RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 HDAC5Q9UQL6 1122 aa12.57□□□□□ -0.4
CD9-201ENST00000009180 ATP6V0A2Q9Y487 856 aa12.57□□□□□ -0.4
CD9-201ENST00000009180 SNED1Q8TER0 1413 aa12.56□□□□□ -0.4
CD9-201ENST00000009180 BBOX1O75936 387 aa12.56□□□□□ -0.4
CD9-201ENST00000009180 IGHMBP2P38935 993 aaKnown RBP12.56□□□□□ -0.4
CD9-201ENST00000009180 PTPN12Q05209 780 aaKnown RBP12.56□□□□□ -0.4
CD9-201ENST00000009180 SIRT2Q8IXJ6 389 aa12.56□□□□□ -0.4
CD9-201ENST00000009180 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
CD9-201ENST00000009180 GPSM2P81274 684 aa12.55□□□□□ -0.4
CD9-201ENST00000009180 ATP8B2P98198 1209 aa12.55□□□□□ -0.4
CD9-201ENST00000009180 RASSF7Q02833 373 aa12.55□□□□□ -0.4
CD9-201ENST00000009180 LRRC24Q50LG9 513 aa12.55□□□□□ -0.4
CD9-201ENST00000009180 CCDC93Q567U6 631 aa12.55□□□□□ -0.4
CD9-201ENST00000009180 MPHOSPH8Q99549 860 aa12.55□□□□□ -0.4
CD9-201ENST00000009180 CHMP4BQ9H444 224 aaKnown RBP12.55□□□□□ -0.4
CD9-201ENST00000009180 PCDHB15Q9Y5E8 787 aa12.55□□□□□ -0.4
CD9-201ENST00000009180 DUOX1Q9NRD9 1551 aa12.55□□□□□ -0.4
CD9-201ENST00000009180 WTIPA6NIX2 430 aaPredicted RBP12.54□□□□□ -0.4
CD9-201ENST00000009180 POLA2Q14181 598 aa12.54□□□□□ -0.4
CD9-201ENST00000009180 LDHAL6AQ6ZMR3 332 aa12.54□□□□□ -0.4
CD9-201ENST00000009180 ARHGAP27Q6ZUM4 889 aa12.54□□□□□ -0.4
CD9-201ENST00000009180 SP8Q8IXZ3 490 aa12.54□□□□□ -0.4
CD9-201ENST00000009180 HELBQ8NG08 1087 aaPredicted RBP12.54□□□□□ -0.4
CD9-201ENST00000009180 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
CD9-201ENST00000009180 GPR101Q96P66 508 aaPredicted RBP12.54□□□□□ -0.4
CD9-201ENST00000009180 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
CD9-201ENST00000009180 BSDC1Q9NW68 430 aaPredicted RBP12.54□□□□□ -0.4
CD9-201ENST00000009180 MINPP1Q9UNW1 487 aa12.54□□□□□ -0.4
CD9-201ENST00000009180 UTRNP46939 3433 aa12.54□□□□□ -0.4
CD9-201ENST00000009180 SNAP23O00161 211 aa12.53□□□□□ -0.4
CD9-201ENST00000009180 NFKBIEO00221 500 aa12.53□□□□□ -0.4
CD9-201ENST00000009180 TAF5LO75529 589 aa12.53□□□□□ -0.4
CD9-201ENST00000009180 PRELPP51888 382 aa12.53□□□□□ -0.4
CD9-201ENST00000009180 CHRNDQ07001 517 aa12.53□□□□□ -0.4
CD9-201ENST00000009180 TMC4Q7Z404 712 aa12.53□□□□□ -0.4
CD9-201ENST00000009180 LTBP1Q14766 1721 aa12.53□□□□□ -0.4
CD9-201ENST00000009180 A0A1B0GUL6 1792 aa12.53□□□□□ -0.4
CD9-201ENST00000009180 EYA2O00167 538 aa12.52□□□□□ -0.41
CD9-201ENST00000009180 DPP8Q6V1X1 898 aaPredicted RBP12.52□□□□□ -0.41
CD9-201ENST00000009180 ATG9AQ7Z3C6 839 aa12.52□□□□□ -0.41
CD9-201ENST00000009180 RPAP2Q8IXW5 612 aaPredicted RBP12.52□□□□□ -0.41
CD9-201ENST00000009180 MPNDQ8N594 471 aa12.52□□□□□ -0.41
CD9-201ENST00000009180 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
CD9-201ENST00000009180 NSFL1CQ9UNZ2 370 aaKnown RBP12.52□□□□□ -0.41
CD9-201ENST00000009180 EXOC6BQ9Y2D4 811 aa12.52□□□□□ -0.41
CD9-201ENST00000009180 RIPOR2Q9Y4F9 1068 aa12.52□□□□□ -0.41
CD9-201ENST00000009180 METTL24Q5JXM2 366 aa12.51□□□□□ -0.41
CD9-201ENST00000009180 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
CD9-201ENST00000009180 RTKN2Q8IZC4 609 aa12.51□□□□□ -0.41
CD9-201ENST00000009180 ZNF277Q9NRM2 450 aaPredicted RBP12.51□□□□□ -0.41
CD9-201ENST00000009180 ANKIB1Q9P2G1 1089 aa12.51□□□□□ -0.41
CD9-201ENST00000009180 POLLQ9UGP5 575 aa12.51□□□□□ -0.41
CD9-201ENST00000009180 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.51□□□□□ -0.41
CD9-201ENST00000009180 C6orf229H3BNL8 230 aa12.5□□□□□ -0.41
CD9-201ENST00000009180 SURF6O75683 361 aaKnown RBP12.5□□□□□ -0.41
CD9-201ENST00000009180 CAPN15O75808 1086 aa12.5□□□□□ -0.41
CD9-201ENST00000009180 UFL1O94874 794 aa12.5□□□□□ -0.41
CD9-201ENST00000009180 FKBP4Q02790 459 aaKnown RBP eCLIP12.5□□□□□ -0.41
CD9-201ENST00000009180 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
CD9-201ENST00000009180 TBC1D16Q8TBP0 767 aa12.5□□□□□ -0.41
CD9-201ENST00000009180 TMX4Q9H1E5 349 aaPredicted RBP12.5□□□□□ -0.41
CD9-201ENST00000009180 TAOK3Q9H2K8 898 aa12.5□□□□□ -0.41
CD9-201ENST00000009180 XDHP47989 1333 aa12.5□□□□□ -0.41
CD9-201ENST00000009180 COL4A5P29400 1685 aa12.5□□□□□ -0.41
CD9-201ENST00000009180 FER1L6Q2WGJ9 1857 aa12.5□□□□□ -0.41
CD9-201ENST00000009180 MROH5Q6ZUA9 1318 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 APBB1O00213 710 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 GRIN3BO60391 1043 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 HMMRO75330 724 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 CIAO1O76071 339 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 NEFLP07196 543 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 KLRK1P26718 216 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 TFCP2Q12800 502 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 OS9Q13438 667 aaPredicted RBP12.49□□□□□ -0.41
CD9-201ENST00000009180 TPRNQ4KMQ1 711 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 VGLL2Q8N8G2 317 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 PSMD1Q99460 953 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 RTFDC1Q9BY42 306 aaPredicted RBP12.49□□□□□ -0.41
CD9-201ENST00000009180 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 GGA1Q9UJY5 639 aa12.49□□□□□ -0.41
CD9-201ENST00000009180 RIMBP2O15034 1052 aa12.48□□□□□ -0.41
CD9-201ENST00000009180 SASH1O94885 1247 aa12.48□□□□□ -0.41
CD9-201ENST00000009180 IL15P40933 162 aaPredicted RBP12.48□□□□□ -0.41
CD9-201ENST00000009180 KCNJ4P48050 445 aa12.48□□□□□ -0.41
CD9-201ENST00000009180 G3BP1Q13283 466 aaKnown RBP eCLIP12.48□□□□□ -0.41
CD9-201ENST00000009180 AOC3Q16853 763 aa12.48□□□□□ -0.41
CD9-201ENST00000009180 ANKRD2Q9GZV1 360 aa12.48□□□□□ -0.41
CD9-201ENST00000009180 NOP58Q9Y2X3 529 aaKnown RBP12.48□□□□□ -0.41
CD9-201ENST00000009180 ZNF804BA4D1E1 1349 aa12.47□□□□□ -0.41
CD9-201ENST00000009180 LTBP3Q9NS15 1303 aa12.47□□□□□ -0.41
CD9-201ENST00000009180 ATP2B4P23634 1241 aa12.47□□□□□ -0.41
CD9-201ENST00000009180 TXNRD3Q86VQ6 643 aa12.47□□□□□ -0.41
CD9-201ENST00000009180 BCL11AQ9H165 835 aa12.47□□□□□ -0.41
CD9-201ENST00000009180 FBXO3Q9UK99 471 aa12.47□□□□□ -0.41
CD9-201ENST00000009180 PPIP5K2O43314 1243 aa12.46□□□□□ -0.41
CD9-201ENST00000009180 PDE8BO95263 885 aa12.46□□□□□ -0.41
CD9-201ENST00000009180 LMNB1P20700 586 aa12.46□□□□□ -0.41
CD9-201ENST00000009180 IARSP41252 1262 aaKnown RBP12.46□□□□□ -0.41
CD9-201ENST00000009180 AAMPQ13685 434 aa12.46□□□□□ -0.41
CD9-201ENST00000009180 DOK7Q18PE1 504 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms