RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	HOXA6	P31267	233 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	WNT3	P56703	355 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	POU4F3	Q15319	338 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	LIPN	Q5VXI9	398 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SLC25A45	Q8N413	288 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MAN2C1	Q9NTJ4	1040 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PCDHB10	Q9UN67	800 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	LOC102725191	A0A1B0GVB3	256 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	HRG	P04196	525 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MKX	Q8IYA7	352 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DCLRE1C	Q96SD1	692 aa	Known RBP	13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	NOX4	Q9NPH5	578 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997		K7ESF4	209 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	NKX2-8	O15522	239 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	LYRM1	O43325	122 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	GREM1	O60565	184 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DNASE1	P24855	282 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RPL18	Q07020	188 aa	Known RBP	13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	CTU2	Q2VPK5	515 aa	Known RBP	13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TRIL	Q7L0X0	811 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PLPP7	Q8NBV4	271 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	WDR76	Q9H967	626 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	EIF1B	O60739	113 aa	Known RBP	13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	THBS1	P07996	1170 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PVALB	P20472	110 aa	Predicted RBP	13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	BTN1A1	Q13410	526 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZNF767P	Q75MW2	155 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PIGT	Q969N2	578 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MAP6	Q96JE9	813 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	NTN4	Q9HB63	628 aa		13.03	□□□□□ -0.32
NEDD4L-238	ENST00000635997	IGHV5-10-1	A0A0J9YXX1	117 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997		A0A1W2PQ09	198 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	GUSB	P08236	651 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PRR35	P0CG20	571 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ANXA3	P12429	323 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	LCN1	P31025	176 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RAB2A	P61019	212 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	AQP6	Q13520	282 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PYHIN1	Q6K0P9	492 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RPL22L1	Q6P5R6	122 aa	Known RBP	13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZNF620	Q6ZNG0	422 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TMPRSS7	Q7RTY8	843 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	CAMKMT	Q7Z624	323 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TMEM99	Q8N816	258 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	FGGY	Q96C11	551 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SPACA5	Q96QH8	159 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	LANCL2	Q9NS86	450 aa		13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZNF223	Q9UK11	482 aa	Predicted RBP	13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZNF346	Q9UL40	294 aa	Known RBP	13.02	□□□□□ -0.32
NEDD4L-238	ENST00000635997	HOXC4	P09017	264 aa	Predicted RBP	13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	SBK2	P0C263	348 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	CALCB	P10092	127 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	GABRA2	P47869	451 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	P2RX3	P56373	397 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	ZNF766	Q5HY98	468 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	FHL5	Q5TD97	284 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	COMMD7	Q86VX2	200 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	ABHD4	Q8TB40	342 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	FYTTD1	Q96QD9	318 aa	Known RBP	13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	KCNIP1	Q9NZI2	227 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	MBD2	Q9UBB5	411 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	SLC5A6	Q9Y289	635 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	MED13L	Q71F56	2210 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997		A0A1B0GV50	99 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	GPR171	O14626	319 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	PEX14	O75381	377 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	WNT1	P04628	370 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	S100A6	P06703	90 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	FCGR2A	P12318	317 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	HTR1F	P30939	366 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	TGFBR1	P36897	503 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	FCRL6	Q6DN72	434 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	KIF18B	Q86Y91	864 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	MUL1	Q969V5	352 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	THAP7	Q9BT49	309 aa	Predicted RBP	13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	WWTR1	Q9GZV5	400 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	POLE3	Q9NRF9	147 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997		F5H0A9	414 aa	Predicted RBP	13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	CT62	P0C5K7	136 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	APEX1	P27695	318 aa	Known RBP	13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	PCBD1	P61457	104 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	HSF1	Q00613	529 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	FAM122C	Q6P4D5	195 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	OR51D1	Q8NGF3	324 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	ZC3H10	Q96K80	434 aa	Known RBP	13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	AIFM2	Q9BRQ8	373 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	CRLF2	Q9HC73	371 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	MEPE	Q9NQ76	525 aa	Predicted RBP	13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	TXNL4B	Q9NX01	149 aa	Known RBP	13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	TCFL5	Q9UL49	500 aa		13.02	□□□□□ -0.33
NEDD4L-238	ENST00000635997	KCNE1B	A0A087WTH5	132 aa		13.01	□□□□□ -0.33
NEDD4L-238	ENST00000635997	CREBL2	O60519	120 aa	Predicted RBP	13.01	□□□□□ -0.33
NEDD4L-238	ENST00000635997	CBX7	O95931	251 aa		13.01	□□□□□ -0.33
NEDD4L-238	ENST00000635997	QDPR	P09417	244 aa		13.01	□□□□□ -0.33
NEDD4L-238	ENST00000635997	ACTB	P60709	375 aa		13.01	□□□□□ -0.33
NEDD4L-238	ENST00000635997	ACTG1	P63261	375 aa		13.01	□□□□□ -0.33
NEDD4L-238	ENST00000635997	DBP	Q10586	325 aa	Predicted RBP	13.01	□□□□□ -0.33
NEDD4L-238	ENST00000635997	FAP	Q12884	760 aa		13.01	□□□□□ -0.33
NEDD4L-238	ENST00000635997	CAMK2B	Q13554	666 aa		13.01	□□□□□ -0.33
NEDD4L-238	ENST00000635997	SLC36A2	Q495M3	483 aa		13.01	□□□□□ -0.33

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