RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 ZNF34Q8IZ26 560 aa22.92■■□□□ 1.26
YBX3-201ENST00000228251 HELLSQ9NRZ9 838 aa22.92■■□□□ 1.26
YBX3-201ENST00000228251 RIPOR2Q9Y4F9 1068 aa22.92■■□□□ 1.26
YBX3-201ENST00000228251 UBN2Q6ZU65 1347 aa22.92■■□□□ 1.26
YBX3-201ENST00000228251 DDX60Q8IY21 1712 aaKnown RBP22.91■■□□□ 1.26
YBX3-201ENST00000228251 GOLIM4O00461 696 aa22.91■■□□□ 1.26
YBX3-201ENST00000228251 PRPF40AO75400 957 aaKnown RBP22.91■■□□□ 1.26
YBX3-201ENST00000228251 GPTP24298 496 aa22.91■■□□□ 1.26
YBX3-201ENST00000228251 INTS5Q6P9B9 1019 aaKnown RBP22.91■■□□□ 1.26
YBX3-201ENST00000228251 SYTL4Q96C24 671 aaPredicted RBP22.91■■□□□ 1.26
YBX3-201ENST00000228251 GRPEL1Q9HAV7 217 aa22.91■■□□□ 1.26
YBX3-201ENST00000228251 TPCN1Q9ULQ1 816 aa22.91■■□□□ 1.26
YBX3-201ENST00000228251 U3KPZ7 1027 aaPredicted RBP22.91■■□□□ 1.26
YBX3-201ENST00000228251 ABCC12Q96J65 1359 aa22.91■■□□□ 1.26
YBX3-201ENST00000228251 CTSWP56202 376 aa22.91■■□□□ 1.26
YBX3-201ENST00000228251 ZNF445P59923 1031 aa22.91■■□□□ 1.26
YBX3-201ENST00000228251 IFIT5Q13325 482 aaKnown RBP22.91■■□□□ 1.26
YBX3-201ENST00000228251 AKAP2Q9Y2D5 859 aa22.91■■□□□ 1.26
YBX3-201ENST00000228251 BCORQ6W2J9 1755 aa22.9■■□□□ 1.26
YBX3-201ENST00000228251 IFIT1P09914 478 aaKnown RBP22.9■■□□□ 1.26
YBX3-201ENST00000228251 FOXD4L5Q5VV16 416 aaPredicted RBP22.9■■□□□ 1.26
YBX3-201ENST00000228251 BLOC1S2Q6QNY1 142 aa22.9■■□□□ 1.26
YBX3-201ENST00000228251 DZIP3Q86Y13 1208 aaKnown RBP22.9■■□□□ 1.26
YBX3-201ENST00000228251 FOXD4L4Q8WXT5 416 aaPredicted RBP22.9■■□□□ 1.26
YBX3-201ENST00000228251 SYT1P21579 422 aa22.89■■□□□ 1.26
YBX3-201ENST00000228251 ADORA1P30542 326 aa22.89■■□□□ 1.26
YBX3-201ENST00000228251 TOB2Q14106 344 aaPredicted RBP22.89■■□□□ 1.26
YBX3-201ENST00000228251 XAGE2Q96GT9 111 aa22.89■■□□□ 1.26
YBX3-201ENST00000228251 GREM2Q9H772 168 aa22.89■■□□□ 1.26
YBX3-201ENST00000228251 KRT32Q14532 448 aa22.89■■□□□ 1.25
YBX3-201ENST00000228251 AEBP2Q6ZN18 517 aaPredicted RBP22.89■■□□□ 1.25
YBX3-201ENST00000228251 CCDC83Q8IWF9 413 aa22.89■■□□□ 1.25
YBX3-201ENST00000228251 VGLL2Q8N8G2 317 aa22.89■■□□□ 1.25
YBX3-201ENST00000228251 PANK2Q9BZ23 570 aa22.89■■□□□ 1.25
YBX3-201ENST00000228251 IRS4O14654 1257 aaPredicted RBP22.88■■□□□ 1.25
YBX3-201ENST00000228251 CYP21A2P08686 494 aa22.88■■□□□ 1.25
YBX3-201ENST00000228251 ZSCAN22P10073 491 aaPredicted RBP22.88■■□□□ 1.25
YBX3-201ENST00000228251 DSCC1Q9BVC3 393 aa22.88■■□□□ 1.25
YBX3-201ENST00000228251 SMC3Q9UQE7 1217 aa22.88■■□□□ 1.25
YBX3-201ENST00000228251 CCDC9Q9Y3X0 531 aaKnown RBP22.88■■□□□ 1.25
YBX3-201ENST00000228251 STX6O43752 255 aa22.87■■□□□ 1.25
YBX3-201ENST00000228251 ITGA6P23229 1130 aa22.87■■□□□ 1.25
YBX3-201ENST00000228251 ANKRD1Q15327 319 aa22.87■■□□□ 1.25
YBX3-201ENST00000228251 SLFNL1Q499Z3 407 aa22.87■■□□□ 1.25
YBX3-201ENST00000228251 TMEM87AQ8NBN3 555 aa22.87■■□□□ 1.25
YBX3-201ENST00000228251 CCDC87Q9NVE4 849 aa22.87■■□□□ 1.25
YBX3-201ENST00000228251 TBC1D2BQ9UPU7 963 aa22.87■■□□□ 1.25
YBX3-201ENST00000228251 RNF113AO15541 343 aaKnown RBP22.86■■□□□ 1.25
YBX3-201ENST00000228251 CCDC85AQ96PX6 553 aaPredicted RBP22.86■■□□□ 1.25
YBX3-201ENST00000228251 MAST3O60307 1309 aa22.86■■□□□ 1.25
YBX3-201ENST00000228251 PDE8AO60658 829 aa22.86■■□□□ 1.25
YBX3-201ENST00000228251 NSFL1CQ9UNZ2 370 aaKnown RBP22.86■■□□□ 1.25
YBX3-201ENST00000228251 MYO5AQ9Y4I1 1855 aaKnown RBP22.85■■□□□ 1.25
YBX3-201ENST00000228251 GJB2P29033 226 aa22.85■■□□□ 1.25
YBX3-201ENST00000228251 ITPK1Q13572 414 aa22.85■■□□□ 1.25
YBX3-201ENST00000228251 ZSCAN23Q3MJ62 389 aa22.85■■□□□ 1.25
YBX3-201ENST00000228251 CAVIN1Q6NZI2 390 aaKnown RBP22.85■■□□□ 1.25
YBX3-201ENST00000228251 AK7Q96M32 723 aa22.85■■□□□ 1.25
YBX3-201ENST00000228251 ARXQ96QS3 562 aa22.85■■□□□ 1.25
YBX3-201ENST00000228251 TRMT112Q9UI30 125 aaKnown RBP22.85■■□□□ 1.25
YBX3-201ENST00000228251 LOC102724428A0A0B4J2F2 783 aa22.84■■□□□ 1.25
YBX3-201ENST00000228251 CRKLP46109 303 aaKnown RBP22.84■■□□□ 1.25
YBX3-201ENST00000228251 SIK1P57059 783 aa22.84■■□□□ 1.25
YBX3-201ENST00000228251 SCARF1Q14162 830 aa22.84■■□□□ 1.25
YBX3-201ENST00000228251 ZNF512BQ96KM6 892 aaPredicted RBP22.84■■□□□ 1.25
YBX3-201ENST00000228251 MTMR6Q9Y217 621 aa22.84■■□□□ 1.25
YBX3-201ENST00000228251 ANKRD18BA2A2Z9 1011 aa22.84■■□□□ 1.25
YBX3-201ENST00000228251 MBD3O95983 291 aa22.84■■□□□ 1.25
YBX3-201ENST00000228251 TAF7LQ5H9L4 462 aa22.84■■□□□ 1.25
YBX3-201ENST00000228251 CCDC158Q5M9N0 1113 aa22.84■■□□□ 1.25
YBX3-201ENST00000228251 STOX1Q6ZVD7 989 aa22.84■■□□□ 1.25
YBX3-201ENST00000228251 NECAB1Q8N987 351 aa22.84■■□□□ 1.25
YBX3-201ENST00000228251 NEK1Q96PY6 1258 aa22.84■■□□□ 1.25
YBX3-201ENST00000228251 F13A1P00488 732 aa22.83■■□□□ 1.24
YBX3-201ENST00000228251 ACSBG1Q96GR2 724 aa22.83■■□□□ 1.24
YBX3-201ENST00000228251 TCEANC2Q96MN5 208 aa22.83■■□□□ 1.24
YBX3-201ENST00000228251 TMEM63CQ9P1W3 806 aa22.83■■□□□ 1.24
YBX3-201ENST00000228251 CASZ1Q86V15 1759 aa22.82■■□□□ 1.24
YBX3-201ENST00000228251 CAMTA2O94983 1202 aa22.82■■□□□ 1.24
YBX3-201ENST00000228251 ATP2B3Q16720 1220 aa22.82■■□□□ 1.24
YBX3-201ENST00000228251 TTC39AQ5SRH9 613 aa22.82■■□□□ 1.24
YBX3-201ENST00000228251 LDHAL6AQ6ZMR3 332 aa22.82■■□□□ 1.24
YBX3-201ENST00000228251 M0R2C6 588 aa22.81■■□□□ 1.24
YBX3-201ENST00000228251 HSPD1P10809 573 aaKnown RBP22.81■■□□□ 1.24
YBX3-201ENST00000228251 ATP6V1AP38606 617 aa22.81■■□□□ 1.24
YBX3-201ENST00000228251 OSBP2Q969R2 916 aa22.81■■□□□ 1.24
YBX3-201ENST00000228251 DOCK2Q92608 1830 aa22.81■■□□□ 1.24
YBX3-201ENST00000228251 FOXP2O15409 715 aa22.81■■□□□ 1.24
YBX3-201ENST00000228251 METTL24Q5JXM2 366 aa22.81■■□□□ 1.24
YBX3-201ENST00000228251 RBM27Q9P2N5 1060 aaKnown RBP22.81■■□□□ 1.24
YBX3-201ENST00000228251 BCL9LQ86UU0 1499 aa22.8■■□□□ 1.24
YBX3-201ENST00000228251 NUTM2BA6NNL0 878 aaPredicted RBP22.8■■□□□ 1.24
YBX3-201ENST00000228251 NUTM2EB1AL46 878 aaPredicted RBP22.8■■□□□ 1.24
YBX3-201ENST00000228251 ZFYP08048 801 aaPredicted RBP22.8■■□□□ 1.24
YBX3-201ENST00000228251 SUSD4Q5VX71 490 aa22.8■■□□□ 1.24
YBX3-201ENST00000228251 NUTM2AQ8IVF1 878 aaPredicted RBP22.8■■□□□ 1.24
YBX3-201ENST00000228251 AGXT2Q9BYV1 514 aa22.79■■□□□ 1.24
YBX3-201ENST00000228251 RTL9Q8NET4 1388 aa22.79■■□□□ 1.24
YBX3-201ENST00000228251 A0A1B0GUL6 1792 aa22.79■■□□□ 1.24
YBX3-201ENST00000228251 PDE8BO95263 885 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms