RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 RGPD3A6NKT7 1758 aaPredicted RBP18.9■□□□□ 0.62
LAPTM4A-201ENST00000175091 RGPD4Q7Z3J3 1758 aa18.9■□□□□ 0.62
LAPTM4A-201ENST00000175091 ADRA2BP18089 450 aa18.9■□□□□ 0.62
LAPTM4A-201ENST00000175091 ERFEQ4G0M1 354 aa18.9■□□□□ 0.62
LAPTM4A-201ENST00000175091 DNAJC2Q99543 621 aaKnown RBP18.9■□□□□ 0.62
LAPTM4A-201ENST00000175091 NMIQ13287 307 aaPredicted RBP18.89■□□□□ 0.61
LAPTM4A-201ENST00000175091 ATP2B3Q16720 1220 aa18.89■□□□□ 0.61
LAPTM4A-201ENST00000175091 XAGE2Q96GT9 111 aa18.89■□□□□ 0.61
LAPTM4A-201ENST00000175091 PALD1Q9ULE6 856 aa18.89■□□□□ 0.61
LAPTM4A-201ENST00000175091 NDUFB9Q9Y6M9 179 aa18.89■□□□□ 0.61
LAPTM4A-201ENST00000175091 MROH5Q6ZUA9 1318 aa18.89■□□□□ 0.61
LAPTM4A-201ENST00000175091 TAF1P21675 1872 aa18.89■□□□□ 0.61
LAPTM4A-201ENST00000175091 ADORA1P30542 326 aa18.88■□□□□ 0.61
LAPTM4A-201ENST00000175091 HSPA4P34932 840 aa18.88■□□□□ 0.61
LAPTM4A-201ENST00000175091 FAM227BQ96M60 508 aa18.88■□□□□ 0.61
LAPTM4A-201ENST00000175091 NYXQ9GZU5 481 aa18.88■□□□□ 0.61
LAPTM4A-201ENST00000175091 SEC31BQ9NQW1 1179 aa18.88■□□□□ 0.61
LAPTM4A-201ENST00000175091 A0A0D9SFI3 127 aa18.88■□□□□ 0.61
LAPTM4A-201ENST00000175091 PDE8BO95263 885 aa18.88■□□□□ 0.61
LAPTM4A-201ENST00000175091 TRAPPC3LQ5T215 181 aa18.88■□□□□ 0.61
LAPTM4A-201ENST00000175091 BICDL1Q6ZP65 573 aa18.88■□□□□ 0.61
LAPTM4A-201ENST00000175091 KBTBD3Q8NAB2 608 aa18.88■□□□□ 0.61
LAPTM4A-201ENST00000175091 SETDB2Q96T68 719 aa18.88■□□□□ 0.61
LAPTM4A-201ENST00000175091 ANP32EQ9BTT0 268 aa18.88■□□□□ 0.61
LAPTM4A-201ENST00000175091 PHF14O94880 888 aa18.87■□□□□ 0.61
LAPTM4A-201ENST00000175091 RFC4P35249 363 aa18.87■□□□□ 0.61
LAPTM4A-201ENST00000175091 SF3B3Q15393 1217 aaKnown RBP18.87■□□□□ 0.61
LAPTM4A-201ENST00000175091 SLC10A5Q5PT55 438 aa18.87■□□□□ 0.61
LAPTM4A-201ENST00000175091 TICAM2Q86XR7 235 aa18.87■□□□□ 0.61
LAPTM4A-201ENST00000175091 ANTXR1Q9H6X2 564 aa18.87■□□□□ 0.61
LAPTM4A-201ENST00000175091 PAG1Q9NWQ8 432 aa18.87■□□□□ 0.61
LAPTM4A-201ENST00000175091 CCDC171Q6TFL3 1326 aa18.86■□□□□ 0.61
LAPTM4A-201ENST00000175091 K7ELQ4 463 aaPredicted RBP18.86■□□□□ 0.61
LAPTM4A-201ENST00000175091 IFIT1P09914 478 aaKnown RBP18.86■□□□□ 0.61
LAPTM4A-201ENST00000175091 CCDC158Q5M9N0 1113 aa18.86■□□□□ 0.61
LAPTM4A-201ENST00000175091 KIAA1211Q6ZU35 1233 aa18.86■□□□□ 0.61
LAPTM4A-201ENST00000175091 C3orf67Q6ZVT6 689 aa18.86■□□□□ 0.61
LAPTM4A-201ENST00000175091 DDX46Q7L014 1031 aaKnown RBP18.86■□□□□ 0.61
LAPTM4A-201ENST00000175091 CARMIL3Q8ND23 1372 aa18.86■□□□□ 0.61
LAPTM4A-201ENST00000175091 MPHOSPH8Q99549 860 aa18.86■□□□□ 0.61
LAPTM4A-201ENST00000175091 GOLIM4O00461 696 aa18.85■□□□□ 0.61
LAPTM4A-201ENST00000175091 FGFR2P21802 821 aa18.85■□□□□ 0.61
LAPTM4A-201ENST00000175091 PUM3Q15397 648 aaKnown RBP18.85■□□□□ 0.61
LAPTM4A-201ENST00000175091 TTC39AQ5SRH9 613 aa18.85■□□□□ 0.61
LAPTM4A-201ENST00000175091 NBPF5PQ86XG9 351 aaPredicted RBP18.85■□□□□ 0.61
LAPTM4A-201ENST00000175091 SLKQ9H2G2 1235 aaPredicted RBP18.85■□□□□ 0.61
LAPTM4A-201ENST00000175091 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.84■□□□□ 0.61
LAPTM4A-201ENST00000175091 SSFA2P28290 1259 aa18.84■□□□□ 0.61
LAPTM4A-201ENST00000175091 IGHMBP2P38935 993 aaKnown RBP18.84■□□□□ 0.61
LAPTM4A-201ENST00000175091 GORABQ5T7V8 394 aa18.84■□□□□ 0.61
LAPTM4A-201ENST00000175091 ZNF512BQ96KM6 892 aaPredicted RBP18.84■□□□□ 0.61
LAPTM4A-201ENST00000175091 CDC5LQ99459 802 aaKnown RBP18.84■□□□□ 0.61
LAPTM4A-201ENST00000175091 DOCK2Q92608 1830 aa18.84■□□□□ 0.61
LAPTM4A-201ENST00000175091 ST18O60284 1047 aa18.83■□□□□ 0.61
LAPTM4A-201ENST00000175091 PTH1RQ03431 593 aa18.83■□□□□ 0.61
LAPTM4A-201ENST00000175091 TXNRD1Q16881 649 aa18.83■□□□□ 0.61
LAPTM4A-201ENST00000175091 LPIN2Q92539 896 aa18.83■□□□□ 0.61
LAPTM4A-201ENST00000175091 RXRBP28702 533 aa18.83■□□□□ 0.6
LAPTM4A-201ENST00000175091 ZNF589Q86UQ0 364 aaPredicted RBP18.83■□□□□ 0.6
LAPTM4A-201ENST00000175091 GTF2E1P29083 439 aaPredicted RBP18.82■□□□□ 0.6
LAPTM4A-201ENST00000175091 SCARF1Q14162 830 aa18.82■□□□□ 0.6
LAPTM4A-201ENST00000175091 PROM2Q8N271 834 aa18.82■□□□□ 0.6
LAPTM4A-201ENST00000175091 MYO5AQ9Y4I1 1855 aaKnown RBP18.82■□□□□ 0.6
LAPTM4A-201ENST00000175091 HMGB2P26583 209 aaKnown RBP18.81■□□□□ 0.6
LAPTM4A-201ENST00000175091 NFIXQ14938 502 aa18.81■□□□□ 0.6
LAPTM4A-201ENST00000175091 TPTE2Q6XPS3 522 aa18.81■□□□□ 0.6
LAPTM4A-201ENST00000175091 SNX14Q9Y5W7 946 aa18.81■□□□□ 0.6
LAPTM4A-201ENST00000175091 PLSCR1O15162 318 aa18.81■□□□□ 0.6
LAPTM4A-201ENST00000175091 HELBQ8NG08 1087 aaPredicted RBP18.81■□□□□ 0.6
LAPTM4A-201ENST00000175091 MAP4K1Q92918 833 aa18.81■□□□□ 0.6
LAPTM4A-201ENST00000175091 KCNB2Q92953 911 aa18.81■□□□□ 0.6
LAPTM4A-201ENST00000175091 CHGBP05060 677 aa18.8■□□□□ 0.6
LAPTM4A-201ENST00000175091 SLC5A1P13866 664 aa18.8■□□□□ 0.6
LAPTM4A-201ENST00000175091 ARID4AP29374 1257 aaPredicted RBP18.8■□□□□ 0.6
LAPTM4A-201ENST00000175091 MCAMP43121 646 aa18.8■□□□□ 0.6
LAPTM4A-201ENST00000175091 IL27Q8NEV9 243 aa18.8■□□□□ 0.6
LAPTM4A-201ENST00000175091 GYS1P13807 737 aa18.79■□□□□ 0.6
LAPTM4A-201ENST00000175091 DDIT3P35638 169 aa18.79■□□□□ 0.6
LAPTM4A-201ENST00000175091 CHRNDQ07001 517 aa18.79■□□□□ 0.6
LAPTM4A-201ENST00000175091 NECTIN1Q15223 517 aa18.79■□□□□ 0.6
LAPTM4A-201ENST00000175091 ANKRD18AQ8IVF6 992 aa18.79■□□□□ 0.6
LAPTM4A-201ENST00000175091 RASEFQ8IZ41 740 aa18.79■□□□□ 0.6
LAPTM4A-201ENST00000175091 SPRYD3Q8NCJ5 442 aa18.79■□□□□ 0.6
LAPTM4A-201ENST00000175091 NLRP3Q96P20 1036 aa18.79■□□□□ 0.6
LAPTM4A-201ENST00000175091 RGS17Q9UGC6 210 aaPredicted RBP18.79■□□□□ 0.6
LAPTM4A-201ENST00000175091 RBM8AQ9Y5S9 174 aaKnown RBP18.79■□□□□ 0.6
LAPTM4A-201ENST00000175091 TAF5LO75529 589 aa18.78■□□□□ 0.6
LAPTM4A-201ENST00000175091 NEK4P51957 841 aa18.78■□□□□ 0.6
LAPTM4A-201ENST00000175091 FKBP4Q02790 459 aaKnown RBP eCLIP18.78■□□□□ 0.6
LAPTM4A-201ENST00000175091 MCMDC2Q4G0Z9 681 aa18.78■□□□□ 0.6
LAPTM4A-201ENST00000175091 CCDC102BQ68D86 513 aa18.78■□□□□ 0.6
LAPTM4A-201ENST00000175091 BSDC1Q9NW68 430 aaPredicted RBP18.78■□□□□ 0.6
LAPTM4A-201ENST00000175091 ZAP70P43403 619 aa18.78■□□□□ 0.6
LAPTM4A-201ENST00000175091 PHKA1P46020 1223 aa18.78■□□□□ 0.6
LAPTM4A-201ENST00000175091 ZMYM1Q5SVZ6 1142 aa18.78■□□□□ 0.6
LAPTM4A-201ENST00000175091 PI16Q6UXB8 463 aa18.78■□□□□ 0.6
LAPTM4A-201ENST00000175091 SEC62Q99442 399 aaKnown RBP18.78■□□□□ 0.6
LAPTM4A-201ENST00000175091 HELLSQ9NRZ9 838 aa18.78■□□□□ 0.6
LAPTM4A-201ENST00000175091 CELF1Q92879 486 aaKnown RBP18.77■□□□□ 0.6
LAPTM4A-201ENST00000175091 NRXN2Q9P2S2 1712 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms