RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 NPR2P20594 1047 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 CDAP32320 146 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 EFNA4P52798 201 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 DSCR9P59020 149 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 GALK2Q01415 458 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 CLEC2AQ6UVW9 174 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 CYP2R1Q6VVX0 501 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 LRRC18Q8N456 261 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 CLDN22Q8N7P3 220 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 NSMAFQ92636 917 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 RHNO1Q9BSD3 238 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 KCNN2Q9H2S1 579 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 C1orf198Q9H425 327 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 IL1RAPQ9NPH3 570 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 GRHPRQ9UBQ7 328 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 FBXO9Q9UK97 447 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-231ENST00000641939 AURKCQ9UQB9 309 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 SIGLEC7Q9Y286 467 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 ADAM18Q9Y3Q7 739 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 YLPM1P49750 1951 aaKnown RBP12.99□□□□□ -0.33
PHGDH-231ENST00000641939 F12P00748 615 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-231ENST00000641939 T-ENOLP0DO92 83 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 ATP6V1B2P21281 511 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 SGCAQ16586 387 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 MTX3Q5HYI7 312 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 RINLQ6ZS11 566 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 Q71RC1 249 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-231ENST00000641939 ZDHHC21Q8IVQ6 265 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 SLC30A7Q8NEW0 376 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 NABP1Q96AH0 204 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 RSRC1Q96IZ7 334 aaKnown RBP12.98□□□□□ -0.33
PHGDH-231ENST00000641939 Q96M85 177 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 REG4Q9BYZ8 158 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 MUC13Q9H3R2 512 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 SLC7A8Q9UHI5 535 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 CMAHPQ9Y471 501 aa12.98□□□□□ -0.33
PHGDH-231ENST00000641939 IQCMA0A1B0GVH7 501 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 TMEM129A0AVI4 362 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 UNC119BA6NIH7 251 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 H7C1C5 153 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 XKRYO14609 159 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 AHCYL1O43865 530 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 GPRIN2O60269 458 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 PTHP01270 115 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 MMP7P09237 267 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-231ENST00000641939 RRM2P31350 389 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 GLRXP35754 106 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 GUCA1AP43080 201 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-231ENST00000641939 PPOXP50336 477 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 RPS23P62266 143 aaKnown RBP12.97□□□□□ -0.33
PHGDH-231ENST00000641939 LCN6P62502 163 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 PLP2Q04941 152 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 FAM27BQ5VT28 67 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 GPR139Q6DWJ6 353 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 FAM122BQ7Z309 247 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 SVOPLQ8N434 492 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 ZNF525Q8N782 197 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 OR10H5Q8NGA6 315 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 ZNF570Q96NI8 536 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 SORCS2Q96PQ0 1159 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 GPX7Q96SL4 187 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-231ENST00000641939 DOK1Q99704 481 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 VRK1Q99986 396 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-231ENST00000641939 CCNB1IP1Q9NPC3 277 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 FKBP7Q9Y680 259 aa12.97□□□□□ -0.33
PHGDH-231ENST00000641939 IGHV4-30-2A0A087WSY4 118 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 SLC22A23A1A5C7 686 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 LY6HO94772 140 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 CSF3P09919 207 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 EVX1P49640 407 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 HSF2Q03933 536 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 TRIM25Q14258 630 aaKnown RBP12.96□□□□□ -0.33
PHGDH-231ENST00000641939 TBC1D28Q2M2D7 210 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 MESTQ5EB52 335 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 LCN8Q6JVE9 175 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 THSD4Q6ZMP0 1018 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 FOXL2NBQ6ZUU3 175 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 ZER1Q7Z7L7 766 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 DHFR2Q86XF0 187 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 MAPK1IP1LQ8NDC0 245 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 OR1J2Q8NGS2 313 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 BCAS4Q8TDM0 211 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 FAM168AQ92567 244 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 MRPL24Q96A35 216 aaKnown RBP12.96□□□□□ -0.33
PHGDH-231ENST00000641939 GPA33Q99795 319 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 RAB1BQ9H0U4 201 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 C1orf21Q9H246 121 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 LRMDAQ9H2I8 198 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 CDH20Q9HBT6 801 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 NRIP3Q9NQ35 241 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 TAS2R1Q9NYW7 299 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 IL20RAQ9UHF4 553 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 TMCC3Q9ULS5 477 aa12.96□□□□□ -0.33
PHGDH-231ENST00000641939 PRPF19Q9UMS4 504 aaKnown RBP12.96□□□□□ -0.33
PHGDH-231ENST00000641939 TEX13CA0A0J9YWL9 993 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 A0A1W2PPL8 197 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 TCRBV5S2A0A599 114 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 PRSS37A4D1T9 235 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 OR10H3O60404 316 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 KRT36O76013 467 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms