RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Cep135Q6P5D4 1140 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 RgmbQ7TQ33 436 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Nxf7Q80SZ6 620 aaKnown RBP13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Tsen34Q8BMZ5 316 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Golim4Q8BXA1 655 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Slc5a1Q8C3K6 665 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Kcnq3Q8K3F6 873 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Tbc1d4Q8BYJ6 1307 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 D430041D05RikF6ZGR6 1678 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Sipa1l2Q80TE4 1722 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Limch1Q3UH68 1057 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Hmg20bQ9Z104 317 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Aox4Q3TYQ9 1336 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 PtprvP70289 1705 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Kdm6aO70546 1401 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Cyb5rlB1AS42 316 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Taf3Q5HZG4 932 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Ttc19Q8CC21 365 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Pms1Q8K119 917 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Ubxn4Q8VCH8 506 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Arfgef2A2A5R2 1792 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 C5P06684 1680 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Atp10bB1AWN4 1474 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Atp2b1G5E829 1220 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Bin1O08539 588 aaKnown RBP13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Slu7Q8BHJ9 585 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Nek11Q8C0Q4 628 aa13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Kiaa0232Q80U59 1396 aaKnown RBP13.56□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Cdk4P30285 303 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Rad17Q6NXW6 688 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Gpatch3Q8BIY1 525 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Bmp2kQ91Z96 1138 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Dnajc14Q921R4 703 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Nup153E9Q3G8 1462 aaKnown RBP13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Klhl34A2AI76 644 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Zfp397Q7TNK4 527 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Lrrc8aQ80WG5 810 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Tmem119Q8R138 280 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Alpk3Q924C5 1678 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Zscan29E9Q5B4 869 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Dync1i1O88485 628 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 CtifQ6PEE2 600 aaKnown RBP13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Kcnk13Q8R1P5 405 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 TnrQ8BYI9 1358 aa13.55□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Anxa1P10107 346 aaKnown RBP13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Ube2oQ6ZPJ3 1288 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Ankib1Q6ZPS6 1085 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Ano10Q8BH79 659 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Dnaaf2Q8BPI1 814 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Ppm1mQ8BU27 406 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Ift57Q8BXG3 429 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Mrpl44Q9CY73 333 aaKnown RBP13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Dusp10Q9ESS0 483 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Abcc12Q80WJ6 1366 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Ccdc112A0AUP1 442 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Nfatc2ipO09130 412 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Stx1aO35526 288 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Ccdc129Q14B48 1034 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Hand2Q61039 217 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Golph3lQ8R088 285 aaKnown RBP13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Als2Q920R0 1651 aa13.54□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Iqsec3Q3TES0 1195 aa13.53□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Nlrp9bQ66X22 1003 aa13.53□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Ccdc82Q6PG04 518 aa13.53□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Mtmr3Q8K296 1196 aa13.53□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Arap3Q8R5G7 1538 aa13.53□□□□□ -0.24
Col9a1-202ENSMUST00000088349 L1td1Q587J6 782 aaKnown RBP13.53□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Ptcd1Q8C2E4 695 aaKnown RBP13.53□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Fam170aQ66LM6 333 aa13.53□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Spty2d1Q68FG3 682 aa13.53□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Mb21d2Q8C525 428 aa13.53□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Rbm17Q8JZX4 405 aaKnown RBP13.53□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Bcl9Q9D219 1425 aa13.52□□□□□ -0.24
Col9a1-202ENSMUST00000088349 MypnQ5DTJ9 1315 aa13.52□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Clec11aO88200 328 aa13.52□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Tubb6Q922F4 447 aa13.52□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Zkscan4Q5SZT6 480 aa13.52□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Otud6bQ8K2H2 294 aa13.52□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Gm21985Q6P6P5 1106 aa13.51□□□□□ -0.25
Col9a1-202ENSMUST00000088349 CenpqQ9CPQ5 267 aa13.51□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Rufy2Q8R4C2 606 aa13.51□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Hps3Q91VB4 1002 aa13.51□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Bcl11bQ99PV8 884 aa13.51□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Syde2E9PUP1 1314 aa13.51□□□□□ -0.25
Col9a1-202ENSMUST00000088349 RubcnlQ3TD16 648 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Tmem87bQ8BKU8 555 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Tmem67Q8BR76 992 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Erc1Q99MI1 1120 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Scn7aB1AYL1 1681 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 InsrrQ9WTL4 1300 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 MpndQ3TV65 487 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Dhx40Q6PE54 779 aaKnown RBP13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Usp44Q8C2S0 711 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Snw1Q9CSN1 536 aaKnown RBP13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Rbm33Q9CXK9 1231 aaKnown RBP13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 4930548H24RikQ9D496 437 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 IncenpQ9WU62 880 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Cyp2d10P24456 504 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Cers3Q1A3B0 383 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Ripor2Q80U16 1078 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms