RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 CDH11P55287 796 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 RAB1AP62820 205 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 NAAAQ02083 359 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 SPOCK1Q08629 439 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 NPRL3Q12980 569 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 CLEC12AQ5QGZ9 265 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 FAM27BQ5VT28 67 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 DNM1P34Q6PK57 102 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 PTCHD4Q6ZW05 846 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 SLC16A14Q7RTX9 510 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 C10orf67Q8IYJ2 551 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 LNX2Q8N448 690 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 OR2T33Q8NG76 320 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 DNAJC9Q8WXX5 260 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 NABP1Q96AH0 204 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 MBD6Q96DN6 1003 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 ZNF75AQ96N20 296 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 SH3GL3Q99963 347 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 PLA2G12AQ9BZM1 189 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 SYT4Q9H2B2 425 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 KCNN2Q9H2S1 579 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 POU2F3Q9UKI9 436 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 SLC16A7O60669 478 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 SOX14O95416 240 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 RENP00797 406 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 TP53P04637 393 aaPredicted RBP12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 HIST1H1CP16403 213 aaKnown RBP12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 CTLA4P16410 223 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 ZNF14P17017 642 aaPredicted RBP12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 CD53P19397 219 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 MSR1P21757 451 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 PTDSS1P48651 473 aaKnown RBP12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 PIGFQ07326 219 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 KPNB1Q14974 876 aaKnown RBP12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 ZFP1Q6P2D0 407 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 TMEM53Q6P2H8 277 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 HS3ST5Q8IZT8 346 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 OR8D4Q8NGM9 314 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 OR5K1Q8NHB7 308 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 TEX47Q8TBZ9 253 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 PIGTQ969N2 578 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 WACQ9BTA9 647 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 SEC61A2Q9H9S3 476 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 NOX3Q9HBY0 568 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 FAIMQ9NVQ4 179 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 CISD1Q9NZ45 108 aaKnown RBP12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 MOKQ9UQ07 419 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 PLEKHA6Q9Y2H5 1048 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 NOTCH2Q04721 2471 aa12.82□□□□□ -0.36
CDC42BPB-209ENST00000634889 MAST4O15021 2626 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 A0A1W2PPL8 197 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 ATP6V1G2-DDX39BF2Z307 99 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 KHDRBS3O75525 346 aaKnown RBP12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 PTHP01270 115 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 SERPINA5P05154 406 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 CELA3BP08861 270 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 CST2P09228 141 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 GIPRP48546 466 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 ETFDHQ16134 617 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 SGCAQ16586 387 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 LEG1Q6P5S2 330 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 MYPOPQ86VE0 399 aaPredicted RBP12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 HIPK1Q86Z02 1210 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 GLB1L2Q8IW92 636 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 LRRC18Q8N456 261 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 ATG16L2Q8NAA4 619 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 OR52E2Q8NGJ4 325 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 OR4K13Q8NH42 304 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 FGFBP3Q8TAT2 258 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 HTRA1Q92743 480 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 NEUROG1Q92886 237 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 NMNAT3Q96T66 252 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 CCL19Q99731 98 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 TSSK6Q9BXA6 273 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 NUAK2Q9H093 628 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 C1orf198Q9H425 327 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 RNF121Q9H920 327 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 CCNB1IP1Q9NPC3 277 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 POLE4Q9NR33 117 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 KIF17Q9P2E2 1029 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 REV1Q9UBZ9 1251 aa12.81□□□□□ -0.36
CDC42BPB-209ENST00000634889 POLQO75417 2590 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 C12orf71A8MTZ7 269 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 G3V2T6 193 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 H3BN98 237 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 MMP7P09237 267 aaPredicted RBP12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 DANCRP0C864 163 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 PATE4P0C8F1 98 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 OSMP13725 252 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 PRKACGP22612 351 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 LAP3P28838 519 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 PCBD1P61457 104 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 GABPB1Q06547 395 aaPredicted RBP12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 SLC36A3Q495N2 470 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 SLC35F1Q5T1Q4 408 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 ZNF544Q6NX49 715 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 FAHD1Q6P587 224 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 SYT9Q86SS6 491 aa12.8□□□□□ -0.36
CDC42BPB-209ENST00000634889 ZBTB46Q86UZ6 589 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms