RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	RMND5B	Q96G75	393 aa	Predicted RBP	5.53	□□□□□ -1.52
CASC19-238	ENST00000641523	VSTM2L	Q96N03	204 aa		5.53	□□□□□ -1.52
CASC19-238	ENST00000641523	SFXN2	Q96NB2	322 aa		5.53	□□□□□ -1.52
CASC19-238	ENST00000641523	UGT2B28	Q9BY64	529 aa		5.53	□□□□□ -1.52
CASC19-238	ENST00000641523	FAM192A	Q9GZU8	254 aa		5.53	□□□□□ -1.52
CASC19-238	ENST00000641523	PIGM	Q9H3S5	423 aa		5.53	□□□□□ -1.52
CASC19-238	ENST00000641523	PTGES2	Q9H7Z7	377 aa		5.53	□□□□□ -1.52
CASC19-238	ENST00000641523	DKKL1	Q9UK85	242 aa		5.53	□□□□□ -1.52
CASC19-238	ENST00000641523	ZFHX3	Q15911	3703 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	LOC100653049	A0A140TA62	436 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	TUBAL3	A6NHL2	446 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	EEF1E1-BLOC1S5	C9J1V9	151 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	SLC28A1	O00337	649 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	ANKRD28	O15084	1053 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	EEF1E1	O43324	174 aa	Known RBP	5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	AKAP8	O43823	692 aa	Known RBP	5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	CIDEA	O60543	219 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	RBMXL2	O75526	392 aa	Known RBP	5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	KRT34	O76011	436 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	CRH	P06850	196 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	CT45A8	P0DMV1	189 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	CT45A9	P0DMV2	189 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	CPA3	P15088	417 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	RPL3	P39023	403 aa	Known RBP	5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	NCBP2	P52298	156 aa	Known RBP eCLIP	5.52	□□□□□ -1.53	9e-6	■□□□□ 8.4
CASC19-238	ENST00000641523	DSCR4	P56555	118 aa	Predicted RBP	5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	MRPS34	P82930	218 aa	Known RBP	5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	EGR4	Q05215	589 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	C2orf80	Q0P641	193 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	LTB4R	Q15722	352 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	BCL2A1	Q16548	175 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	DECR1	Q16698	335 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	EIPR1	Q53HC9	387 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	TMEM41B	Q5BJD5	291 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	CT45A2	Q5DJT8	189 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	TCHHL1	Q5QJ38	904 aa	Predicted RBP	5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	DCST1	Q5T197	706 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	AP1AR	Q63HQ0	302 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	OR2A2	Q6IF42	318 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	RNF165	Q6ZSG1	346 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	YRDC	Q86U90	279 aa	Known RBP	5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	CDC26	Q8NHZ8	85 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	OIT3	Q8WWZ8	545 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	EGLN2	Q96KS0	407 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	ZNF583	Q96ND8	569 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	MS4A10	Q96PG2	267 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	NODAL	Q96S42	347 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	PRSS22	Q9GZN4	317 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	ROPN1	Q9HAT0	212 aa	Predicted RBP	5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	FOLH1B	Q9HBA9	442 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	EML4	Q9HC35	981 aa	Known RBP	5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	MGAT4B	Q9UQ53	548 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	SLC6A5	Q9Y345	797 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	MED13L	Q71F56	2210 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	MED12	Q93074	2177 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	TLN2	Q9Y4G6	2542 aa		5.52	□□□□□ -1.53
CASC19-238	ENST00000641523	ROS1	P08922	2347 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	EML6	Q6ZMW3	1958 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	NF1	P21359	2839 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523		A0A1W2PN81	502 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	ANKRD61	A6NGH8	418 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	AZIN1	O14977	448 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	TSPAN2	O60636	221 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	PLIN3	O60664	434 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	SOX30	O94993	753 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	RCBTB2	O95199	551 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	IFNA2	P01563	188 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	ZNF708	P17019	499 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	DPP4	P27487	766 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	LCN1	P31025	176 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	EVI2B	P34910	448 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	CHRNA7	P36544	502 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	NUP62	P37198	522 aa	Predicted RBP	5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	PCYT1A	P49585	367 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	ZNF136	P52737	540 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	DLX5	P56178	289 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	ATP5I	P56385	69 aa	Predicted RBP	5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	KRTAP10-9	P60411	292 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	GLYR1	Q49A26	553 aa	Predicted RBP	5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	FAM71E1	Q6IPT2	247 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	P4HA3	Q7Z4N8	544 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	OR2L13	Q8N349	312 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	SLC43A2	Q8N370	569 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	WDSUB1	Q8N9V3	476 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	MINDY2	Q8NBR6	621 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	RELL2	Q8NC24	303 aa	Predicted RBP	5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	OR52J3	Q8NH60	311 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	RNF138	Q8WVD3	245 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	RASD2	Q96D21	266 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	ZBED6CL	Q96FA7	236 aa	Predicted RBP	5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	DDO	Q99489	341 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	FOXC2	Q99958	501 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	EBPL	Q9BY08	206 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	SIRPD	Q9H106	197 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	LRTM1	Q9HBL6	345 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	ZCCHC3	Q9NUD5	404 aa	Known RBP	5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	C1orf109	Q9NX04	203 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	FAM120C	Q9NX05	1096 aa	Known RBP	5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	TIMM22	Q9Y584	194 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	COX11	Q9Y6N1	276 aa		5.51	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms