RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 FLIIQ13045 1269 aa22.97■■□□□ 1.27
PFN1-201ENST00000225655 CWF19L2Q2TBE0 894 aaKnown RBP22.97■■□□□ 1.27
PFN1-201ENST00000225655 ANKRD18AQ8IVF6 992 aa22.97■■□□□ 1.27
PFN1-201ENST00000225655 ZC3H15Q8WU90 426 aaKnown RBP22.97■■□□□ 1.27
PFN1-201ENST00000225655 CCDC85AQ96PX6 553 aaPredicted RBP22.97■■□□□ 1.27
PFN1-201ENST00000225655 ANKIB1Q9P2G1 1089 aa22.97■■□□□ 1.27
PFN1-201ENST00000225655 CNOT7Q9UIV1 285 aaKnown RBP22.97■■□□□ 1.27
PFN1-201ENST00000225655 PSMD14O00487 310 aa22.96■■□□□ 1.27
PFN1-201ENST00000225655 ECE2O60344 883 aa22.96■■□□□ 1.27
PFN1-201ENST00000225655 VAMP4O75379 141 aa22.96■■□□□ 1.27
PFN1-201ENST00000225655 DEFB115Q30KQ5 88 aa22.96■■□□□ 1.27
PFN1-201ENST00000225655 DPF2Q92785 391 aa22.96■■□□□ 1.27
PFN1-201ENST00000225655 ZC3H12CQ9C0D7 883 aaKnown RBP22.96■■□□□ 1.27
PFN1-201ENST00000225655 GGA1Q9UJY5 639 aa22.96■■□□□ 1.27
PFN1-201ENST00000225655 ABT1Q9ULW3 272 aaKnown RBP22.96■■□□□ 1.27
PFN1-201ENST00000225655 ZBED9Q6R2W3 1325 aa22.96■■□□□ 1.27
PFN1-201ENST00000225655 H7C1D1 291 aa22.95■■□□□ 1.26
PFN1-201ENST00000225655 H7C1W4 665 aa22.95■■□□□ 1.26
PFN1-201ENST00000225655 TRAF5O00463 557 aa22.95■■□□□ 1.26
PFN1-201ENST00000225655 UFL1O94874 794 aa22.95■■□□□ 1.26
PFN1-201ENST00000225655 FMR1Q06787 632 aaKnown RBP eCLIP22.95■■□□□ 1.26
PFN1-201ENST00000225655 DOK7Q18PE1 504 aa22.95■■□□□ 1.26
PFN1-201ENST00000225655 MICALL2Q8IY33 904 aa22.95■■□□□ 1.26
PFN1-201ENST00000225655 RTL9Q8NET4 1388 aa22.95■■□□□ 1.26
PFN1-201ENST00000225655 TTLL11Q8NHH1 800 aa22.95■■□□□ 1.26
PFN1-201ENST00000225655 GPR101Q96P66 508 aaPredicted RBP22.95■■□□□ 1.26
PFN1-201ENST00000225655 CDC5LQ99459 802 aaKnown RBP22.95■■□□□ 1.26
PFN1-201ENST00000225655 ZBTB12Q9Y330 459 aaPredicted RBP22.95■■□□□ 1.26
PFN1-201ENST00000225655 XDHP47989 1333 aa22.94■■□□□ 1.26
PFN1-201ENST00000225655 RPS12P25398 132 aaKnown RBP22.94■■□□□ 1.26
PFN1-201ENST00000225655 HIRAP54198 1017 aaPredicted RBP22.94■■□□□ 1.26
PFN1-201ENST00000225655 EXOSC9Q06265 439 aaKnown RBP22.94■■□□□ 1.26
PFN1-201ENST00000225655 SCN9AQ15858 1988 aa22.93■■□□□ 1.26
PFN1-201ENST00000225655 SHTN1A0MZ66 631 aa22.93■■□□□ 1.26
PFN1-201ENST00000225655 FKBP5Q13451 457 aaPredicted RBP22.93■■□□□ 1.26
PFN1-201ENST00000225655 CST9Q5W186 159 aa22.93■■□□□ 1.26
PFN1-201ENST00000225655 UBE3BQ7Z3V4 1068 aa22.93■■□□□ 1.26
PFN1-201ENST00000225655 TRPM4Q8TD43 1214 aa22.93■■□□□ 1.26
PFN1-201ENST00000225655 KCNQ5Q9NR82 932 aa22.93■■□□□ 1.26
PFN1-201ENST00000225655 SPEF2Q9C093 1822 aa22.92■■□□□ 1.26
PFN1-201ENST00000225655 GCKRQ14397 625 aa22.92■■□□□ 1.26
PFN1-201ENST00000225655 DNAAF4Q8WXU2 420 aa22.92■■□□□ 1.26
PFN1-201ENST00000225655 GREM2Q9H772 168 aa22.92■■□□□ 1.26
PFN1-201ENST00000225655 LINS1Q8NG48 757 aa22.91■■□□□ 1.26
PFN1-201ENST00000225655 PLA2G12BQ9BX93 195 aa22.91■■□□□ 1.26
PFN1-201ENST00000225655 SPINK5Q9NQ38 1064 aaPredicted RBP22.91■■□□□ 1.26
PFN1-201ENST00000225655 BSDC1Q9NW68 430 aaPredicted RBP22.91■■□□□ 1.26
PFN1-201ENST00000225655 PSME4Q14997 1843 aa22.91■■□□□ 1.26
PFN1-201ENST00000225655 WDR33Q9C0J8 1336 aaKnown RBP22.9■■□□□ 1.26
PFN1-201ENST00000225655 G3V3G9 751 aa22.9■■□□□ 1.26
PFN1-201ENST00000225655 VIL1P09327 827 aaKnown RBP22.9■■□□□ 1.26
PFN1-201ENST00000225655 ATP2B4P23634 1241 aa22.9■■□□□ 1.26
PFN1-201ENST00000225655 DCAF8Q5TAQ9 597 aa22.9■■□□□ 1.26
PFN1-201ENST00000225655 GLIS2Q9BZE0 524 aaPredicted RBP22.9■■□□□ 1.26
PFN1-201ENST00000225655 CASP7P55210 303 aa22.89■■□□□ 1.25
PFN1-201ENST00000225655 SLFN5Q08AF3 891 aa22.89■■□□□ 1.25
PFN1-201ENST00000225655 CDC37L1Q7L3B6 337 aa22.89■■□□□ 1.25
PFN1-201ENST00000225655 TLL2Q9Y6L7 1015 aa22.89■■□□□ 1.25
PFN1-201ENST00000225655 ZNF609O15014 1411 aa22.89■■□□□ 1.25
PFN1-201ENST00000225655 THSD7BQ9C0I4 1608 aa22.89■■□□□ 1.25
PFN1-201ENST00000225655 SAMD7Q7Z3H4 446 aa22.88■■□□□ 1.25
PFN1-201ENST00000225655 YTHDC1Q96MU7 727 aaKnown RBP22.88■■□□□ 1.25
PFN1-201ENST00000225655 WBP1LQ9NX94 342 aa22.88■■□□□ 1.25
PFN1-201ENST00000225655 MINPP1Q9UNW1 487 aa22.88■■□□□ 1.25
PFN1-201ENST00000225655 FOXN1O15353 648 aa22.87■■□□□ 1.25
PFN1-201ENST00000225655 CELF2O95319 508 aaKnown RBP22.87■■□□□ 1.25
PFN1-201ENST00000225655 TNS4Q8IZW8 715 aa22.87■■□□□ 1.25
PFN1-201ENST00000225655 AIDAQ96BJ3 306 aa22.87■■□□□ 1.25
PFN1-201ENST00000225655 EGFRP00533 1210 aa22.86■■□□□ 1.25
PFN1-201ENST00000225655 ECE1P42892 770 aa22.86■■□□□ 1.25
PFN1-201ENST00000225655 TBC1D10BQ4KMP7 808 aaPredicted RBP22.86■■□□□ 1.25
PFN1-201ENST00000225655 MED23Q9ULK4 1368 aa22.86■■□□□ 1.25
PFN1-201ENST00000225655 CSF1RP07333 972 aa22.85■■□□□ 1.25
PFN1-201ENST00000225655 IGHMBP2P38935 993 aaKnown RBP22.85■■□□□ 1.25
PFN1-201ENST00000225655 PODNQ7Z5L7 613 aa22.85■■□□□ 1.25
PFN1-201ENST00000225655 SAPCD2Q86UD0 394 aa22.85■■□□□ 1.25
PFN1-201ENST00000225655 CDCA7LQ96GN5 454 aa22.85■■□□□ 1.25
PFN1-201ENST00000225655 CAPNS2Q96L46 248 aa22.85■■□□□ 1.25
PFN1-201ENST00000225655 POLR2AP24928 1970 aaKnown RBP22.84■■□□□ 1.25
PFN1-201ENST00000225655 ITGA6P23229 1130 aa22.84■■□□□ 1.25
PFN1-201ENST00000225655 MAP2K1Q02750 393 aaPredicted RBP22.84■■□□□ 1.25
PFN1-201ENST00000225655 PAXIP1Q6ZW49 1069 aaPredicted RBP22.84■■□□□ 1.25
PFN1-201ENST00000225655 AGBL3Q8NEM8 1001 aa22.84■■□□□ 1.25
PFN1-201ENST00000225655 WTIPA6NIX2 430 aaPredicted RBP22.83■■□□□ 1.25
PFN1-201ENST00000225655 F6X3S4 739 aa22.83■■□□□ 1.25
PFN1-201ENST00000225655 CTCFP49711 727 aaPredicted RBP22.83■■□□□ 1.25
PFN1-201ENST00000225655 CCT4P50991 539 aaKnown RBP22.83■■□□□ 1.25
PFN1-201ENST00000225655 FAM161AQ3B820 660 aa22.83■■□□□ 1.25
PFN1-201ENST00000225655 BEND3Q5T5X7 828 aa22.83■■□□□ 1.25
PFN1-201ENST00000225655 CYP4F22Q6NT55 531 aa22.83■■□□□ 1.25
PFN1-201ENST00000225655 RSBN1LQ6PCB5 846 aaPredicted RBP22.83■■□□□ 1.25
PFN1-201ENST00000225655 USP48Q86UV5 1035 aa22.83■■□□□ 1.25
PFN1-201ENST00000225655 HHIPL1Q96JK4 782 aa22.83■■□□□ 1.25
PFN1-201ENST00000225655 ZNF280AP59817 542 aaPredicted RBP22.82■■□□□ 1.24
PFN1-201ENST00000225655 KIF4BQ2VIQ3 1234 aa22.82■■□□□ 1.24
PFN1-201ENST00000225655 RBM26Q5T8P6 1007 aaKnown RBP22.82■■□□□ 1.24
PFN1-201ENST00000225655 KRT26Q7Z3Y9 468 aa22.82■■□□□ 1.24
PFN1-201ENST00000225655 ZNF408Q9H9D4 720 aa22.82■■□□□ 1.24
PFN1-201ENST00000225655 PRDM10Q9NQV6 1147 aa22.82■■□□□ 1.24
PFN1-201ENST00000225655 USP17L3A6NCW0 530 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 307.2 ms