RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 XKRYO14609 159 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 GPANK1O95872 356 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 CTSEP14091 401 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 UBXN2BQ14CS0 331 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 MEP1BQ16820 701 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 C4orf46Q504U0 113 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 C11orf88Q6PI97 169 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 TMEM92Q6UXU6 159 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 PARGQ86W56 976 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 MS4A7Q9GZW8 240 aaPredicted RBP18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 LAT2Q9GZY6 243 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 WDPCPO95876 746 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 ITGB2P05107 769 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 SLC37A1P57057 533 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 TEX30Q5JUR7 227 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 PDZD9Q8IXQ8 264 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 ZNF679Q8IYX0 411 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 OR6K3Q8NGY3 331 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 RNF128Q8TEB7 428 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 GAS2L1Q99501 681 aaPredicted RBP18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 ELF4Q99607 663 aaPredicted RBP18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 NXF5Q9H1B4 397 aaKnown RBP18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 CACNA1IQ9P0X4 2223 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 SPTY2D1-AS1A0A0U1RR47 76 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 PMS2P2O95744 297 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 BGLAPP02818 100 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 PROS1P07225 676 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 TAS2R19P59542 299 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 CDH26Q8IXH8 852 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 GABRG1Q8N1C3 465 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 OR5M9Q8NGP3 310 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 OR1S1Q8NH92 325 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 SLC46A1Q96NT5 459 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 POTEKPQ9BYX7 375 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 ATG5Q9H1Y0 275 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 EPHA6Q9UF33 1036 aa18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 MRTO4Q9UKD2 239 aaKnown RBP18.16■□□□□ 0.5
SYNGAP1-227ENST00000638142 MEIS3P1A6NDR6 274 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 H3BUI4 141 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 LGALS8O00214 317 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 C1orf61Q13536 156 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 KCNAB1Q14722 419 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 ARHGAP40Q5TG30 622 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 ZNF660Q6AZW8 331 aaPredicted RBP18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 SLC18B1Q6NT16 456 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 CFAP77Q6ZQR2 320 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 ATOH1Q92858 354 aaPredicted RBP18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 ZNF285Q96NJ3 590 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 HLA-DQA2P01906 255 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 FBXO45P0C2W1 286 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 DRD1P21728 446 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 CENPAP49450 140 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 METTL27Q8N6F8 245 aaPredicted RBP18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 OR8S1Q8NH09 359 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 MAP3K3Q99759 626 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 MFFQ9GZY8 342 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 KCNK15Q9H427 330 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 B9D1Q9UPM9 204 aa18.15■□□□□ 0.5
SYNGAP1-227ENST00000638142 TRAV36DV7A0A075B6V5 113 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 TCRBV21S2A2A0A5A6 115 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 RFPL4AA6NLU0 287 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 B4DGG1 531 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 C10orf142B7Z368 130 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 RFPL4AL1F8VTS6 287 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 ICAM2P13598 275 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 CXCR1P25024 350 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 MAZP56270 477 aaKnown RBP18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 ROM1Q03395 351 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 FZD2Q14332 565 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 GLT8D1Q68CQ7 371 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 SLC35D2Q76EJ3 337 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 STPG2Q8N412 459 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 FRMD1Q8N878 549 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 TMEM229BQ8NBD8 167 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 OR1J4Q8NGS1 313 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 PTPMT1Q8WUK0 201 aaPredicted RBP18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 METTL21AQ8WXB1 218 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 DVL3Q92997 716 aaPredicted RBP18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 KLHDC3Q9BQ90 382 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 SLC25A21Q9BQT8 299 aaPredicted RBP18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 TMEM106CQ9BVX2 250 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 CHST6Q9GZX3 395 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 S1PR5Q9H228 398 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 POFUT1Q9H488 388 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 SCPEP1Q9HB40 452 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 CKLFQ9UBR5 152 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 DHDHQ9UQ10 334 aa18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 TMEM184BQ9Y519 407 aaPredicted RBP18.14■□□□□ 0.5
SYNGAP1-227ENST00000638142 DNAH14Q0VDD8 3507 aa18.14■□□□□ 0.49
SYNGAP1-227ENST00000638142 TCRBV16S1A1N1A0A5B0 115 aa18.14■□□□□ 0.49
SYNGAP1-227ENST00000638142 FRG2CA6NGY1 282 aa18.14■□□□□ 0.49
SYNGAP1-227ENST00000638142 D6RAR5 112 aa18.14■□□□□ 0.49
SYNGAP1-227ENST00000638142 IGHV4-34P06331 123 aa18.14■□□□□ 0.49
SYNGAP1-227ENST00000638142 MPGP29372 298 aa18.14■□□□□ 0.49
SYNGAP1-227ENST00000638142 SORDQ00796 357 aa18.14■□□□□ 0.49
SYNGAP1-227ENST00000638142 TMEM225Q6GV28 225 aa18.14■□□□□ 0.49
SYNGAP1-227ENST00000638142 ASPHD2Q6ICH7 369 aa18.14■□□□□ 0.49
SYNGAP1-227ENST00000638142 EDAQ92838 391 aa18.14■□□□□ 0.49
SYNGAP1-227ENST00000638142 FBXW5Q969U6 566 aa18.14■□□□□ 0.49
SYNGAP1-227ENST00000638142 DMRTA2Q96SC8 542 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms