RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 SKA3Q8IX90 412 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 LRRC18Q8N456 261 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 ATG16L2Q8NAA4 619 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 OR2T33Q8NG76 320 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 OR5K1Q8NHB7 308 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 TEX47Q8TBZ9 253 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 SMAP2Q8WU79 429 aaPredicted RBP7.17□□□□□ -1.26
PNKP-226ENST00000636840 TRMT61AQ96FX7 289 aaKnown RBP7.17□□□□□ -1.26
PNKP-226ENST00000636840 DUS3LQ96G46 650 aaKnown RBP7.17□□□□□ -1.26
PNKP-226ENST00000636840 HS3ST6Q96QI5 342 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 SNX18Q96RF0 628 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 CCL19Q99731 98 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 GPA33Q99795 319 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 SH3GL3Q99963 347 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 DHRS9Q9BPW9 319 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 TSSK6Q9BXA6 273 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 NELFAQ9H3P2 528 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 CXorf56Q9H5V9 222 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 SRA1Q9HD15 236 aaKnown RBP7.17□□□□□ -1.26
PNKP-226ENST00000636840 BEX4Q9NWD9 120 aaPredicted RBP7.17□□□□□ -1.26
PNKP-226ENST00000636840 B3GNT2Q9NY97 397 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 NPAP1Q9NZP6 1156 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 VSX1Q9NZR4 365 aaPredicted RBP7.17□□□□□ -1.26
PNKP-226ENST00000636840 CRNNQ9UBG3 495 aaPredicted RBP7.17□□□□□ -1.26
PNKP-226ENST00000636840 ENOPH1Q9UHY7 261 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 KLHL21Q9UJP4 597 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 FBXO9Q9UK97 447 aaPredicted RBP7.17□□□□□ -1.26
PNKP-226ENST00000636840 TIMM10BQ9Y5J6 103 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 PMF1-BGLAPU3KQ54 211 aa7.17□□□□□ -1.26
PNKP-226ENST00000636840 IGHV1-18A0A0C4DH31 117 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 G3V2T6 193 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 SMPD2O60906 423 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 PLAUP00749 431 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 IGKV3-15P01624 115 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 HMGN1P05114 100 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 CST2P09228 141 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 MSR1P21757 451 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 PAICSP22234 425 aaKnown RBP7.16□□□□□ -1.26
PNKP-226ENST00000636840 POU1F1P28069 291 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 LOXP28300 417 aaPredicted RBP7.16□□□□□ -1.26
PNKP-226ENST00000636840 CDAP32320 146 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 APLNRP35414 380 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 CDKN2AP42771 156 aaKnown RBP7.16□□□□□ -1.26
PNKP-226ENST00000636840 GIPRP48546 466 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 IST1P53990 364 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 SELENOVP59797 346 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 TUBA1BP68363 451 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 TUBA4AP68366 448 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 NAAAQ02083 359 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 FMODQ06828 376 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 ATP6AP1Q15904 470 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 CLEC12AQ5QGZ9 265 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 ZNF770Q6IQ21 691 aaPredicted RBP7.16□□□□□ -1.26
PNKP-226ENST00000636840 ZNF544Q6NX49 715 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 LEG1Q6P5S2 330 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 SHQ1Q6PI26 577 aaKnown RBP7.16□□□□□ -1.26
PNKP-226ENST00000636840 ARL9Q6T311 187 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 THSD4Q6ZMP0 1018 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 TUBA1AQ71U36 451 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 SYT9Q86SS6 491 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 GLB1L2Q8IW92 636 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 SVOPLQ8N434 492 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 OR10H5Q8NGA6 315 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 OR52E2Q8NGJ4 325 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 OR4K13Q8NH42 304 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 RASD2Q96D21 266 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 MBD6Q96DN6 1003 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 CENPNQ96H22 339 aaPredicted RBP7.16□□□□□ -1.26
PNKP-226ENST00000636840 PLEKHA8Q96JA3 519 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 CDADC1Q9BWV3 514 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 SYT4Q9H2B2 425 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 LIME1Q9H400 295 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 CDH20Q9HBT6 801 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 EIF3KQ9UBQ5 218 aaKnown RBP7.16□□□□□ -1.26
PNKP-226ENST00000636840 MOKQ9UQ07 419 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 LAMP3Q9UQV4 416 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 PLEKHA6Q9Y2H5 1048 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 POLR1DQ9Y2S0 133 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 FKBP7Q9Y680 259 aa7.16□□□□□ -1.26
PNKP-226ENST00000636840 ANKRD17O75179 2603 aaKnown RBP7.16□□□□□ -1.26
PNKP-226ENST00000636840 POLQO75417 2590 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 DSCAMO60469 2012 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 CCDC168Q8NDH2 2452 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 RIIAD1A6NNX1 92 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 SHISA9B4DS77 424 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 H7C1C5 153 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 IGLV1-44P01699 117 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 HLA-DQA2P01906 255 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 CECR9P0C854 216 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 OSMP13725 252 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 HIST1H1CP16403 213 aaKnown RBP7.15□□□□□ -1.26
PNKP-226ENST00000636840 ZNF23P17027 643 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 ZNF26P17031 533 aaPredicted RBP7.15□□□□□ -1.26
PNKP-226ENST00000636840 CD53P19397 219 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 PRKACGP22612 351 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 RAD52P43351 418 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 ART1P52961 327 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 BLVRAP53004 296 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 FXYD6P3P58550 94 aa7.15□□□□□ -1.26
PNKP-226ENST00000636840 ACTR3P61158 418 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms