RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 FOXN4Q96NZ1 517 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 MOGAT1Q96PD6 335 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 MBOAT4Q96T53 435 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 ZNF184Q99676 751 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-222ENST00000641587 GPA33Q99795 319 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 PIMREGQ9BSJ6 248 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 BPESC1Q9GZL8 116 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 NDEL1Q9GZM8 345 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 FKRPQ9H9S5 495 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 NANSQ9NR45 359 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 MALT1Q9UDY8 824 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 MOKQ9UQ07 419 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 HDGFL3Q9Y3E1 203 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 CDH10Q9Y6N8 788 aa8.72□□□□□ -1.01
PHGDH-222ENST00000641587 DYSFO75923 2080 aa8.71□□□□□ -1.01
PHGDH-222ENST00000641587 H0YJX3 145 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 BLOC1S5-TXNDC5H3BN57 136 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 NPIPB7O75200 414 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 OR6A2O95222 327 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 TGFAP01135 160 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 IGF2P01344 180 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 OSMP13725 252 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 GRPRP30550 384 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 APOBEC3AP31941 199 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-222ENST00000641587 RPL4P36578 427 aaKnown RBP8.71□□□□□ -1.02
PHGDH-222ENST00000641587 SLC9A3P48764 834 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 CLK1P49759 484 aaKnown RBP8.71□□□□□ -1.02
PHGDH-222ENST00000641587 COX10Q12887 443 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 PMS2P3Q13401 168 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 MFSD13AQ14CX5 517 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 SWI5Q1ZZU3 235 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 ZBED5Q49AG3 693 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 TSPO2Q5TGU0 170 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 ZNF620Q6ZNG0 422 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 RASSF6Q6ZTQ3 369 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 TMPRSS11FQ6ZWK6 438 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 SSX8Q7RTT4 187 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 DEPDC4Q8N2C3 294 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 PARP8Q8N3A8 854 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-222ENST00000641587 MFSD8Q8NHS3 518 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 ZHX1-C8orf76Q96EF9 292 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 ZNF570Q96NI8 536 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 RDH12Q96NR8 316 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 ADI1Q9BV57 179 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 PTDSS2Q9BVG9 487 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 Q9H521 79 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 EGLN3Q9H6Z9 239 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 SLC17A5Q9NRA2 495 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 SLC7A10Q9NS82 523 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 EMC3Q9P0I2 261 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 ZNF229Q9UJW7 825 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 PMF1-BGLAPU3KQ54 211 aa8.71□□□□□ -1.02
PHGDH-222ENST00000641587 LIPT2A6NK58 231 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 C11orf98E9PRG8 122 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 M0R082 166 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 MRPL33O75394 65 aaKnown RBP8.7□□□□□ -1.02
PHGDH-222ENST00000641587 SERPINI2O75830 405 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 AKR7A3O95154 331 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 IGFBP1P08833 259 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-222ENST00000641587 IMPDH2P12268 514 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 HNF1AP20823 631 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 IL2RGP31785 369 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 POLR2IP36954 125 aaKnown RBP8.7□□□□□ -1.02
PHGDH-222ENST00000641587 CAPGP40121 348 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 CRISP1P54107 249 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 ESRRGP62508 458 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 CSNK2A1P68400 391 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-222ENST00000641587 SLC35A1P78382 337 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 NPRL3Q12980 569 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 PDK3Q15120 406 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 CLEC12AQ5QGZ9 265 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 RPL13AP3Q6NVV1 102 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 SMARCD3Q6STE5 483 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 CD300LDQ6UXZ3 194 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 IGFN1Q86VF2 1251 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 OR5J2Q8NH18 312 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 OR6S1Q8NH40 331 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 ZNF417Q8TAU3 575 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 SAMD8Q96LT4 415 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 ZNF587Q96SQ5 575 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-222ENST00000641587 VRK1Q99986 396 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-222ENST00000641587 IFT27Q9BW83 186 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 TSSK6Q9BXA6 273 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 GABARAPL3Q9BY60 117 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 PLA2G12AQ9BZM1 189 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 OR52D1Q9H346 318 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 FAM118AQ9NWS6 357 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 REV1Q9UBZ9 1251 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 IL20RAQ9UHF4 553 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 SIGLEC7Q9Y286 467 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 GMPPBQ9Y5P6 360 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 CORINQ9Y5Q5 1042 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 FKBP7Q9Y680 259 aa8.7□□□□□ -1.02
PHGDH-222ENST00000641587 IGHV1-18A0A0C4DH31 117 aa8.69□□□□□ -1.02
PHGDH-222ENST00000641587 DLGAP1O14490 977 aa8.69□□□□□ -1.02
PHGDH-222ENST00000641587 RNF13O43567 381 aa8.69□□□□□ -1.02
PHGDH-222ENST00000641587 NDUFB2O95178 105 aa8.69□□□□□ -1.02
PHGDH-222ENST00000641587 PMS2P2O95744 297 aa8.69□□□□□ -1.02
PHGDH-222ENST00000641587 ADORA3P0DMS8 318 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms