RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 NSMAFQ92636 917 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 CCNB1IP1Q9NPC3 277 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 TMEM160Q9NX00 188 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 DUSP13Q9UII6 198 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 UGT2A1Q9Y4X1 527 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 ENPP4Q9Y6X5 453 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 IGHV4-61A0A0C4DH41 118 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 A6NIZ1 184 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 SNAP29O95721 258 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 MMP7P09237 267 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-230ENST00000640482 CCL2P13500 99 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 CDAP32320 146 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 APLNRP35414 380 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 SELENOVP59797 346 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 RAP1BP61224 184 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 RAP1AP62834 184 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 SGCAQ16586 387 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 SLC25A47Q6Q0C1 308 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 IGFN1Q86VF2 1251 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 LRP11Q86VZ4 500 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 MEX3DQ86XN8 651 aaKnown RBP21.67■■□□□ 1.06
VEGFA-230ENST00000640482 LRRC75AQ8NAA5 344 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 OR13C2Q8NGS9 318 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 NDEL1Q9GZM8 345 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 NMNAT1Q9HAN9 279 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-230ENST00000640482 ADA2Q9NZK5 511 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 EGFL7Q9UHF1 273 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 CDC42EP3Q9UKI2 254 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 FZR1Q9UM11 496 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 TMEM5Q9Y2B1 443 aa21.67■■□□□ 1.06
VEGFA-230ENST00000640482 IGKV1D-43A0A0B4J1Z2 117 aa21.66■■□□□ 1.06
VEGFA-230ENST00000640482 A0A1W2PPW3 197 aa21.66■■□□□ 1.06
VEGFA-230ENST00000640482 IFNA2P01563 188 aa21.66■■□□□ 1.06
VEGFA-230ENST00000640482 FAM157BP0CG42 384 aa21.66■■□□□ 1.06
VEGFA-230ENST00000640482 ZNF23P17027 643 aa21.66■■□□□ 1.06
VEGFA-230ENST00000640482 DRD4P21917 467 aa21.66■■□□□ 1.06
VEGFA-230ENST00000640482 GUCA1AP43080 201 aaPredicted RBP21.66■■□□□ 1.06
VEGFA-230ENST00000640482 RAD52P43351 418 aa21.66■■□□□ 1.06
VEGFA-230ENST00000640482 ALDH3B1P43353 468 aa21.66■■□□□ 1.06
VEGFA-230ENST00000640482 GLYATQ6IB77 296 aa21.66■■□□□ 1.06
VEGFA-230ENST00000640482 PAQR4Q8N4S7 273 aaPredicted RBP21.66■■□□□ 1.06
VEGFA-230ENST00000640482 ZNF519Q8TB69 540 aa21.66■■□□□ 1.06
VEGFA-230ENST00000640482 NABP1Q96AH0 204 aa21.66■■□□□ 1.06
VEGFA-230ENST00000640482 TSPAN32Q96QS1 320 aa21.66■■□□□ 1.06
VEGFA-230ENST00000640482 SAMD4AQ9UPU9 718 aaKnown RBP21.66■■□□□ 1.06
VEGFA-230ENST00000640482 FAM32AQ9Y421 112 aaKnown RBP21.66■■□□□ 1.06
VEGFA-230ENST00000640482 GPR4P46093 362 aa21.65■■□□□ 1.06
VEGFA-230ENST00000640482 PABPC1L2AQ5JQF8 200 aa21.65■■□□□ 1.06
VEGFA-230ENST00000640482 TBPL2Q6SJ96 375 aa21.65■■□□□ 1.06
VEGFA-230ENST00000640482 TMPRSS11FQ6ZWK6 438 aa21.65■■□□□ 1.06
VEGFA-230ENST00000640482 BCL2L14Q9BZR8 327 aa21.65■■□□□ 1.06
VEGFA-230ENST00000640482 MYEF2Q9P2K5 600 aaKnown RBP21.65■■□□□ 1.06
VEGFA-230ENST00000640482 LPAR3Q9UBY5 353 aa21.65■■□□□ 1.06
VEGFA-230ENST00000640482 GPR160Q9UJ42 338 aa21.65■■□□□ 1.06
VEGFA-230ENST00000640482 LCKP06239 509 aa21.64■■□□□ 1.05
VEGFA-230ENST00000640482 H1F0P07305 194 aaKnown RBP21.64■■□□□ 1.05
VEGFA-230ENST00000640482 APEX1P27695 318 aaKnown RBP21.64■■□□□ 1.05
VEGFA-230ENST00000640482 RPL4P36578 427 aaKnown RBP21.64■■□□□ 1.05
VEGFA-230ENST00000640482 UCP2P55851 309 aa21.64■■□□□ 1.05
VEGFA-230ENST00000640482 FHL1Q13642 323 aa21.64■■□□□ 1.05
VEGFA-230ENST00000640482 MAD2L1BPQ15013 274 aaPredicted RBP21.64■■□□□ 1.05
VEGFA-230ENST00000640482 ZBED5Q49AG3 693 aa21.64■■□□□ 1.05
VEGFA-230ENST00000640482 FAM27BQ5VT28 67 aa21.64■■□□□ 1.05
VEGFA-230ENST00000640482 FAM166AQ6J272 317 aa21.64■■□□□ 1.05
VEGFA-230ENST00000640482 FAM156AQ8NDB6 213 aa21.64■■□□□ 1.05
VEGFA-230ENST00000640482 C11orf40Q8WZ69 217 aa21.64■■□□□ 1.05
VEGFA-230ENST00000640482 OR51B6Q9H340 312 aa21.64■■□□□ 1.05
VEGFA-230ENST00000640482 DCAF13Q9NV06 445 aaKnown RBP21.64■■□□□ 1.05
VEGFA-230ENST00000640482 KCNS2Q9ULS6 477 aa21.64■■□□□ 1.05
VEGFA-230ENST00000640482 LOC100289279A0A1B0GTE1 492 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 A0A1W2PRQ8 180 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 CDC42EP2O14613 210 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 LMX1BO60663 402 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 ZNF250P15622 560 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 ZNF32P17041 273 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 RHCEP18577 417 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 TCN1P20061 433 aaPredicted RBP21.63■■□□□ 1.05
VEGFA-230ENST00000640482 CHN2P52757 468 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 KLF3P57682 345 aaPredicted RBP21.63■■□□□ 1.05
VEGFA-230ENST00000640482 DGCR6Q14129 220 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 NKPD1Q17RQ9 610 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 PODNL1Q6PEZ8 512 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 TSEN54Q7Z6J9 526 aaKnown RBP21.63■■□□□ 1.05
VEGFA-230ENST00000640482 CLDN22Q8N7P3 220 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 ARIH2OSQ8N7S6 290 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 SYNPRQ8TBG9 265 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 SLC7A13Q8TCU3 470 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 NDUFAF4Q9P032 175 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 GRHPRQ9UBQ7 328 aa21.63■■□□□ 1.05
VEGFA-230ENST00000640482 CD14P08571 375 aa21.62■■□□□ 1.05
VEGFA-230ENST00000640482 TACSTD2P09758 323 aa21.62■■□□□ 1.05
VEGFA-230ENST00000640482 CCNOP22674 350 aa21.62■■□□□ 1.05
VEGFA-230ENST00000640482 STOMP27105 288 aa21.62■■□□□ 1.05
VEGFA-230ENST00000640482 PCBD1P61457 104 aa21.62■■□□□ 1.05
VEGFA-230ENST00000640482 ERVK-25P63136 954 aa21.62■■□□□ 1.05
VEGFA-230ENST00000640482 RIN1Q13671 783 aa21.62■■□□□ 1.05
VEGFA-230ENST00000640482 FGD3Q5JSP0 725 aa21.62■■□□□ 1.05
VEGFA-230ENST00000640482 RNF148Q8N7C7 305 aa21.62■■□□□ 1.05
VEGFA-230ENST00000640482 CPEB3Q8NE35 698 aaKnown RBP21.62■■□□□ 1.05
VEGFA-230ENST00000640482 MSI2Q96DH6 328 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms