RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 OR2T4Q8NH00 348 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 ITLN2Q8WWU7 325 aaPredicted RBP7.49□□□□□ -1.21
SGMS1-211ENST00000626236 PTP4A1Q93096 173 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 NMD3Q96D46 503 aaKnown RBP7.49□□□□□ -1.21
SGMS1-211ENST00000626236 DDOQ99489 341 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 NMNAT2Q9BZQ4 307 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 OR51V1Q9H2C8 321 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 SEC61A2Q9H9S3 476 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 GALNT8Q9NY28 637 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 ELOVL5Q9NYP7 299 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 ZNF226Q9NYT6 803 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 TAS2R16Q9NYV7 291 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 DNAJC27Q9NZQ0 273 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 AASSQ9UDR5 926 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 RAB26Q9ULW5 256 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 B9D1Q9UPM9 204 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 COA3Q9Y2R0 106 aaPredicted RBP7.49□□□□□ -1.21
SGMS1-211ENST00000626236 FKBP7Q9Y680 259 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 NBASA2RRP1 2371 aa7.49□□□□□ -1.21
SGMS1-211ENST00000626236 A0A096LPE4 126 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 IGLV1-36A0A0B4J1U3 117 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 A0A1W2PPZ6 126 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 CIB4A0PJX0 185 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 MPZL2O60487 215 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 ENTPD6O75354 484 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 CLDN14O95500 239 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 GPANK1O95872 356 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 HLA-DQA2P01906 255 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 B4GALT1P15291 398 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 GABRB1P18505 474 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 COX5AP20674 150 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 AGAP20933 346 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 LAP3P28838 519 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 CDAP32320 146 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 CD79BP40259 229 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 GUCA1AP43080 201 aaPredicted RBP7.48□□□□□ -1.21
SGMS1-211ENST00000626236 HCFC1P51610 2035 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 ZNF133P52736 654 aaPredicted RBP7.48□□□□□ -1.21
SGMS1-211ENST00000626236 SNRPGP62308 76 aaKnown RBP7.48□□□□□ -1.21
SGMS1-211ENST00000626236 TGFBR3Q03167 851 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 GLO1Q04760 184 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 FAM27E3Q08E93 113 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 APOFQ13790 326 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 MAD2L1BPQ15013 274 aaPredicted RBP7.48□□□□□ -1.21
SGMS1-211ENST00000626236 P2RY6Q15077 328 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 STK11Q15831 433 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 SGCAQ16586 387 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 SFRP5Q5T4F7 317 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 AADACL4Q5VUY2 407 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 NXNL2Q5VZ03 156 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 XKRXQ6PP77 449 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 KLHL24Q6TFL4 600 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 ZNF813Q6ZN06 617 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 USP51Q70EK9 711 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 BHLHA15Q7RTS1 189 aaPredicted RBP7.48□□□□□ -1.21
SGMS1-211ENST00000626236 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.48□□□□□ -1.21
SGMS1-211ENST00000626236 GID4Q8IVV7 300 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 GLB1L2Q8IW92 636 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 ZNF433Q8N7K0 673 aaPredicted RBP7.48□□□□□ -1.21
SGMS1-211ENST00000626236 OR1K1Q8NGR3 316 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 OR6K6Q8NGW6 343 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 CNIH3Q8TBE1 160 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 ZNRF4Q8WWF5 429 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 TRUB1Q8WWH5 349 aaKnown RBP7.48□□□□□ -1.21
SGMS1-211ENST00000626236 HTRA1Q92743 480 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 KISS1RQ969F8 398 aaPredicted RBP7.48□□□□□ -1.21
SGMS1-211ENST00000626236 ITPKCQ96DU7 683 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 LRRC46Q96FV0 321 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 FOXB1Q99853 325 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 RACGAP1Q9H0H5 632 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 ZFAND3Q9H8U3 227 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 KCNJ16Q9NPI9 418 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 TMEM38BQ9NVV0 291 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 H2AFY2Q9P0M6 372 aaPredicted RBP7.48□□□□□ -1.21
SGMS1-211ENST00000626236 UGT2A1Q9Y4X1 527 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 HIVEP3Q5T1R4 2406 aa7.48□□□□□ -1.21
SGMS1-211ENST00000626236 TENM4Q6N022 2769 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 SH3D21A4FU49 640 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 TVP23AA6NH52 213 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 PRODHO43272 600 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 GLCEO94923 617 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 MPZL1O95297 269 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 SCG5P05408 212 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 GAAP10253 952 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 NPR2P20594 1047 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 SLC2A5P22732 501 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 IL32P24001 234 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 FMO3P31513 532 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 CAPZA2P47755 286 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 NUDT6P53370 316 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 CDH11P55287 796 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 SH3BGRP55822 239 aaPredicted RBP7.47□□□□□ -1.21
SGMS1-211ENST00000626236 ISL1P61371 349 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 MRPS34P82930 218 aaKnown RBP7.47□□□□□ -1.21
SGMS1-211ENST00000626236 GABRA6Q16445 453 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 OCLNQ16625 522 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 HIKESHIQ53FT3 197 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 SLC35D3Q5M8T2 416 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 LCN1P1Q5VSP4 162 aa7.47□□□□□ -1.21
SGMS1-211ENST00000626236 MEDAGQ5VYS4 303 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms