RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 GNB3P16520 340 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 PIGAP37287 484 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 LIM2P55344 173 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF789Q5FWF6 425 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 PLAG1Q6DJT9 500 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 CLDN22Q8N7P3 220 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 TMEM239Q8WW34 195 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 VN1R1Q9GZP7 353 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 SIAEQ9HAT2 523 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 KMT2EQ8IZD2 1858 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 OR7C1O76099 320 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 FURINP09958 794 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 SUB1P53999 127 aaKnown RBP eCLIP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 PAFAH1B2P68402 229 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 TCTN1Q2MV58 587 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 DPY19L2P1Q6NXN4 242 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 THSD4Q6ZMP0 1018 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 SPRED2Q7Z698 418 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 TMEM135Q86UB9 458 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 PHTF2Q8N3S3 785 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 RPEQ96AT9 228 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 PYURFQ96I23 114 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 CITED4Q96RK1 184 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 SLCO5A1Q9H2Y9 848 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 ENPP5Q9UJA9 477 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 SSUH2Q9Y2M2 353 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 PPIL1Q9Y3C6 166 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 LIPGQ9Y5X9 500 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 GPR4P46093 362 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 GSG1Q2KHT4 349 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 SMIM21Q3B7S5 101 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 GLYR1Q49A26 553 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 VASNQ6EMK4 673 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 MOB3BQ86TA1 216 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 ROBO4Q8WZ75 1007 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 EMG1Q92979 244 aaKnown RBP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 PTDSS2Q9BVG9 487 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 CISD1Q9NZ45 108 aaKnown RBP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 PCTPQ9UKL6 214 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 DNASE2O00115 360 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 BHLHE40O14503 412 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 LYZL6O75951 148 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 PRR35P0CG20 571 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 RPS4XP62701 263 aaKnown RBP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 ADARB1P78563 741 aaKnown RBP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 NAAAQ02083 359 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 CAMK2BQ13554 666 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 TPBGQ13641 420 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 MEDAGQ5VYS4 303 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 TIGD3Q6B0B8 471 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 ZBTB44Q8NCP5 570 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 NPRL2Q8WTW4 380 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 FAM168AQ92567 244 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 ISL2Q96A47 359 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 MS4A8Q9BY19 250 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 SLAMF8Q9P0V8 285 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 MED16Q9Y2X0 877 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 HRH3Q9Y5N1 445 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 A0A0U1RQS6 177 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 TCRBV7S2A1N4TA0A589 114 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF195O14628 629 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 DVL1O14640 695 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 FOXH1O75593 365 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 EML2O95834 649 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 SERPINE2P07093 398 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 BMP6P22004 513 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 DVL1P1P54792 670 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 MTCP1P56278 107 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 INSM1Q01101 510 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 AGERQ15109 404 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 MSMO1Q15800 293 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 UGT8Q16880 541 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 FAM209AQ5JX71 171 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 MRPL2Q5T653 305 aaKnown RBP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 HMGN2P46Q86SG4 172 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF573Q86YE8 665 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 GABRG1Q8N1C3 465 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 ST8SIA2Q92186 375 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 TAAR8Q969N4 342 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 CCDC120Q96HB5 630 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 LINC00615Q96LM1 132 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF75AQ96N20 296 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 LYSMD1Q96S90 227 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 PCDHAC1Q9H158 963 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 RIMS4Q9H426 269 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-218ENST00000640036 CLN8Q9UBY8 286 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 ABCA2Q9BZC7 2435 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 MGAMO43451 1857 aa4.58□□□□□ -1.68
SCN1A-218ENST00000640036 TRBV2A0A0J9YWF9 115 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF785A8K8V0 405 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 SH2D1BO14796 132 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ST8SIA5O15466 376 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CIDEAO60543 219 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 KCNK2O95069 426 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 MAKP20794 623 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 G0S2P27469 103 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CSRP3P50461 194 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 RAB9AP51151 201 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CDKN2DP55273 166 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 UFM1P61960 85 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms