RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Myh13B1AR69 1938 aa10.03□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Celf1P28659 486 aaKnown RBP10.03□□□□□ -0.8
Ssr3-201ENSMUST00000029414 CpvlQ9D3S9 478 aa10.03□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Dpp7Q9ET22 506 aa10.03□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Arfgef1G3X9K3 1846 aaKnown RBP10.03□□□□□ -0.8
Ssr3-201ENSMUST00000029414 CbarpQ66L44 698 aa10.02□□□□□ -0.8
Ssr3-201ENSMUST00000029414 VwdeQ6DFV8 926 aa10.02□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Tor1aip2Q8BYU6 502 aa10.02□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Slc38a10Q5I012 1090 aa10.02□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Tnip1Q9WUU8 647 aa10.02□□□□□ -0.81
Ssr3-201ENSMUST00000029414 InsrrQ9WTL4 1300 aa10.01□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Polr2aP08775 1970 aaKnown RBP10.01□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Myh4Q5SX39 1939 aa10.01□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Q3UPC7 1272 aa10.01□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Pdzrn3Q69ZS0 1063 aa10.01□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Ofd1Q80Z25 1017 aa10.01□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Zdbf2Q5SS00 2493 aaKnown RBP10.01□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Ddx46Q569Z5 1032 aaKnown RBP10.01□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Nlrp9bQ66X22 1003 aa10.01□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Tbc1d8Q9Z1A9 1134 aa10.01□□□□□ -0.81
Ssr3-201ENSMUST00000029414 IntuQ059U7 942 aa10□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Znf710Q3U288 666 aa10□□□□□ -0.81
Ssr3-201ENSMUST00000029414 GpkowQ56A08 488 aa10□□□□□ -0.81
Ssr3-201ENSMUST00000029414 WdpcpQ8C456 722 aa10□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Psmd14O35593 310 aa9.99□□□□□ -0.81
Ssr3-201ENSMUST00000029414 GmpsQ3THK7 693 aa9.99□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Znf496Q5SXI5 585 aa9.99□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Mum1Q6DID5 682 aa9.99□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Prl3d2F6R3P9 224 aa9.99□□□□□ -0.81
Ssr3-201ENSMUST00000029414 AaasP58742 546 aa9.99□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Rps12P63323 132 aaKnown RBP9.99□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Slc14a2Q8R4T9 930 aa9.99□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Ube2q2Q8K2Z8 378 aa9.98□□□□□ -0.81
Ssr3-201ENSMUST00000029414 NyxP83503 476 aa9.98□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Nlgn2Q69ZK9 836 aa9.98□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Aldh1l1Q8R0Y6 902 aa9.98□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Socs7Q8VHQ2 579 aa9.98□□□□□ -0.81
Ssr3-201ENSMUST00000029414 SisF8VQM5 1818 aa9.97□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Bin2D3Z6Q9 489 aa9.97□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Magea8O89012 320 aa9.97□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Ell2Q3UKU1 639 aa9.97□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Angel2Q8K1C0 544 aa9.97□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Tmem143Q8VD26 458 aa9.97□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Plekho1Q9JIY0 408 aa9.97□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Kcnq5Q9JK45 933 aa9.97□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Tmem67Q8BR76 992 aa9.97□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Fzd9Q9R216 592 aa9.97□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Chd5A2A8L1 1946 aa9.97□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Tpx2A2APB8 745 aaKnown RBP9.96□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Gpr182P43142 395 aa9.96□□□□□ -0.81
Ssr3-201ENSMUST00000029414 VegfbP49766 207 aa9.96□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Adora1Q60612 326 aa9.96□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Gm2163Q6PCY5 473 aa9.96□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Glrx3Q9CQM9 337 aa9.96□□□□□ -0.81
Ssr3-201ENSMUST00000029414 Anxa1P10107 346 aaKnown RBP9.96□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Tlr7P58681 1050 aa9.96□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Ptrh1Q8BW00 204 aa9.96□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Igf2bp3Q9CPN8 579 aaKnown RBP9.96□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Cdca7Q9D0M2 382 aa9.96□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Mtmr2Q9Z2D1 643 aa9.96□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Csrnp1P59054 583 aa9.96□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Tbc1d32Q3URV1 1296 aa9.96□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Scaf8Q6DID3 1268 aa9.96□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Klf15Q9EPW2 415 aa9.96□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Tnnt3Q9QZ47 272 aa9.96□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Usp17lbE9Q9U0 468 aa9.95□□□□□ -0.82
Ssr3-201ENSMUST00000029414 VgfQ0VGU4 617 aa9.95□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Sh3bp5Q9Z131 463 aa9.95□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Usp34Q6ZQ93 3582 aa9.95□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Cnot7Q60809 285 aa9.95□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Ascc2Q91WR3 749 aa9.95□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Mrpl12Q9DB15 201 aaKnown RBP9.95□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Hs6st3Q9QYK4 470 aa9.95□□□□□ -0.82
Ssr3-201ENSMUST00000029414 GabrdP22933 449 aa9.94□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Nutm1Q8BHP2 1126 aa9.94□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Ncoa5Q91W39 579 aaKnown RBP9.94□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Znf330Q922H9 316 aa9.94□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Sh3bp5lQ99LH9 392 aa9.94□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Osbpl5Q9ER64 874 aa9.94□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Llgl2Q3TJ91 1027 aa9.94□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Ccdc51Q3URS9 406 aa9.94□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Jarid2Q62315 1234 aa9.94□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Stk36Q69ZM6 1316 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Ftl2P49945 183 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Terf1P70371 421 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Plekhf1Q3TB82 279 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Agtpbp1Q641K1 1218 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Ddx31Q6NZQ2 687 aaKnown RBP9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Ppil2Q9D787 521 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Scn10aQ6QIY3 1958 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Bcorl1A2AQH4 1781 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Brpf1B2RRD7 1212 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Casp1P29452 402 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 LeprP48356 1162 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Mmp14P53690 582 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Plbd2Q3TCN2 594 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 EspnlQ3UYR4 1005 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Nell2Q61220 819 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Tgfb1i1Q62219 461 aa9.93□□□□□ -0.82
Ssr3-201ENSMUST00000029414 Fbxo33Q8VE08 562 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms