RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 RHCGQ9UBD6 479 aa11.91□□□□□ -0.5
LINC00339-211ENST00000641009 SNX13Q9Y5W8 968 aa11.91□□□□□ -0.5
LINC00339-211ENST00000641009 CAPN7Q9Y6W3 813 aa11.91□□□□□ -0.5
LINC00339-211ENST00000641009 IGLV3-9A0A075B6K5 115 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 ELOVL7A1L3X0 281 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 ARHGAP32A7KAX9 2087 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 WNT9BO14905 357 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 PTHP01270 115 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 IFI30P13284 250 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 CCNOP22674 350 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 SELENOVP59797 346 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 GUCY1A3Q02108 690 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 HSF2Q03933 536 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 PLP2Q04941 152 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 ST3GAL3Q11203 375 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 ALG10Q5BKT4 473 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 PABPC1L2AQ5JQF8 200 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 VTCN1Q7Z7D3 282 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 IGFN1Q86VF2 1251 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 CLDN22Q8N7P3 220 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 OR1J2Q8NGS2 313 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 CLDND2Q8NHS1 167 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 ZNF519Q8TB69 540 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 BPIFA2Q96DR5 249 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 TXNIPQ9H3M7 391 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 SIAEQ9HAT2 523 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 ZNF446Q9NWS9 450 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 CMTM6Q9NX76 183 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 TMEFF2Q9UIK5 374 aaPredicted RBP11.9□□□□□ -0.5
LINC00339-211ENST00000641009 ZNF346Q9UL40 294 aaKnown RBP11.9□□□□□ -0.5
LINC00339-211ENST00000641009 HIF3AQ9Y2N7 669 aa11.9□□□□□ -0.5
LINC00339-211ENST00000641009 TRAV27A0A087WT01 109 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 NPIPB13A6NJU9 1138 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 C17orf100A8MU93 164 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 NPIPB4C9JG80 1138 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 J3KTA2 159 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 PPIHO43447 177 aaKnown RBP11.89□□□□□ -0.51
LINC00339-211ENST00000641009 MGRN1O60291 552 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 RP2O75695 350 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 SAGP10523 405 aaPredicted RBP11.89□□□□□ -0.51
LINC00339-211ENST00000641009 ZNF32P17041 273 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 MAKP20794 623 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 STOMP27105 288 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 APLNRP35414 380 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 RAD52P43351 418 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 CCL8P80075 99 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 MRPS34P82930 218 aaKnown RBP11.89□□□□□ -0.51
LINC00339-211ENST00000641009 SGCAQ16586 387 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 RINLQ6ZS11 566 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 OR1J1Q8NGS3 322 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 AKR7LQ8NHP1 331 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 C11orf40Q8WZ69 217 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 GTF3AQ92664 365 aaKnown RBP11.89□□□□□ -0.51
LINC00339-211ENST00000641009 C19orf24Q9BVV8 132 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 BCL2L14Q9BZR8 327 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 LRMDAQ9H2I8 198 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 KCNN2Q9H2S1 579 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 SMURF2Q9HAU4 748 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 LPAR2Q9HBW0 351 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 CCNB1IP1Q9NPC3 277 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 HINT3Q9NQE9 182 aaKnown RBP11.89□□□□□ -0.51
LINC00339-211ENST00000641009 MAN2C1Q9NTJ4 1040 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 STX18Q9P2W9 335 aaKnown RBP11.89□□□□□ -0.51
LINC00339-211ENST00000641009 GPR160Q9UJ42 338 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 TENM1Q9UKZ4 2725 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 B4DSR2 109 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 FAM157AC9JC47 383 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 CDC14BO60729 498 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 SRP14P37108 136 aaKnown RBP11.89□□□□□ -0.51
LINC00339-211ENST00000641009 DVL1P1P54792 670 aaPredicted RBP11.89□□□□□ -0.51
LINC00339-211ENST00000641009 CTXN1P60606 82 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 RPL27P61353 136 aaKnown RBP11.89□□□□□ -0.51
LINC00339-211ENST00000641009 ERVK-25P63136 954 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 MRPS11P82912 194 aaKnown RBP11.89□□□□□ -0.51
LINC00339-211ENST00000641009 GLO1Q04760 184 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 TMEM154Q6P9G4 183 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 SLC25A47Q6Q0C1 308 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 UGT2A3Q6UWM9 527 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 NRMQ8IXM6 262 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 SLC15A3Q8IY34 581 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 OFCC1Q8IZS5 231 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 OR51A7Q8NH64 312 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 SNX33Q8WV41 574 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 LZICQ8WZA0 190 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 RACGAP1Q9H0H5 632 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 SLCO1C1Q9NYB5 712 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 TREM2Q9NZC2 230 aa11.89□□□□□ -0.51
LINC00339-211ENST00000641009 DYSFO75923 2080 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 LOC100509620A0A075B734 347 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 C5orf49A4QMS7 147 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 FFAR1O14842 300 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 SLC22A2O15244 555 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 ZNF682O95780 498 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 IGHMP01871 453 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 IFNW1P05000 195 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 IFNA8P32881 189 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 WNT5AP41221 380 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 TMEM33P57088 247 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 PSG4Q00888 419 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 LIPEQ05469 1076 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms