QSER1Q2KHR3 1735 aa12.35□□□□□ -0.43
PRAMEF4-201ENST00000235349 GLRX3O76003 335 aaKnown RBP12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 RPS8P62241 208 aaKnown RBP12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 XAGE2Q96GT9 111 aa12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 CDC5LQ99459 802 aaKnown RBP12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 NDUFB9Q9Y6M9 179 aa12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 ZNF609O15014 1411 aa12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 ERC2O15083 957 aa12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 CDC45O75419 566 aa12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 PDE8BO95263 885 aa12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 ST5P78524 1137 aa12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 CHRNDQ07001 517 aa12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 EDC3Q96F86 508 aaKnown RBP12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 GPATCH3Q96I76 525 aa12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 AKAP2Q9Y2D5 859 aa12.34□□□□□ -0.43
PRAMEF4-201ENST00000235349 LRP5O75197 1615 aa12.33□□□□□ -0.44
PRAMEF4-201ENST00000235349 NRXN2Q9P2S2 1712 aa12.33□□□□□ -0.44
PRAMEF4-201ENST00000235349 ATP5JP18859 108 aa12.33□□□□□ -0.44
PRAMEF4-201ENST00000235349 FGFR2P21802 821 aa12.33□□□□□ -0.44
PRAMEF4-201ENST00000235349 ATP2B3Q16720 1220 aa12.33□□□□□ -0.44
PRAMEF4-201ENST00000235349 DDX46Q7L014 1031 aaKnown RBP12.33□□□□□ -0.44
PRAMEF4-201ENST00000235349 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRAMEF4-201ENST00000235349 BSDC1Q9NW68 430 aaPredicted RBP12.33□□□□□ -0.44
PRAMEF4-201ENST00000235349 MINPP1Q9UNW1 487 aa12.33□□□□□ -0.44
PRAMEF4-201ENST00000235349 PARP3Q9Y6F1 533 aa12.33□□□□□ -0.44
PRAMEF4-201ENST00000235349 MROH5Q6ZUA9 1318 aa12.33□□□□□ -0.44
PRAMEF4-201ENST00000235349 A0A1B0GUL6 1792 aa12.32□□□□□ -0.44
PRAMEF4-201ENST00000235349 CHMLP26374 656 aa12.32□□□□□ -0.44
PRAMEF4-201ENST00000235349 MFAP1P55081 439 aaKnown RBP12.32□□□□□ -0.44
PRAMEF4-201ENST00000235349 CRY2Q49AN0 593 aa12.32□□□□□ -0.44
PRAMEF4-201ENST00000235349 AKAP11Q9UKA4 1901 aa12.31□□□□□ -0.44
PRAMEF4-201ENST00000235349 KLRG2A4D1S0 409 aaPredicted RBP12.31□□□□□ -0.44
PRAMEF4-201ENST00000235349 FRAT2O75474 233 aaPredicted RBP12.31□□□□□ -0.44
PRAMEF4-201ENST00000235349 GORABQ5T7V8 394 aa12.31□□□□□ -0.44
PRAMEF4-201ENST00000235349 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 SCARF1Q14162 830 aa12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 PUM3Q15397 648 aaKnown RBP12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 LPIN2Q92539 896 aa12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 RPGRQ92834 1020 aaKnown RBP12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 DNAJC2Q99543 621 aaKnown RBP12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 BRIP1Q9BX63 1249 aa12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 UPF2Q9HAU5 1272 aaKnown RBP12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 GOLGB1Q14789 3259 aaKnown RBP12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 RRP9O43818 475 aaKnown RBP12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 GRAPQ13588 217 aa12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 CNTROBQ8N137 903 aa12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 HAUS7Q99871 368 aa12.3□□□□□ -0.44
PRAMEF4-201ENST00000235349 IFIT1P09914 478 aaKnown RBP12.29□□□□□ -0.44
PRAMEF4-201ENST00000235349 PHKA1P46020 1223 aa12.29□□□□□ -0.44
PRAMEF4-201ENST00000235349 SLC4A3P48751 1232 aa12.29□□□□□ -0.44
PRAMEF4-201ENST00000235349 CCDC158Q5M9N0 1113 aa12.29□□□□□ -0.44
PRAMEF4-201ENST00000235349 TTC39AQ5SRH9 613 aa12.29□□□□□ -0.44
PRAMEF4-201ENST00000235349 EVI5LQ96CN4 794 aa12.29□□□□□ -0.44
PRAMEF4-201ENST00000235349 RBM17Q96I25 401 aaKnown RBP12.29□□□□□ -0.44
PRAMEF4-201ENST00000235349 IL25Q9H293 177 aa12.29□□□□□ -0.44
PRAMEF4-201ENST00000235349 CHGBP05060 677 aa12.28□□□□□ -0.44
PRAMEF4-201ENST00000235349 SLC5A1P13866 664 aa12.28□□□□□ -0.44
PRAMEF4-201ENST00000235349 HOXA10P31260 410 aaPredicted RBP12.28□□□□□ -0.44
PRAMEF4-201ENST00000235349 BCAMP50895 628 aa12.28□□□□□ -0.44
PRAMEF4-201ENST00000235349 PI16Q6UXB8 463 aa12.28□□□□□ -0.44
PRAMEF4-201ENST00000235349 ANTXR1Q9H6X2 564 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms