RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Olfr819K7N727 320 aa10.28□□□□□ -0.76
Trim39-205ENSMUST00000173369 B4galnt3Q6L8S8 986 aa10.28□□□□□ -0.76
Trim39-205ENSMUST00000173369 McamQ8R2Y2 648 aaKnown RBP10.28□□□□□ -0.76
Trim39-205ENSMUST00000173369 Eif2s2Q99L45 331 aaKnown RBP10.28□□□□□ -0.76
Trim39-205ENSMUST00000173369 Mrc1Q61830 1456 aa10.28□□□□□ -0.76
Trim39-205ENSMUST00000173369 Ccdc146E9Q9F7 977 aa10.28□□□□□ -0.76
Trim39-205ENSMUST00000173369 Prl3d2F6R3P9 224 aa10.28□□□□□ -0.76
Trim39-205ENSMUST00000173369 Trim27Q62158 513 aa10.28□□□□□ -0.76
Trim39-205ENSMUST00000173369 Mum1Q6DID5 682 aa10.28□□□□□ -0.76
Trim39-205ENSMUST00000173369 PrimpolQ6P1E7 537 aa10.28□□□□□ -0.76
Trim39-205ENSMUST00000173369 Aldh1l2Q8K009 923 aa10.28□□□□□ -0.76
Trim39-205ENSMUST00000173369 Nphp1Q9QY53 687 aa10.28□□□□□ -0.76
Trim39-205ENSMUST00000173369 StrcQ8VIM6 1809 aa10.27□□□□□ -0.76
Trim39-205ENSMUST00000173369 TprnA2AI08 749 aaKnown RBP10.27□□□□□ -0.76
Trim39-205ENSMUST00000173369 Cfap70D3YVL2 1141 aa10.27□□□□□ -0.76
Trim39-205ENSMUST00000173369 Ms4a5Q810P8 197 aa10.27□□□□□ -0.76
Trim39-205ENSMUST00000173369 FktnQ8R507 461 aa10.27□□□□□ -0.76
Trim39-205ENSMUST00000173369 Supt16hQ920B9 1047 aa10.27□□□□□ -0.76
Trim39-205ENSMUST00000173369 Dydc2Q9D3X8 139 aa10.27□□□□□ -0.76
Trim39-205ENSMUST00000173369 Noa1Q9JJG9 693 aaKnown RBP10.27□□□□□ -0.76
Trim39-205ENSMUST00000173369 Kcnq5Q9JK45 933 aa10.27□□□□□ -0.76
Trim39-205ENSMUST00000173369 Kifc2O08672 792 aa10.27□□□□□ -0.77
Trim39-205ENSMUST00000173369 Tm6sf1P58749 370 aa10.27□□□□□ -0.77
Trim39-205ENSMUST00000173369 Slc38a10Q5I012 1090 aa10.27□□□□□ -0.77
Trim39-205ENSMUST00000173369 Atg9aQ68FE2 551 aa10.27□□□□□ -0.77
Trim39-205ENSMUST00000173369 Ttc14Q9CSP9 761 aa10.27□□□□□ -0.77
Trim39-205ENSMUST00000173369 Myoz2Q9JJW5 264 aa10.27□□□□□ -0.77
Trim39-205ENSMUST00000173369 Scaf8Q6DID3 1268 aa10.27□□□□□ -0.77
Trim39-205ENSMUST00000173369 Fchsd1Q6PFY1 688 aa10.27□□□□□ -0.77
Trim39-205ENSMUST00000173369 Ccne2Q9Z238 404 aa10.27□□□□□ -0.77
Trim39-205ENSMUST00000173369 Pnmal2G3X9N3 661 aa10.26□□□□□ -0.77
Trim39-205ENSMUST00000173369 Eya2O08575 532 aa10.26□□□□□ -0.77
Trim39-205ENSMUST00000173369 Mmp8O70138 465 aa10.26□□□□□ -0.77
Trim39-205ENSMUST00000173369 Fam43aQ8BUP8 424 aa10.26□□□□□ -0.77
Trim39-205ENSMUST00000173369 Egfem1Q8C088 590 aa10.26□□□□□ -0.77
Trim39-205ENSMUST00000173369 CalcaP70160 136 aa10.26□□□□□ -0.77
Trim39-205ENSMUST00000173369 Zc3h15Q3TIV5 426 aaKnown RBP10.26□□□□□ -0.77
Trim39-205ENSMUST00000173369 Plekho1Q9JIY0 408 aa10.26□□□□□ -0.77
Trim39-205ENSMUST00000173369 Terf1P70371 421 aa10.25□□□□□ -0.77
Trim39-205ENSMUST00000173369 Fam83bQ0VBM2 1012 aa10.25□□□□□ -0.77
Trim39-205ENSMUST00000173369 Ltv1Q6NSQ7 470 aaKnown RBP10.25□□□□□ -0.77
Trim39-205ENSMUST00000173369 Pcsk7Q61139 770 aa10.25□□□□□ -0.77
Trim39-205ENSMUST00000173369 Pram1Q6BCL1 675 aa10.25□□□□□ -0.77
Trim39-205ENSMUST00000173369 Slc26a8Q8R0C3 999 aa10.25□□□□□ -0.77
Trim39-205ENSMUST00000173369 Cyp2ab1S4R196 498 aa10.25□□□□□ -0.77
Trim39-205ENSMUST00000173369 Ube4aE9Q735 1028 aa10.24□□□□□ -0.77
Trim39-205ENSMUST00000173369 Nol8Q3UHX0 1147 aaKnown RBP10.24□□□□□ -0.77
Trim39-205ENSMUST00000173369 Zfp91Q62511 572 aa10.24□□□□□ -0.77
Trim39-205ENSMUST00000173369 Atp2b4Q6Q477 1205 aa10.24□□□□□ -0.77
Trim39-205ENSMUST00000173369 Tmem87bQ8BKU8 555 aa10.24□□□□□ -0.77
Trim39-205ENSMUST00000173369 Znf219Q6IQX8 726 aa10.24□□□□□ -0.77
Trim39-205ENSMUST00000173369 Osbpl5Q9ER64 874 aa10.24□□□□□ -0.77
Trim39-205ENSMUST00000173369 Brd2Q7JJ13 798 aaKnown RBP10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Ufl1Q8CCJ3 793 aaKnown RBP10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 4933402E13RikQ9D4D2 429 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Ambra1A2AH22 1300 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Arap2Q8BZ05 1703 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Atg4a-psA0A0G2JFS9 396 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 GabreA2AMW3 916 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Pde8bE9Q4S1 865 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 VgfQ0VGU4 617 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Large2Q5XPT3 690 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Atg4aQ8C9S8 396 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 CarsQ9ER72 831 aaKnown RBP10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Gm42715A0A087WP63 3095 aaKnown RBP10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Atp2b3Q0VF55 1220 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Ptrh1Q8BW00 204 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Ttc5Q99LG4 440 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Ccdc96Q9CR92 584 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Chmp4bQ9D8B3 224 aaKnown RBP10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Pde3aQ9Z0X4 1141 aa10.23□□□□□ -0.77
Trim39-205ENSMUST00000173369 Sept9Q80UG5 583 aa10.22□□□□□ -0.77
Trim39-205ENSMUST00000173369 Sptlc3Q8BG54 563 aa10.22□□□□□ -0.77
Trim39-205ENSMUST00000173369 Tmc2Q8R4P4 888 aa10.22□□□□□ -0.77
Trim39-205ENSMUST00000173369 ParvgQ9ERD8 331 aa10.22□□□□□ -0.77
Trim39-205ENSMUST00000173369 Zdbf2Q5SS00 2493 aaKnown RBP10.22□□□□□ -0.77
Trim39-205ENSMUST00000173369 Mcmdc2E9Q956 681 aa10.22□□□□□ -0.77
Trim39-205ENSMUST00000173369 GabrdP22933 449 aa10.22□□□□□ -0.77
Trim39-205ENSMUST00000173369 Vps54Q5SPW0 977 aa10.22□□□□□ -0.77
Trim39-205ENSMUST00000173369 DbnlQ62418 436 aa10.22□□□□□ -0.77
Trim39-205ENSMUST00000173369 Glis3Q6XP49 780 aa10.22□□□□□ -0.77
Trim39-205ENSMUST00000173369 BbxQ8VBW5 907 aa10.22□□□□□ -0.77
Trim39-205ENSMUST00000173369 SnrkQ8VDU5 748 aa10.22□□□□□ -0.77
Trim39-205ENSMUST00000173369 Il15P48346 162 aa10.21□□□□□ -0.77
Trim39-205ENSMUST00000173369 Unc5clQ6R653 518 aa10.21□□□□□ -0.77
Trim39-205ENSMUST00000173369 HnrnpuQ8VEK3 800 aaKnown RBP10.21□□□□□ -0.77
Trim39-205ENSMUST00000173369 Greb1lB9EJV3 1913 aa10.21□□□□□ -0.77
Trim39-205ENSMUST00000173369 Mapkapk5O54992 473 aa10.21□□□□□ -0.78
Trim39-205ENSMUST00000173369 XpcP51612 930 aa10.21□□□□□ -0.78
Trim39-205ENSMUST00000173369 Znf692Q3U381 531 aa10.21□□□□□ -0.78
Trim39-205ENSMUST00000173369 Ccdc51Q3URS9 406 aa10.21□□□□□ -0.78
Trim39-205ENSMUST00000173369 Sh3bp5lQ99LH9 392 aa10.21□□□□□ -0.78
Trim39-205ENSMUST00000173369 Dhx30Q99PU8 1217 aaKnown RBP10.21□□□□□ -0.78
Trim39-205ENSMUST00000173369 Pik3ap1Q9EQ32 811 aa10.21□□□□□ -0.78
Trim39-205ENSMUST00000173369 Bcar3Q9QZK2 820 aa10.21□□□□□ -0.78
Trim39-205ENSMUST00000173369 Slfn1Q9Z0I7 337 aa10.21□□□□□ -0.78
Trim39-205ENSMUST00000173369 Irs4Q9Z0Y7 1216 aa10.21□□□□□ -0.78
Trim39-205ENSMUST00000173369 Usp48Q3V0C5 1052 aa10.2□□□□□ -0.78
Trim39-205ENSMUST00000173369 Slc44a4Q91VA1 707 aa10.2□□□□□ -0.78
Trim39-205ENSMUST00000173369 WaslQ91YD9 501 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms