RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 TJP1Q07157 1748 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 CCDC66A2RUB6 948 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 GRM8O00222 908 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 SLC27A2O14975 620 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 ALDH1L1O75891 902 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 SLC39A6Q13433 755 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 ATP6V1DQ9Y5K8 247 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 ZKSCAN1P17029 563 aaPredicted RBP11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 STK3Q13188 491 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 C1orf141Q5JVX7 400 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 ZNF589Q86UQ0 364 aaPredicted RBP11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 PIBF1Q8WXW3 757 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 CHMP4CQ96CF2 233 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 TM6SF1Q9BZW5 370 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 AXIN2Q9Y2T1 843 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 G3BP1Q13283 466 aaKnown RBP eCLIP11.13□□□□□ -0.63
HLA-DOA-201ENST00000229829 GPATCH3Q96I76 525 aa11.13□□□□□ -0.63
HLA-DOA-201ENST00000229829 IGKV5-2P06315 115 aa11.13□□□□□ -0.63
HLA-DOA-201ENST00000229829 LIG1P18858 919 aa11.13□□□□□ -0.63
HLA-DOA-201ENST00000229829 PIP4K2AP48426 406 aaPredicted RBP11.13□□□□□ -0.63
HLA-DOA-201ENST00000229829 EPHA10Q5JZY3 1008 aa11.13□□□□□ -0.63
HLA-DOA-201ENST00000229829 TAF3Q5VWG9 929 aa11.13□□□□□ -0.63
HLA-DOA-201ENST00000229829 ZSCAN31Q96LW9 406 aaPredicted RBP11.13□□□□□ -0.63
HLA-DOA-201ENST00000229829 SH2B1Q9NRF2 756 aaPredicted RBP11.13□□□□□ -0.63
HLA-DOA-201ENST00000229829 TFIP11Q9UBB9 837 aaKnown RBP11.13□□□□□ -0.63
HLA-DOA-201ENST00000229829 MYL6BP14649 208 aa11.12□□□□□ -0.63
HLA-DOA-201ENST00000229829 ORAI2Q96SN7 254 aa11.12□□□□□ -0.63
HLA-DOA-201ENST00000229829 FSD1Q9BTV5 496 aa11.12□□□□□ -0.63
HLA-DOA-201ENST00000229829 LAMB2P55268 1798 aa11.12□□□□□ -0.63
HLA-DOA-201ENST00000229829 GCP02774 474 aa11.12□□□□□ -0.63
HLA-DOA-201ENST00000229829 PDIA6Q15084 440 aa11.12□□□□□ -0.63
HLA-DOA-201ENST00000229829 ERC1Q8IUD2 1116 aa11.12□□□□□ -0.63
HLA-DOA-201ENST00000229829 LINS1Q8NG48 757 aa11.12□□□□□ -0.63
HLA-DOA-201ENST00000229829 TIGD1Q96MW7 591 aa11.12□□□□□ -0.63
HLA-DOA-201ENST00000229829 C4AP0C0L4 1744 aa11.12□□□□□ -0.63
HLA-DOA-201ENST00000229829 C4BP0C0L5 1744 aa11.12□□□□□ -0.63
HLA-DOA-201ENST00000229829 C19orf44Q9H6X5 657 aa11.12□□□□□ -0.63
HLA-DOA-201ENST00000229829 IRX3P78415 501 aaPredicted RBP11.11□□□□□ -0.63
HLA-DOA-201ENST00000229829 ANKRD24Q8TF21 1146 aa11.11□□□□□ -0.63
HLA-DOA-201ENST00000229829 KCNF1Q9H3M0 494 aa11.11□□□□□ -0.63
HLA-DOA-201ENST00000229829 TOB2Q14106 344 aaPredicted RBP11.11□□□□□ -0.63
HLA-DOA-201ENST00000229829 LARP1Q6PKG0 1096 aaKnown RBP11.11□□□□□ -0.63
HLA-DOA-201ENST00000229829 CKAP2LQ8IYA6 745 aa11.11□□□□□ -0.63
HLA-DOA-201ENST00000229829 FNBP4Q8N3X1 1017 aaPredicted RBP11.11□□□□□ -0.63
HLA-DOA-201ENST00000229829 PYCARDQ9ULZ3 195 aa11.11□□□□□ -0.63
HLA-DOA-201ENST00000229829 HEG1Q9ULI3 1381 aa11.11□□□□□ -0.63
HLA-DOA-201ENST00000229829 RIC3Q7Z5B4 369 aa11.11□□□□□ -0.63
HLA-DOA-201ENST00000229829 ARHGEF25Q86VW2 580 aa11.11□□□□□ -0.63
HLA-DOA-201ENST00000229829 KCNH5Q8NCM2 988 aa11.11□□□□□ -0.63
HLA-DOA-201ENST00000229829 AMOTQ4VCS5 1084 aa11.1□□□□□ -0.63
HLA-DOA-201ENST00000229829 BLOC1S2Q6QNY1 142 aa11.1□□□□□ -0.63
HLA-DOA-201ENST00000229829 DOT1LQ8TEK3 1739 aa11.1□□□□□ -0.63
HLA-DOA-201ENST00000229829 GTF2F1P35269 517 aaKnown RBP eCLIP11.1□□□□□ -0.63
HLA-DOA-201ENST00000229829 DHX37Q8IY37 1157 aaKnown RBP11.1□□□□□ -0.63
HLA-DOA-201ENST00000229829 SEC62Q99442 399 aaKnown RBP11.1□□□□□ -0.63
HLA-DOA-201ENST00000229829 DDX21Q9NR30 783 aaKnown RBP eCLIP11.1□□□□□ -0.63
HLA-DOA-201ENST00000229829 BTAF1O14981 1849 aa11.1□□□□□ -0.63
HLA-DOA-201ENST00000229829 JAK2O60674 1132 aa11.1□□□□□ -0.63
HLA-DOA-201ENST00000229829 KRT85P78386 507 aa11.1□□□□□ -0.63
HLA-DOA-201ENST00000229829 LUZP1Q86V48 1076 aa11.1□□□□□ -0.63
HLA-DOA-201ENST00000229829 DDX11Q96FC9 970 aa11.1□□□□□ -0.63
HLA-DOA-201ENST00000229829 COL15A1P39059 1388 aa11.09□□□□□ -0.63
HLA-DOA-201ENST00000229829 RPS6KB1P23443 525 aa11.09□□□□□ -0.63
HLA-DOA-201ENST00000229829 CCDC129Q6ZRS4 1044 aa11.09□□□□□ -0.63
HLA-DOA-201ENST00000229829 CCDC9Q9Y3X0 531 aaKnown RBP11.09□□□□□ -0.63
HLA-DOA-201ENST00000229829 OVOS2A0A0G2JMS6 1433 aa11.09□□□□□ -0.63
HLA-DOA-201ENST00000229829 MYD88Q99836 296 aa11.09□□□□□ -0.63
HLA-DOA-201ENST00000229829 ST7Q9NRC1 585 aa11.09□□□□□ -0.63
HLA-DOA-201ENST00000229829 DACT1Q9NYF0 836 aa11.09□□□□□ -0.63
HLA-DOA-201ENST00000229829 SCN7AQ01118 1682 aa11.09□□□□□ -0.63
HLA-DOA-201ENST00000229829 UTYO14607 1347 aa11.09□□□□□ -0.63
HLA-DOA-201ENST00000229829 TAF5LO75529 589 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 CCDC192P0DO97 292 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 COPS6Q7L5N1 327 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 XAGE3Q8WTP9 111 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 LRRC2Q9BYS8 371 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 OGFRQ9NZT2 677 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 MRVI1Q9Y6F6 885 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 NEURL1BA8MQ27 555 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 PSMA5P28066 241 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 SLFNL1Q499Z3 407 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 CCDC112Q8NEF3 446 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 DBNLQ9UJU6 430 aaKnown RBP11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 UBR3Q6ZT12 1888 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 MED23Q9ULK4 1368 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 DDX58O95786 925 aaKnown RBP11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 TPD52L1Q16890 204 aaPredicted RBP11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 NFATC2IPQ8NCF5 419 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 NUP62CLQ9H1M0 184 aa11.08□□□□□ -0.64
HLA-DOA-201ENST00000229829 HIP1O00291 1037 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 TYRO3Q06418 890 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 GCKRQ14397 625 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 MAP3K11Q16584 847 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 SNRKQ9NRH2 765 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 PPFIA3O75145 1194 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 ZC3H6P61129 1189 aaKnown RBP11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 ZNF790Q6PG37 636 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 KIAA1524Q8TCG1 905 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 SPATA32Q96LK8 384 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 DNAJC2Q99543 621 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms