RNA–Protein interactions for RNA: ENST00000226317.9

CXCL6-201, Transcript of C-X-C motif chemokine ligand 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL6, Length 1,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL6-201ENST00000226317 C6orf229H3BNL8 230 aa20.13■□□□□ 0.81
CXCL6-201ENST00000226317 PUS3Q9BZE2 481 aaKnown RBP20.13■□□□□ 0.81
CXCL6-201ENST00000226317 BRCA1P38398 1863 aaKnown RBP20.12■□□□□ 0.81
CXCL6-201ENST00000226317 CHRNDQ07001 517 aa20.12■□□□□ 0.81
CXCL6-201ENST00000226317 CEP85Q6P2H3 762 aa20.12■□□□□ 0.81
CXCL6-201ENST00000226317 RPAP2Q8IXW5 612 aaPredicted RBP20.12■□□□□ 0.81
CXCL6-201ENST00000226317 SIL1Q9H173 461 aa20.12■□□□□ 0.81
CXCL6-201ENST00000226317 ZNF277Q9NRM2 450 aaPredicted RBP20.12■□□□□ 0.81
CXCL6-201ENST00000226317 PODXL2Q9NZ53 605 aa20.12■□□□□ 0.81
CXCL6-201ENST00000226317 GGA1Q9UJY5 639 aa20.12■□□□□ 0.81
CXCL6-201ENST00000226317 XDHP47989 1333 aa20.11■□□□□ 0.81
CXCL6-201ENST00000226317 LMNB1P20700 586 aa20.11■□□□□ 0.81
CXCL6-201ENST00000226317 LRRC24Q50LG9 513 aa20.11■□□□□ 0.81
CXCL6-201ENST00000226317 PA2G4Q9UQ80 394 aaKnown RBP20.11■□□□□ 0.81
CXCL6-201ENST00000226317 LTBP3Q9NS15 1303 aa20.11■□□□□ 0.81
CXCL6-201ENST00000226317 EYA2O00167 538 aa20.1■□□□□ 0.81
CXCL6-201ENST00000226317 HELBQ8NG08 1087 aaPredicted RBP20.1■□□□□ 0.81
CXCL6-201ENST00000226317 RTFDC1Q9BY42 306 aaPredicted RBP20.1■□□□□ 0.81
CXCL6-201ENST00000226317 COPRSQ9NQ92 184 aa20.1■□□□□ 0.81
CXCL6-201ENST00000226317 RIPOR2Q9Y4F9 1068 aa20.1■□□□□ 0.81
CXCL6-201ENST00000226317 UFL1O94874 794 aa20.1■□□□□ 0.81
CXCL6-201ENST00000226317 ATP2B4P23634 1241 aa20.1■□□□□ 0.81
CXCL6-201ENST00000226317 KCNJ4P48050 445 aa20.1■□□□□ 0.81
CXCL6-201ENST00000226317 METTL24Q5JXM2 366 aa20.1■□□□□ 0.81
CXCL6-201ENST00000226317 TBC1D16Q8TBP0 767 aa20.1■□□□□ 0.81
CXCL6-201ENST00000226317 RNF181Q9P0P0 153 aa20.1■□□□□ 0.81
CXCL6-201ENST00000226317 POLLQ9UGP5 575 aa20.1■□□□□ 0.81
CXCL6-201ENST00000226317 FBXO3Q9UK99 471 aa20.1■□□□□ 0.81
CXCL6-201ENST00000226317 MROH5Q6ZUA9 1318 aa20.09■□□□□ 0.81
CXCL6-201ENST00000226317 TAF5LO75529 589 aa20.09■□□□□ 0.81
CXCL6-201ENST00000226317 WASHC4Q2M389 1173 aa20.09■□□□□ 0.81
CXCL6-201ENST00000226317 C9orf131Q5VYM1 1079 aa20.09■□□□□ 0.81
CXCL6-201ENST00000226317 SSH3Q8TE77 659 aa20.09■□□□□ 0.81
CXCL6-201ENST00000226317 EYA3Q99504 573 aa20.09■□□□□ 0.81
CXCL6-201ENST00000226317 COL4A1P02462 1669 aa20.09■□□□□ 0.81
CXCL6-201ENST00000226317 HMMRO75330 724 aa20.08■□□□□ 0.81
CXCL6-201ENST00000226317 IARSP41252 1262 aaKnown RBP20.08■□□□□ 0.81
CXCL6-201ENST00000226317 IRX6P78412 446 aaPredicted RBP20.08■□□□□ 0.81
CXCL6-201ENST00000226317 G3BP1Q13283 466 aaKnown RBP eCLIP20.08■□□□□ 0.81
CXCL6-201ENST00000226317 POLA2Q14181 598 aa20.08■□□□□ 0.81
CXCL6-201ENST00000226317 VPS33BQ9H267 617 aa20.08■□□□□ 0.81
CXCL6-201ENST00000226317 LEMD3Q9Y2U8 911 aa20.08■□□□□ 0.81
CXCL6-201ENST00000226317 MYH3P11055 1940 aa20.08■□□□□ 0.81
CXCL6-201ENST00000226317 PPIP5K2O43314 1243 aa20.07■□□□□ 0.8
CXCL6-201ENST00000226317 CIAO1O76071 339 aa20.07■□□□□ 0.8
CXCL6-201ENST00000226317 LARGE2Q8N3Y3 721 aa20.07■□□□□ 0.8
CXCL6-201ENST00000226317 ZC3H12CQ9C0D7 883 aaKnown RBP20.07■□□□□ 0.8
CXCL6-201ENST00000226317 TAF1P21675 1872 aa20.07■□□□□ 0.8
CXCL6-201ENST00000226317 RIMBP2O15034 1052 aa20.07■□□□□ 0.8
CXCL6-201ENST00000226317 SURF6O75683 361 aaKnown RBP20.07■□□□□ 0.8
CXCL6-201ENST00000226317 IL15P40933 162 aaPredicted RBP20.07■□□□□ 0.8
CXCL6-201ENST00000226317 JDP2Q8WYK2 163 aa20.07■□□□□ 0.8
CXCL6-201ENST00000226317 ZNF804BA4D1E1 1349 aa20.06■□□□□ 0.8
CXCL6-201ENST00000226317 ARFGEF1Q9Y6D6 1849 aa20.06■□□□□ 0.8
CXCL6-201ENST00000226317 PRELPP51888 382 aa20.06■□□□□ 0.8
CXCL6-201ENST00000226317 AOC3Q16853 763 aa20.06■□□□□ 0.8
CXCL6-201ENST00000226317 EXOC6Q8TAG9 804 aa20.06■□□□□ 0.8
CXCL6-201ENST00000226317 CEP126Q9P2H0 1117 aa20.06■□□□□ 0.8
CXCL6-201ENST00000226317 SNED1Q8TER0 1413 aa20.06■□□□□ 0.8
CXCL6-201ENST00000226317 G3V3G9 751 aa20.05■□□□□ 0.8
CXCL6-201ENST00000226317 OS9Q13438 667 aaPredicted RBP20.05■□□□□ 0.8
CXCL6-201ENST00000226317 AAMPQ13685 434 aa20.05■□□□□ 0.8
CXCL6-201ENST00000226317 DCAF8Q5TAQ9 597 aa20.05■□□□□ 0.8
CXCL6-201ENST00000226317 ATG9AQ7Z3C6 839 aa20.05■□□□□ 0.8
CXCL6-201ENST00000226317 GPR101Q96P66 508 aaPredicted RBP20.05■□□□□ 0.8
CXCL6-201ENST00000226317 CACNA1SQ13698 1873 aa20.05■□□□□ 0.8
CXCL6-201ENST00000226317 WTIPA6NIX2 430 aaPredicted RBP20.05■□□□□ 0.8
CXCL6-201ENST00000226317 PDE8BO95263 885 aa20.05■□□□□ 0.8
CXCL6-201ENST00000226317 KIAA2012Q0VF49 1180 aa20.04■□□□□ 0.8
CXCL6-201ENST00000226317 SIRT2Q8IXJ6 389 aa20.04■□□□□ 0.8
CXCL6-201ENST00000226317 SNAP23O00161 211 aa20.03■□□□□ 0.8
CXCL6-201ENST00000226317 UBE4AQ14139 1066 aa20.03■□□□□ 0.8
CXCL6-201ENST00000226317 NIM1KQ8IY84 436 aa20.03■□□□□ 0.8
CXCL6-201ENST00000226317 NOP58Q9Y2X3 529 aaKnown RBP20.02■□□□□ 0.8
CXCL6-201ENST00000226317 PCDHB15Q9Y5E8 787 aa20.02■□□□□ 0.8
CXCL6-201ENST00000226317 PUM3Q15397 648 aaKnown RBP20.01■□□□□ 0.79
CXCL6-201ENST00000226317 DOK7Q18PE1 504 aa20.01■□□□□ 0.79
CXCL6-201ENST00000226317 HSP90AB4PQ58FF6 505 aa20.01■□□□□ 0.79
CXCL6-201ENST00000226317 TFCP2Q12800 502 aa20■□□□□ 0.79
CXCL6-201ENST00000226317 VGLL2Q8N8G2 317 aa20■□□□□ 0.79
CXCL6-201ENST00000226317 EXOC6BQ9Y2D4 811 aa20■□□□□ 0.79
CXCL6-201ENST00000226317 IFIT1P09914 478 aaKnown RBP19.99■□□□□ 0.79
CXCL6-201ENST00000226317 DBNDD1Q9H9R9 158 aa19.99■□□□□ 0.79
CXCL6-201ENST00000226317 ZNRF3Q9ULT6 936 aa19.99■□□□□ 0.79
CXCL6-201ENST00000226317 AKAP2Q9Y2D5 859 aa19.99■□□□□ 0.79
CXCL6-201ENST00000226317 TXNRD3Q86VQ6 643 aa19.99■□□□□ 0.79
CXCL6-201ENST00000226317 LPIN2Q92539 896 aa19.99■□□□□ 0.79
CXCL6-201ENST00000226317 YY1P25490 414 aa19.98■□□□□ 0.79
CXCL6-201ENST00000226317 KLRK1P26718 216 aa19.98■□□□□ 0.79
CXCL6-201ENST00000226317 EIF6P56537 245 aaKnown RBP19.98■□□□□ 0.79
CXCL6-201ENST00000226317 FER1L6Q2WGJ9 1857 aa19.98■□□□□ 0.79
CXCL6-201ENST00000226317 DPY19L2Q6NUT2 758 aa19.98■□□□□ 0.79
CXCL6-201ENST00000226317 ERC1Q8IUD2 1116 aa19.98■□□□□ 0.79
CXCL6-201ENST00000226317 MED23Q9ULK4 1368 aa19.98■□□□□ 0.79
CXCL6-201ENST00000226317 LRRC37AA6NMS7 1700 aa19.97■□□□□ 0.79
CXCL6-201ENST00000226317 FZD9O00144 591 aa19.97■□□□□ 0.79
CXCL6-201ENST00000226317 SASH1O94885 1247 aa19.97■□□□□ 0.79
CXCL6-201ENST00000226317 SLC5A1P13866 664 aa19.97■□□□□ 0.79
CXCL6-201ENST00000226317 ATP2B3Q16720 1220 aa19.97■□□□□ 0.79
CXCL6-201ENST00000226317 CAVIN4Q5BKX8 364 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms