RNA–Protein interactions for RNA: ENSMUST00000033407.12

Cttn-201, Transcript of Src substrate cortactin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cttn, Length 2,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cttn-201ENSMUST00000033407 Utp18Q5SSI6 552 aaKnown RBP13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 Oxsr1Q6P9R2 527 aa13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 CtifQ6PEE2 600 aaKnown RBP13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 Cabp2Q9JLK4 216 aa13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 Thsd7bQ6P4U0 1607 aa13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 Cfap73J3QPZ5 306 aa13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 U2af2P26369 475 aaKnown RBP13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 Nxf2Q4ZGD8 691 aa13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 Ppp1r1bQ60829 194 aa13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 Samm50Q8BGH2 469 aa13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 Stac3Q8BZ71 360 aa13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 Q8C6G1 249 aa13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 Tbc1d8Q9Z1A9 1134 aa13.4□□□□□ -0.26
Cttn-201ENSMUST00000033407 Chl1P70232 1209 aa13.4□□□□□ -0.27
Cttn-201ENSMUST00000033407 WasP70315 520 aa13.4□□□□□ -0.27
Cttn-201ENSMUST00000033407 Tiam2Q6ZPF3 1715 aa13.39□□□□□ -0.27
Cttn-201ENSMUST00000033407 Phf23Q8BSN5 401 aa13.39□□□□□ -0.27
Cttn-201ENSMUST00000033407 Spire2Q8K1S6 718 aa13.39□□□□□ -0.27
Cttn-201ENSMUST00000033407 Zfp831A2ADM8 1628 aa13.39□□□□□ -0.27
Cttn-201ENSMUST00000033407 Ptpdc1Q6NZK8 747 aa13.39□□□□□ -0.27
Cttn-201ENSMUST00000033407 Ints3Q7TPD0 1041 aaKnown RBP13.39□□□□□ -0.27
Cttn-201ENSMUST00000033407 Kcnf1Q7TSH7 493 aa13.39□□□□□ -0.27
Cttn-201ENSMUST00000033407 Nol12Q8BG17 217 aa13.39□□□□□ -0.27
Cttn-201ENSMUST00000033407 Zscan22Q8BGS5 496 aa13.39□□□□□ -0.27
Cttn-201ENSMUST00000033407 Slfnl1Q8BHW9 410 aa13.39□□□□□ -0.27
Cttn-201ENSMUST00000033407 Prune1Q8BIW1 454 aa13.39□□□□□ -0.27
Cttn-201ENSMUST00000033407 Ccdc178Q8CDV0 866 aa13.39□□□□□ -0.27
Cttn-201ENSMUST00000033407 Tpd52l1O54818 204 aa13.38□□□□□ -0.27
Cttn-201ENSMUST00000033407 Slurp2P0DP59 97 aa13.38□□□□□ -0.27
Cttn-201ENSMUST00000033407 Nkx2-3P97334 362 aa13.38□□□□□ -0.27
Cttn-201ENSMUST00000033407 Nav1Q8CH77 1875 aa13.38□□□□□ -0.27
Cttn-201ENSMUST00000033407 Nfatc2ipO09130 412 aa13.38□□□□□ -0.27
Cttn-201ENSMUST00000033407 CalcaP70160 136 aa13.38□□□□□ -0.27
Cttn-201ENSMUST00000033407 Atf5O70191 283 aa13.37□□□□□ -0.27
Cttn-201ENSMUST00000033407 Hmox1P14901 289 aa13.37□□□□□ -0.27
Cttn-201ENSMUST00000033407 Cfap157Q0VFX2 523 aa13.37□□□□□ -0.27
Cttn-201ENSMUST00000033407 Pdzrn3Q69ZS0 1063 aa13.37□□□□□ -0.27
Cttn-201ENSMUST00000033407 Nop14Q8R3N1 860 aaKnown RBP13.37□□□□□ -0.27
Cttn-201ENSMUST00000033407 Noc3lQ8VI84 807 aaKnown RBP13.37□□□□□ -0.27
Cttn-201ENSMUST00000033407 Zfp646Q6NV66 1788 aa13.37□□□□□ -0.27
Cttn-201ENSMUST00000033407 Elmsan1E9Q2I4 1089 aaKnown RBP13.37□□□□□ -0.27
Cttn-201ENSMUST00000033407 Oas2E9Q9A9 742 aa13.37□□□□□ -0.27
Cttn-201ENSMUST00000033407 Sf3a1Q8K4Z5 791 aaKnown RBP13.37□□□□□ -0.27
Cttn-201ENSMUST00000033407 Fam114a1Q9D281 569 aa13.37□□□□□ -0.27
Cttn-201ENSMUST00000033407 PdcQ9QW08 244 aa13.37□□□□□ -0.27
Cttn-201ENSMUST00000033407 Hoxa7P02830 229 aa13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Pdzph1Q8BGR1 1238 aa13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Trip6Q9Z1Y4 480 aa13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Efcab2Q9CQ46 164 aa13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Tktl2Q9D4D4 627 aa13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Stx6Q9JKK1 255 aa13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Nphp1Q9QY53 687 aa13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 MetP16056 1379 aa13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Zkscan7E9PVW1 718 aa13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Mcm3P25206 812 aaKnown RBP13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Bms1Q6PGF5 1284 aaKnown RBP13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Rab3gap1Q80UJ7 981 aa13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Jakmip1Q8BVL9 626 aa13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Naa30Q8CES0 364 aa13.36□□□□□ -0.27
Cttn-201ENSMUST00000033407 Gja5Q01231 358 aa13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Dpf2Q61103 391 aaKnown RBP13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Ccdc155Q80VJ8 648 aa13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Tshz3Q8CGV9 1081 aa13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Cd248Q91V98 765 aa13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Gtpbp4Q99ME9 634 aaKnown RBP13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Slc4a9E9PUP3 929 aa13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 CebpzP53569 1052 aaKnown RBP13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Mcm10Q0VBD2 885 aa13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Ptcd1Q8C2E4 695 aaKnown RBP13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Cchcr1Q8K2I2 770 aa13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Plcd3Q8K2J0 785 aa13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Zbtb1Q91VL9 713 aa13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Tmem132aQ922P8 1018 aa13.35□□□□□ -0.27
Cttn-201ENSMUST00000033407 Taf3Q5HZG4 932 aa13.34□□□□□ -0.27
Cttn-201ENSMUST00000033407 Mylk2Q8VCR8 613 aa13.34□□□□□ -0.27
Cttn-201ENSMUST00000033407 Slx4ipQ9D7Y9 413 aa13.34□□□□□ -0.27
Cttn-201ENSMUST00000033407 Syde2E9PUP1 1314 aa13.34□□□□□ -0.27
Cttn-201ENSMUST00000033407 1700019A02RikA0A087WPV9 146 aa13.34□□□□□ -0.27
Cttn-201ENSMUST00000033407 Gnai2P08752 355 aaKnown RBP13.34□□□□□ -0.27
Cttn-201ENSMUST00000033407 Usp25P57080 1055 aa13.34□□□□□ -0.27
Cttn-201ENSMUST00000033407 Snx13Q6PHS6 957 aa13.34□□□□□ -0.27
Cttn-201ENSMUST00000033407 Pmfbp1Q9WVQ0 1022 aa13.34□□□□□ -0.27
Cttn-201ENSMUST00000033407 Srgap3Q812A2 1099 aa13.33□□□□□ -0.27
Cttn-201ENSMUST00000033407 Rgs19Q9CX84 216 aa13.33□□□□□ -0.27
Cttn-201ENSMUST00000033407 Add3Q9QYB5 706 aaKnown RBP13.33□□□□□ -0.27
Cttn-201ENSMUST00000033407 Sytl4Q9R0Q1 673 aa13.33□□□□□ -0.27
Cttn-201ENSMUST00000033407 Fstl1Q62356 306 aa13.33□□□□□ -0.28
Cttn-201ENSMUST00000033407 Soga3Q6NZL0 945 aa13.33□□□□□ -0.28
Cttn-201ENSMUST00000033407 Fez2Q6TYB5 348 aa13.33□□□□□ -0.28
Cttn-201ENSMUST00000033407 Micall1Q8BGT6 870 aa13.33□□□□□ -0.28
Cttn-201ENSMUST00000033407 Ercc6lQ8BHK9 1240 aa13.33□□□□□ -0.28
Cttn-201ENSMUST00000033407 Smc3Q9CW03 1217 aaKnown RBP13.33□□□□□ -0.28
Cttn-201ENSMUST00000033407 Prr29B1ARI9 187 aa13.33□□□□□ -0.28
Cttn-201ENSMUST00000033407 Mrc1Q61830 1456 aa13.32□□□□□ -0.28
Cttn-201ENSMUST00000033407 Brpf3B2KF05 1204 aaKnown RBP13.32□□□□□ -0.28
Cttn-201ENSMUST00000033407 Ms4a2P20490 235 aa13.32□□□□□ -0.28
Cttn-201ENSMUST00000033407 Nup88Q8CEC0 753 aaKnown RBP13.32□□□□□ -0.28
Cttn-201ENSMUST00000033407 Ms4a1P19437 291 aa13.32□□□□□ -0.28
Cttn-201ENSMUST00000033407 Ttc27Q8CD92 847 aa13.32□□□□□ -0.28
Cttn-201ENSMUST00000033407 Wdr24Q8CFJ9 790 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms