RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 GNG11P61952 73 aa18.57■□□□□ 0.56
HDAC5-201ENST00000225983 CRNKL1Q9BZJ0 848 aaKnown RBP18.57■□□□□ 0.56
HDAC5-201ENST00000225983 CCDC12Q8WUD4 166 aaPredicted RBP18.57■□□□□ 0.56
HDAC5-201ENST00000225983 CUL5Q93034 780 aa18.57■□□□□ 0.56
HDAC5-201ENST00000225983 ABCC10Q5T3U5 1492 aa18.57■□□□□ 0.56
HDAC5-201ENST00000225983 LUZP1Q86V48 1076 aa18.57■□□□□ 0.56
HDAC5-201ENST00000225983 PAF1Q8N7H5 531 aa18.57■□□□□ 0.56
HDAC5-201ENST00000225983 SBNO2Q9Y2G9 1366 aa18.57■□□□□ 0.56
HDAC5-201ENST00000225983 LDHCP07864 332 aa18.56■□□□□ 0.56
HDAC5-201ENST00000225983 SKILP12757 684 aa18.56■□□□□ 0.56
HDAC5-201ENST00000225983 IFIT1BQ5T764 474 aaKnown RBP18.56■□□□□ 0.56
HDAC5-201ENST00000225983 CCDC40Q4G0X9 1142 aa18.56■□□□□ 0.56
HDAC5-201ENST00000225983 N4BP3O15049 544 aa18.56■□□□□ 0.56
HDAC5-201ENST00000225983 IL13P35225 146 aa18.56■□□□□ 0.56
HDAC5-201ENST00000225983 RUFY3Q7L099 469 aa18.56■□□□□ 0.56
HDAC5-201ENST00000225983 VPS36Q86VN1 386 aa18.56■□□□□ 0.56
HDAC5-201ENST00000225983 MAP9Q49MG5 647 aa18.56■□□□□ 0.56
HDAC5-201ENST00000225983 NBPF6Q5VWK0 638 aa18.56■□□□□ 0.56
HDAC5-201ENST00000225983 NBPF5PQ86XG9 351 aaPredicted RBP18.56■□□□□ 0.56
HDAC5-201ENST00000225983 NBPF4Q96M43 638 aa18.56■□□□□ 0.56
HDAC5-201ENST00000225983 AMPD3Q01432 767 aa18.55■□□□□ 0.56
HDAC5-201ENST00000225983 RNF113AO15541 343 aaKnown RBP18.55■□□□□ 0.56
HDAC5-201ENST00000225983 TCERG1LQ5VWI1 586 aa18.55■□□□□ 0.56
HDAC5-201ENST00000225983 HELBQ8NG08 1087 aaPredicted RBP18.55■□□□□ 0.56
HDAC5-201ENST00000225983 ATP6V1AP38606 617 aa18.55■□□□□ 0.56
HDAC5-201ENST00000225983 TYRO3Q06418 890 aa18.55■□□□□ 0.56
HDAC5-201ENST00000225983 RRAGBQ5VZM2 374 aa18.55■□□□□ 0.56
HDAC5-201ENST00000225983 ESR2Q92731 530 aa18.55■□□□□ 0.56
HDAC5-201ENST00000225983 SPTY2D1Q68D10 685 aaPredicted RBP18.55■□□□□ 0.56
HDAC5-201ENST00000225983 ANKRD18AQ8IVF6 992 aa18.55■□□□□ 0.56
HDAC5-201ENST00000225983 PAFAH1B1P43034 410 aa18.54■□□□□ 0.56
HDAC5-201ENST00000225983 PRIMPOLQ96LW4 560 aa18.54■□□□□ 0.56
HDAC5-201ENST00000225983 RNMTO43148 476 aaKnown RBP18.54■□□□□ 0.56
HDAC5-201ENST00000225983 TRIM47Q96LD4 638 aa18.54■□□□□ 0.56
HDAC5-201ENST00000225983 GCP02774 474 aa18.54■□□□□ 0.56
HDAC5-201ENST00000225983 CNNM2Q9H8M5 875 aa18.54■□□□□ 0.56
HDAC5-201ENST00000225983 ZKSCAN5Q9Y2L8 839 aa18.54■□□□□ 0.56
HDAC5-201ENST00000225983 DYNC1I1O14576 645 aa18.54■□□□□ 0.56
HDAC5-201ENST00000225983 NPHP3Q7Z494 1330 aa18.54■□□□□ 0.56
HDAC5-201ENST00000225983 CCDC113Q9H0I3 377 aa18.53■□□□□ 0.56
HDAC5-201ENST00000225983 PTPDC1A2A3K4 754 aa18.53■□□□□ 0.56
HDAC5-201ENST00000225983 KIF20AO95235 890 aa18.53■□□□□ 0.56
HDAC5-201ENST00000225983 RTL1A6NKG5 1358 aa18.53■□□□□ 0.56
HDAC5-201ENST00000225983 RXRAP19793 462 aa18.53■□□□□ 0.56
HDAC5-201ENST00000225983 PAXBP1Q9Y5B6 917 aa18.53■□□□□ 0.56
HDAC5-201ENST00000225983 SPTLC2O15270 562 aa18.53■□□□□ 0.56
HDAC5-201ENST00000225983 TSPY3P0CV98 308 aa18.53■□□□□ 0.56
HDAC5-201ENST00000225983 TSPY8P0CW00 308 aa18.53■□□□□ 0.56
HDAC5-201ENST00000225983 RFC4P35249 363 aa18.53■□□□□ 0.56
HDAC5-201ENST00000225983 INTS4Q96HW7 963 aaKnown RBP18.53■□□□□ 0.56
HDAC5-201ENST00000225983 SYT1P21579 422 aa18.52■□□□□ 0.56
HDAC5-201ENST00000225983 GOLGA6L9A6NEM1 432 aa18.52■□□□□ 0.56
HDAC5-201ENST00000225983 PLCD4Q9BRC7 762 aa18.52■□□□□ 0.56
HDAC5-201ENST00000225983 NIP7Q9Y221 180 aaKnown RBP eCLIP18.52■□□□□ 0.56
HDAC5-201ENST00000225983 KCNA6P17658 529 aa18.52■□□□□ 0.55
HDAC5-201ENST00000225983 PYM1Q9BRP8 204 aaKnown RBP18.52■□□□□ 0.55
HDAC5-201ENST00000225983 LMOD1P29536 600 aaPredicted RBP18.52■□□□□ 0.55
HDAC5-201ENST00000225983 MIGA1Q8NAN2 632 aa18.52■□□□□ 0.55
HDAC5-201ENST00000225983 CCDC171Q6TFL3 1326 aa18.52■□□□□ 0.55
HDAC5-201ENST00000225983 MAST1Q9Y2H9 1570 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 NAA16Q6N069 864 aaPredicted RBP18.51■□□□□ 0.55
HDAC5-201ENST00000225983 TMTC2Q8N394 836 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 GOLGA6L7A0A1B0GV03 622 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 POTEJP0CG39 1038 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 GOPCQ9HD26 462 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 NPC1L1Q9UHC9 1359 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 LIG1P18858 919 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 MCM3P25205 808 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 EXOC1Q9NV70 894 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 IBSPP21815 317 aaPredicted RBP18.51■□□□□ 0.55
HDAC5-201ENST00000225983 STAT6P42226 847 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 DHX32Q7L7V1 743 aaKnown RBP18.51■□□□□ 0.55
HDAC5-201ENST00000225983 HEATR3Q7Z4Q2 680 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 SIRT1Q96EB6 747 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 ALS2CR12Q96Q35 445 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 JADE2Q9NQC1 790 aa18.51■□□□□ 0.55
HDAC5-201ENST00000225983 NBPF7P0C2Y1 421 aaPredicted RBP18.5■□□□□ 0.55
HDAC5-201ENST00000225983 CCDC129Q6ZRS4 1044 aa18.5■□□□□ 0.55
HDAC5-201ENST00000225983 FAM114A1Q8IWE2 563 aa18.5■□□□□ 0.55
HDAC5-201ENST00000225983 KLHDC4Q8TBB5 520 aa18.5■□□□□ 0.55
HDAC5-201ENST00000225983 DNAI1Q9UI46 699 aa18.5■□□□□ 0.55
HDAC5-201ENST00000225983 TMCO5BA8MYB1 307 aa18.5■□□□□ 0.55
HDAC5-201ENST00000225983 DHX58Q96C10 678 aa18.5■□□□□ 0.55
HDAC5-201ENST00000225983 DISP1Q96F81 1524 aa18.5■□□□□ 0.55
HDAC5-201ENST00000225983 DZIP3Q86Y13 1208 aaKnown RBP18.5■□□□□ 0.55
HDAC5-201ENST00000225983 IP6K1Q92551 441 aa18.5■□□□□ 0.55
HDAC5-201ENST00000225983 SHTN1A0MZ66 631 aa18.49■□□□□ 0.55
HDAC5-201ENST00000225983 TRIM21P19474 475 aaKnown RBP18.49■□□□□ 0.55
HDAC5-201ENST00000225983 MAPK8IP2Q13387 824 aaPredicted RBP18.49■□□□□ 0.55
HDAC5-201ENST00000225983 MAGEB6Q8N7X4 407 aa18.49■□□□□ 0.55
HDAC5-201ENST00000225983 RNF216Q9NWF9 866 aaPredicted RBP18.49■□□□□ 0.55
HDAC5-201ENST00000225983 MYO1BO43795 1136 aa18.49■□□□□ 0.55
HDAC5-201ENST00000225983 IL2RBP14784 551 aa18.49■□□□□ 0.55
HDAC5-201ENST00000225983 IRS4O14654 1257 aaPredicted RBP18.49■□□□□ 0.55
HDAC5-201ENST00000225983 USP8P40818 1118 aa18.49■□□□□ 0.55
HDAC5-201ENST00000225983 UTP14AQ9BVJ6 771 aaKnown RBP18.49■□□□□ 0.55
HDAC5-201ENST00000225983 RMND1Q9NWS8 449 aa18.49■□□□□ 0.55
HDAC5-201ENST00000225983 BCCIPQ9P287 314 aaKnown RBP eCLIP18.49■□□□□ 0.55
HDAC5-201ENST00000225983 DTNBO60941 627 aa18.48■□□□□ 0.55
HDAC5-201ENST00000225983 PTGS1P23219 599 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms