RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 BMP2KLQ5H9B9 411 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 DBNDD2Q9BQY9 259 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 NYXQ9GZU5 481 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 BOLA2Q9H3K6 86 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 LY75O60449 1722 aa12.81□□□□□ -0.36
CD4-201ENST00000011653 PSDA5PKW4 1024 aaPredicted RBP12.81□□□□□ -0.36
CD4-201ENST00000011653 GSPT1P15170 499 aaKnown RBP12.81□□□□□ -0.36
CD4-201ENST00000011653 PLCB2Q00722 1185 aa12.81□□□□□ -0.36
CD4-201ENST00000011653 ERC1Q8IUD2 1116 aa12.81□□□□□ -0.36
CD4-201ENST00000011653 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
CD4-201ENST00000011653 CDHR2Q9BYE9 1310 aa12.81□□□□□ -0.36
CD4-201ENST00000011653 DDX11L8A8MPP1 907 aa12.81□□□□□ -0.36
CD4-201ENST00000011653 CSF1RP07333 972 aa12.81□□□□□ -0.36
CD4-201ENST00000011653 PRR5LQ6MZQ0 368 aa12.81□□□□□ -0.36
CD4-201ENST00000011653 ATG9AQ7Z3C6 839 aa12.81□□□□□ -0.36
CD4-201ENST00000011653 CELF1Q92879 486 aaKnown RBP12.81□□□□□ -0.36
CD4-201ENST00000011653 SNX21Q969T3 373 aa12.81□□□□□ -0.36
CD4-201ENST00000011653 TAF1LQ8IZX4 1826 aa12.81□□□□□ -0.36
CD4-201ENST00000011653 WTIPA6NIX2 430 aaPredicted RBP12.8□□□□□ -0.36
CD4-201ENST00000011653 ZBTB7AO95365 584 aa12.8□□□□□ -0.36
CD4-201ENST00000011653 IGHMBP2P38935 993 aaKnown RBP12.8□□□□□ -0.36
CD4-201ENST00000011653 EDC3Q96F86 508 aaKnown RBP12.8□□□□□ -0.36
CD4-201ENST00000011653 DNAJC2Q99543 621 aaKnown RBP12.8□□□□□ -0.36
CD4-201ENST00000011653 TRAK2O60296 914 aa12.79□□□□□ -0.36
CD4-201ENST00000011653 TNNI3KQ59H18 835 aa12.79□□□□□ -0.36
CD4-201ENST00000011653 SNRKQ9NRH2 765 aa12.79□□□□□ -0.36
CD4-201ENST00000011653 ATF5Q9Y2D1 282 aaPredicted RBP12.79□□□□□ -0.36
CD4-201ENST00000011653 FPGT-TNNI3KV9GXZ4 949 aa12.79□□□□□ -0.36
CD4-201ENST00000011653 TTC22Q5TAA0 569 aa12.79□□□□□ -0.36
CD4-201ENST00000011653 IQSEC3Q9UPP2 1182 aaPredicted RBP12.79□□□□□ -0.36
CD4-201ENST00000011653 CARMIL3Q8ND23 1372 aa12.79□□□□□ -0.36
CD4-201ENST00000011653 SDSP20132 328 aa12.79□□□□□ -0.36
CD4-201ENST00000011653 ADORA1P30542 326 aa12.79□□□□□ -0.36
CD4-201ENST00000011653 IL15P40933 162 aaPredicted RBP12.79□□□□□ -0.36
CD4-201ENST00000011653 ST5P78524 1137 aa12.79□□□□□ -0.36
CD4-201ENST00000011653 R3HDM1Q15032 1099 aaKnown RBP12.79□□□□□ -0.36
CD4-201ENST00000011653 NLGN1Q8N2Q7 840 aa12.79□□□□□ -0.36
CD4-201ENST00000011653 PLA2G12BQ9BX93 195 aa12.79□□□□□ -0.36
CD4-201ENST00000011653 GZF1Q9H116 711 aaPredicted RBP12.79□□□□□ -0.36
CD4-201ENST00000011653 PARP3Q9Y6F1 533 aa12.79□□□□□ -0.36
CD4-201ENST00000011653 A0A1B0GUL7 405 aa12.78□□□□□ -0.36
CD4-201ENST00000011653 FSD2A1L4K1 749 aa12.78□□□□□ -0.36
CD4-201ENST00000011653 DDX46Q7L014 1031 aaKnown RBP12.78□□□□□ -0.36
CD4-201ENST00000011653 ANKRD18AQ8IVF6 992 aa12.78□□□□□ -0.36
CD4-201ENST00000011653 DBNLQ9UJU6 430 aaKnown RBP12.78□□□□□ -0.36
CD4-201ENST00000011653 RPGRQ92834 1020 aaKnown RBP12.78□□□□□ -0.36
CD4-201ENST00000011653 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.36
CD4-201ENST00000011653 POLRMTO00411 1230 aaKnown RBP12.77□□□□□ -0.37
CD4-201ENST00000011653 HSP90B1P14625 803 aaKnown RBP12.77□□□□□ -0.37
CD4-201ENST00000011653 CDC5LQ99459 802 aaKnown RBP12.77□□□□□ -0.37
CD4-201ENST00000011653 TM4SF1P30408 202 aa12.77□□□□□ -0.37
CD4-201ENST00000011653 ZNF622Q969S3 477 aaKnown RBP eCLIP12.77□□□□□ -0.37
CD4-201ENST00000011653 GPATCH3Q96I76 525 aa12.77□□□□□ -0.37
CD4-201ENST00000011653 XRCC6P12956 609 aaKnown RBP eCLIP12.76□□□□□ -0.37
CD4-201ENST00000011653 ATP2B3Q16720 1220 aa12.76□□□□□ -0.37
CD4-201ENST00000011653 FLAD1Q8NFF5 587 aa12.76□□□□□ -0.37
CD4-201ENST00000011653 ECHDC1Q9NTX5 307 aa12.76□□□□□ -0.37
CD4-201ENST00000011653 N4BP2Q86UW6 1770 aaPredicted RBP12.76□□□□□ -0.37
CD4-201ENST00000011653 DDIT3P35638 169 aa12.76□□□□□ -0.37
CD4-201ENST00000011653 FKBP4Q02790 459 aaKnown RBP eCLIP12.76□□□□□ -0.37
CD4-201ENST00000011653 TAF1P21675 1872 aa12.76□□□□□ -0.37
CD4-201ENST00000011653 KCNJ4P48050 445 aa12.75□□□□□ -0.37
CD4-201ENST00000011653 RPS8P62241 208 aaKnown RBP12.75□□□□□ -0.37
CD4-201ENST00000011653 GPR101Q96P66 508 aaPredicted RBP12.75□□□□□ -0.37
CD4-201ENST00000011653 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
CD4-201ENST00000011653 CHRNDQ07001 517 aa12.75□□□□□ -0.37
CD4-201ENST00000011653 PI16Q6UXB8 463 aa12.75□□□□□ -0.37
CD4-201ENST00000011653 UBR3Q6ZT12 1888 aa12.75□□□□□ -0.37
CD4-201ENST00000011653 HSP90AA1P07900 732 aaKnown RBP12.75□□□□□ -0.37
CD4-201ENST00000011653 OLFM4Q6UX06 510 aa12.75□□□□□ -0.37
CD4-201ENST00000011653 TBC1D9Q6ZT07 1266 aa12.75□□□□□ -0.37
CD4-201ENST00000011653 UPF1Q92900 1129 aaKnown RBP eCLIP12.75□□□□□ -0.37
CD4-201ENST00000011653 XAGE2Q96GT9 111 aa12.75□□□□□ -0.37
CD4-201ENST00000011653 GBP4Q96PP9 640 aa12.75□□□□□ -0.37
CD4-201ENST00000011653 ANKIB1Q9P2G1 1089 aa12.75□□□□□ -0.37
CD4-201ENST00000011653 JAG2Q9Y219 1238 aa12.75□□□□□ -0.37
CD4-201ENST00000011653 MRE11P49959 708 aa12.74□□□□□ -0.37
CD4-201ENST00000011653 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
CD4-201ENST00000011653 ERC2O15083 957 aa12.74□□□□□ -0.37
CD4-201ENST00000011653 CHGBP05060 677 aa12.74□□□□□ -0.37
CD4-201ENST00000011653 CHRNA5P30532 468 aa12.74□□□□□ -0.37
CD4-201ENST00000011653 TTC39AQ5SRH9 613 aa12.74□□□□□ -0.37
CD4-201ENST00000011653 ISY1Q9ULR0 285 aaKnown RBP12.74□□□□□ -0.37
CD4-201ENST00000011653 PTMSP20962 102 aa12.73□□□□□ -0.37
CD4-201ENST00000011653 PI4K2BQ8TCG2 481 aa12.73□□□□□ -0.37
CD4-201ENST00000011653 NSFL1CQ9UNZ2 370 aaKnown RBP12.73□□□□□ -0.37
CD4-201ENST00000011653 C4AP0C0L4 1744 aa12.73□□□□□ -0.37
CD4-201ENST00000011653 GLRX3O76003 335 aaKnown RBP12.73□□□□□ -0.37
CD4-201ENST00000011653 PDE8BO95263 885 aa12.73□□□□□ -0.37
CD4-201ENST00000011653 SF3B3Q15393 1217 aaKnown RBP12.73□□□□□ -0.37
CD4-201ENST00000011653 SLFNL1Q499Z3 407 aa12.73□□□□□ -0.37
CD4-201ENST00000011653 TNS1Q9HBL0 1735 aaKnown RBP12.73□□□□□ -0.37
CD4-201ENST00000011653 RREB1Q92766 1687 aa12.73□□□□□ -0.37
CD4-201ENST00000011653 GOLIM4O00461 696 aa12.73□□□□□ -0.37
CD4-201ENST00000011653 CDC45O75419 566 aa12.73□□□□□ -0.37
CD4-201ENST00000011653 SLC10A5Q5PT55 438 aa12.73□□□□□ -0.37
CD4-201ENST00000011653 TNPO1Q92973 898 aaKnown RBP12.73□□□□□ -0.37
CD4-201ENST00000011653 FSD1Q9BTV5 496 aa12.73□□□□□ -0.37
CD4-201ENST00000011653 IFIT1P09914 478 aaKnown RBP12.72□□□□□ -0.37
CD4-201ENST00000011653 HMGB2P26583 209 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms