RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Nf2P46662 596 aa10.05□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Gse1Q3U3C9 1213 aa10.05□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Tspyl3Q3UYP3 334 aa10.05□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Igbp1Q61249 340 aa10.05□□□□□ -0.8
Ttc28-201ENSMUST00000040111 RragbQ6NTA4 374 aa10.05□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Sos1Q62245 1319 aa10.05□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Jade2Q6ZQF7 829 aa10.05□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Ctr9Q62018 1173 aaKnown RBP10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Sass6Q80UK7 654 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Adck5Q80V03 582 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Ercc6lQ8BHK9 1240 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Knop1Q9Z2Q2 478 aaKnown RBP10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Art2aP17981 287 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Zmym3Q9JLM4 1370 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 TprnA2AI08 749 aaKnown RBP10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 LarsQ8BMJ2 1178 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Nsrp1Q5NCR9 542 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Golga4Q91VW5 2238 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Stx1aO35526 288 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Cep131Q62036 1060 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 StambpQ9CQ26 424 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Naa16Q9DBB4 864 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Atf7Q8R0S1 413 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Zmym4A2A791 1549 aaKnown RBP10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Cavin1O54724 392 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Rnf34Q99KR6 376 aa10.04□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Psmb7P70195 277 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Snx13Q6PHS6 957 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Ncoa5Q91W39 579 aaKnown RBP10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Wasf1Q8R5H6 559 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Cd274Q9EP73 290 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Abcc4E9Q236 1325 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Cpb1B2RS76 415 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Pagr1bF6V0H0 108 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Dnajb6O54946 365 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Pagr1aQ99L02 253 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Cap2Q9CYT6 476 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Eid1Q9DCR4 169 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Serpinb6bO08804 377 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Sult6b1P0CC03 303 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Cep135Q6P5D4 1140 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Naa30Q8CES0 364 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Clip2Q9Z0H8 1047 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Otud7bB2RUR8 840 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Rad23bP54728 416 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Zswim4Q8C7B8 1101 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Tubb6Q922F4 447 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Zbtb43Q9DAI4 467 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Sorbs3Q9R1Z8 733 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Stxbp4Q9WV89 557 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Pde4dQ01063 747 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Tekt3Q6X6Z7 490 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Pafah1b1P63005 410 aaKnown RBP10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Asic4Q7TNS7 539 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Ccdc73Q8CDM4 1066 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Dennd4bQ3U1Y4 1499 aa10.03□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Rapgef3Q8VCC8 918 aa10.02□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Nsd3Q6P2L6 1439 aa10.02□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Traf3ip1Q149C2 625 aa10.02□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Gm12185Q5NCB2 835 aa10.02□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Tti2Q8BGV4 512 aa10.02□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Skor1Q8BX46 964 aa10.02□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Cdan1Q8CC12 1239 aa10.02□□□□□ -0.8
Ttc28-201ENSMUST00000040111 Map2k1P31938 393 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Nfil3O08750 462 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Vps18Q8R307 973 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Fam177a1Q8BR63 207 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Lmbr1Q9JIT0 490 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Gm38392E9Q2A2 434 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Cnga2Q62398 664 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Cfap53Q9D439 514 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Abcc6Q9R1S7 1498 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Eepd1Q3TGW2 569 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Kmt5bQ3U8K7 883 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Emilin2Q8K482 1074 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Terf2ipQ91VL8 393 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Smc1aQ9CU62 1233 aaKnown RBP10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 PdiltQ9DAN1 588 aa10.02□□□□□ -0.81
Ttc28-201ENSMUST00000040111 AatkQ80YE4 1365 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ccdc172Q810N9 267 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Mmel1Q9JLI3 765 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Brd1E9PZ26 1189 aaKnown RBP10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ifit1Q64282 463 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Asic1Q6NXK8 526 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Bloc1s2Q9CWG9 143 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Syde2E9PUP1 1314 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Dnajc25A2ALW5 357 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Trim11Q99PQ2 467 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Adcy10Q8C0T9 1614 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Mcmdc2E9Q956 681 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Fam83bQ0VBM2 1012 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Pdzrn3Q69ZS0 1063 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ano6Q6P9J9 911 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Snw1Q9CSN1 536 aaKnown RBP10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Phkg2Q9DB30 406 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Cnpy2Q9QXT0 182 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 TchpQ3TVW5 497 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Nlrp2Q4PLS0 1046 aaKnown RBP10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Gli2Q0VGT2 1544 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Fam160b2Q80YR2 744 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 629.7 ms