RNA–Protein interactions for RNA: ENST00000228825.11

ARPC3-201, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC3, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-201ENST00000228825 LAMB2P55268 1798 aa12.81□□□□□ -0.36
ARPC3-201ENST00000228825 F6X3S4 739 aa12.81□□□□□ -0.36
ARPC3-201ENST00000228825 ALDH1L1O75891 902 aa12.81□□□□□ -0.36
ARPC3-201ENST00000228825 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
ARPC3-201ENST00000228825 GCKRQ14397 625 aa12.81□□□□□ -0.36
ARPC3-201ENST00000228825 BEND3Q5T5X7 828 aa12.81□□□□□ -0.36
ARPC3-201ENST00000228825 RPGRQ92834 1020 aaKnown RBP12.81□□□□□ -0.36
ARPC3-201ENST00000228825 KHSRPQ92945 711 aaKnown RBP eCLIP12.81□□□□□ -0.364e-8■■■□□ 19.2
ARPC3-201ENST00000228825 ZNF622Q969S3 477 aaKnown RBP eCLIP12.81□□□□□ -0.36
ARPC3-201ENST00000228825 FAM89AQ96GI7 184 aa12.81□□□□□ -0.36
ARPC3-201ENST00000228825 API5Q9BZZ5 524 aaKnown RBP12.81□□□□□ -0.36
ARPC3-201ENST00000228825 SRCIN1Q9C0H9 1055 aa12.81□□□□□ -0.36
ARPC3-201ENST00000228825 BCS1LQ9Y276 419 aa12.81□□□□□ -0.36
ARPC3-201ENST00000228825 CDHR2Q9BYE9 1310 aa12.81□□□□□ -0.36
ARPC3-201ENST00000228825 DDX60Q8IY21 1712 aaKnown RBP12.8□□□□□ -0.36
ARPC3-201ENST00000228825 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
ARPC3-201ENST00000228825 CWF19L2Q2TBE0 894 aaKnown RBP12.8□□□□□ -0.36
ARPC3-201ENST00000228825 SLC4A10Q6U841 1118 aa12.8□□□□□ -0.36
ARPC3-201ENST00000228825 RBM17Q96I25 401 aaKnown RBP12.8□□□□□ -0.36
ARPC3-201ENST00000228825 NOB1Q9ULX3 412 aaKnown RBP12.8□□□□□ -0.36
ARPC3-201ENST00000228825 CACNA1SQ13698 1873 aa12.8□□□□□ -0.36
ARPC3-201ENST00000228825 TNRC6CQ9HCJ0 1690 aaKnown RBP12.8□□□□□ -0.36
ARPC3-201ENST00000228825 SLX4Q8IY92 1834 aa12.79□□□□□ -0.36
ARPC3-201ENST00000228825 H7C1W4 665 aa12.79□□□□□ -0.36
ARPC3-201ENST00000228825 IRS4O14654 1257 aaPredicted RBP12.79□□□□□ -0.36
ARPC3-201ENST00000228825 HCLS1P14317 486 aaPredicted RBP12.79□□□□□ -0.36
ARPC3-201ENST00000228825 YBX3P16989 372 aaKnown RBP eCLIP12.79□□□□□ -0.365e-8■□□□□ 10.2
ARPC3-201ENST00000228825 SYNE4Q8N205 404 aa12.79□□□□□ -0.36
ARPC3-201ENST00000228825 CRAMP1Q96RY5 1269 aa12.79□□□□□ -0.36
ARPC3-201ENST00000228825 PDE8AO60658 829 aa12.78□□□□□ -0.36
ARPC3-201ENST00000228825 SF3B3Q15393 1217 aaKnown RBP12.78□□□□□ -0.36
ARPC3-201ENST00000228825 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
ARPC3-201ENST00000228825 SOGA3Q5TF21 947 aa12.78□□□□□ -0.36
ARPC3-201ENST00000228825 BCAR3O75815 825 aa12.77□□□□□ -0.37
ARPC3-201ENST00000228825 CCT4P50991 539 aaKnown RBP12.77□□□□□ -0.37
ARPC3-201ENST00000228825 PRPF40BQ6NWY9 871 aaKnown RBP12.77□□□□□ -0.37
ARPC3-201ENST00000228825 DDX46Q7L014 1031 aaKnown RBP12.77□□□□□ -0.37
ARPC3-201ENST00000228825 UBE3BQ7Z3V4 1068 aa12.77□□□□□ -0.37
ARPC3-201ENST00000228825 YTHDC1Q96MU7 727 aaKnown RBP12.77□□□□□ -0.37
ARPC3-201ENST00000228825 C9orf78Q9NZ63 289 aaPredicted RBP12.77□□□□□ -0.37
ARPC3-201ENST00000228825 GRM8O00222 908 aa12.76□□□□□ -0.37
ARPC3-201ENST00000228825 BBOX1O75936 387 aa12.76□□□□□ -0.37
ARPC3-201ENST00000228825 CCDC152Q4G0S7 254 aa12.76□□□□□ -0.37
ARPC3-201ENST00000228825 GRIPAP1Q4V328 841 aa12.76□□□□□ -0.37
ARPC3-201ENST00000228825 ZKSCAN2Q63HK3 967 aa12.76□□□□□ -0.37
ARPC3-201ENST00000228825 CC2D2BQ6DHV5 1058 aa12.76□□□□□ -0.37
ARPC3-201ENST00000228825 ATF7IPQ6VMQ6 1270 aa12.76□□□□□ -0.37
ARPC3-201ENST00000228825 TMC4Q7Z404 712 aa12.76□□□□□ -0.37
ARPC3-201ENST00000228825 PLA2G12BQ9BX93 195 aa12.76□□□□□ -0.37
ARPC3-201ENST00000228825 WWC3Q9ULE0 1092 aa12.76□□□□□ -0.37
ARPC3-201ENST00000228825 FBXO22Q8NEZ5 403 aa12.75□□□□□ -0.37
ARPC3-201ENST00000228825 FRAT1Q92837 279 aaPredicted RBP12.75□□□□□ -0.37
ARPC3-201ENST00000228825 TMX4Q9H1E5 349 aaPredicted RBP12.75□□□□□ -0.37
ARPC3-201ENST00000228825 HDAC5Q9UQL6 1122 aa12.75□□□□□ -0.37
ARPC3-201ENST00000228825 SBF1O95248 1867 aa12.74□□□□□ -0.37
ARPC3-201ENST00000228825 TAF1P21675 1872 aa12.74□□□□□ -0.37
ARPC3-201ENST00000228825 FER1L6Q2WGJ9 1857 aa12.74□□□□□ -0.37
ARPC3-201ENST00000228825 UTYO14607 1347 aa12.74□□□□□ -0.37
ARPC3-201ENST00000228825 MS4A1P11836 297 aa12.74□□□□□ -0.37
ARPC3-201ENST00000228825 CASP7P55210 303 aa12.74□□□□□ -0.37
ARPC3-201ENST00000228825 CTSWP56202 376 aa12.74□□□□□ -0.37
ARPC3-201ENST00000228825 ARHGAP27Q6ZUM4 889 aa12.74□□□□□ -0.37
ARPC3-201ENST00000228825 C7orf43Q8WVR3 580 aa12.74□□□□□ -0.37
ARPC3-201ENST00000228825 JARID2Q92833 1246 aaPredicted RBP12.74□□□□□ -0.37
ARPC3-201ENST00000228825 RCAN3Q9UKA8 241 aa12.74□□□□□ -0.37
ARPC3-201ENST00000228825 CCDC88AQ3V6T2 1871 aa12.74□□□□□ -0.37
ARPC3-201ENST00000228825 RTL9Q8NET4 1388 aa12.73□□□□□ -0.37
ARPC3-201ENST00000228825 ABCC4O15439 1325 aa12.73□□□□□ -0.37
ARPC3-201ENST00000228825 C21orf2O43822 256 aa12.73□□□□□ -0.37
ARPC3-201ENST00000228825 TRIM27P14373 513 aa12.73□□□□□ -0.37
ARPC3-201ENST00000228825 PBX2P40425 430 aa12.73□□□□□ -0.37
ARPC3-201ENST00000228825 GRAPQ13588 217 aa12.73□□□□□ -0.37
ARPC3-201ENST00000228825 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
ARPC3-201ENST00000228825 RTKN2Q8IZC4 609 aa12.73□□□□□ -0.37
ARPC3-201ENST00000228825 TTLL11Q8NHH1 800 aa12.73□□□□□ -0.37
ARPC3-201ENST00000228825 GRAPLQ8TC17 118 aaPredicted RBP12.73□□□□□ -0.37
ARPC3-201ENST00000228825 KIF3CO14782 793 aa12.72□□□□□ -0.37
ARPC3-201ENST00000228825 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
ARPC3-201ENST00000228825 CSF1RP07333 972 aa12.72□□□□□ -0.37
ARPC3-201ENST00000228825 RPS8P62241 208 aaKnown RBP12.72□□□□□ -0.37
ARPC3-201ENST00000228825 CCDC93Q567U6 631 aa12.72□□□□□ -0.37
ARPC3-201ENST00000228825 CDC5LQ99459 802 aaKnown RBP12.72□□□□□ -0.37
ARPC3-201ENST00000228825 USP44Q9H0E7 712 aa12.72□□□□□ -0.37
ARPC3-201ENST00000228825 ATP6V0A2Q9Y487 856 aa12.72□□□□□ -0.37
ARPC3-201ENST00000228825 LTBP3Q9NS15 1303 aa12.71□□□□□ -0.37
ARPC3-201ENST00000228825 SP8Q8IXZ3 490 aa12.71□□□□□ -0.37
ARPC3-201ENST00000228825 FTSJ3Q8IY81 847 aaKnown RBP12.71□□□□□ -0.37
ARPC3-201ENST00000228825 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.71□□□□□ -0.37
ARPC3-201ENST00000228825 DICER1Q9UPY3 1922 aaKnown RBP12.7□□□□□ -0.38
ARPC3-201ENST00000228825 NBPF7P0C2Y1 421 aaPredicted RBP12.7□□□□□ -0.38
ARPC3-201ENST00000228825 FOXO4P98177 505 aa12.7□□□□□ -0.38
ARPC3-201ENST00000228825 DZIP1LQ8IYY4 767 aaKnown RBP12.7□□□□□ -0.38
ARPC3-201ENST00000228825 GNAI3P08754 354 aa12.69□□□□□ -0.38
ARPC3-201ENST00000228825 UBTFL1P0CB47 393 aaPredicted RBP12.69□□□□□ -0.38
ARPC3-201ENST00000228825 ANKRD18AQ8IVF6 992 aa12.69□□□□□ -0.38
ARPC3-201ENST00000228825 CELF1Q92879 486 aaKnown RBP12.69□□□□□ -0.38
ARPC3-201ENST00000228825 CLUAP1Q96AJ1 413 aa12.69□□□□□ -0.38
ARPC3-201ENST00000228825 PSMD1Q99460 953 aa12.69□□□□□ -0.38
ARPC3-201ENST00000228825 TAOK3Q9H2K8 898 aa12.69□□□□□ -0.38
ARPC3-201ENST00000228825 GREM2Q9H772 168 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms