RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 ACVR1BP36896 505 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 GIPRP48546 466 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 RAD23AP54725 363 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 ATP5J2P56134 94 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 CDK5Q00535 292 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 BSPH1Q075Z2 132 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 NPRL3Q12980 569 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 KRR1Q13601 381 aaKnown RBP17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 GINS1Q14691 196 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 PTGES3Q15185 160 aaKnown RBP17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 STK11Q15831 433 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 PGGHGQ32M88 737 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 TSPO2Q5TGU0 170 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 TMEM236Q5W0B7 351 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 FAM205BPQ63HN1 556 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 HDDC2Q7Z4H3 204 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 LILRB1Q8NHL6 650 aaPredicted RBP17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 HDAC2Q92769 488 aaKnown RBP17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 MRPL13Q9BYD1 178 aaKnown RBP17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 SLCO5A1Q9H2Y9 848 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 LAMP3Q9UQV4 416 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 ABCA1O95477 2261 aa17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 SONP18583 2426 aaKnown RBP17.46■□□□□ 0.39
R3HCC1-210ENST00000625275 DLGAP1O14490 977 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 SMAD7O15105 426 aaKnown RBP17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 IDH3BO43837 385 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 SLC43A1O75387 559 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 TRMUO75648 421 aaKnown RBP17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 SNAP29O95721 258 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 IGHG1P01857 330 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 ACADSP16219 412 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 CDH2P19022 906 aaPredicted RBP17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 NOS3P29474 1203 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 PPA1Q15181 289 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 ZIK1Q3SY52 487 aaPredicted RBP17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 SLC35F1Q5T1Q4 408 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 ACSM5Q6NUN0 579 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 SSX8Q7RTT4 187 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 KBTBD8Q8NFY9 601 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 ZNF566Q969W8 418 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 MBOAT4Q96T53 435 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 KCNK17Q96T54 332 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 TOR3AQ9H497 397 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 SLC25A19Q9HC21 320 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 SLC7A10Q9NS82 523 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 BAIAP2Q9UQB8 552 aa17.45■□□□□ 0.38
R3HCC1-210ENST00000625275 A6NIZ1 184 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 ZAR1LA6NP61 321 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 IMPA2O14732 288 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 UPK3AO75631 287 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 HIST1H1CP16403 213 aaKnown RBP17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 PTDSS1P48651 473 aaKnown RBP17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 RAP1BP61224 184 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 RAP1AP62834 184 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 MYBPC1Q00872 1141 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 TIMM23BQ5SRD1 257 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 PHYHD1Q5SRE7 291 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 FBXW9Q5XUX1 488 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 PTCHD4Q6ZW05 846 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 C20orf196Q8IYI0 205 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 SYT14Q8NB59 555 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 NOXO1Q8NFA2 376 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 OR4K13Q8NH42 304 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 NEUROG1Q92886 237 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 MUCL1Q96DR8 90 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 ALKBH3Q96Q83 286 aaPredicted RBP17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 SMPD3Q9NY59 655 aaPredicted RBP17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 MALT1Q9UDY8 824 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 DPRXA6NFQ7 191 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 H7C1C5 153 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 XKRYO14609 159 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 CSNK1A1P48729 337 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 CLRN1P58418 232 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 LCN6P62502 163 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 HIST3H3Q16695 136 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 ZNF672Q499Z4 452 aaPredicted RBP17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 ADCK1Q86TW2 530 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 P2RY8Q86VZ1 359 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 UBE2J2Q8N2K1 259 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 ZNF433Q8N7K0 673 aaPredicted RBP17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 POMGNT2Q8NAT1 580 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 OR6N1Q8NGY5 312 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 TMEM54Q969K7 222 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 LRR1Q96L50 414 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 LINC00470Q9BZP3 86 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 GRIP2Q9C0E4 1043 aa17.44■□□□□ 0.38
R3HCC1-210ENST00000625275 CHD3Q12873 2000 aaKnown RBP17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 OR6C65A6NJZ3 312 aa17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 OR5H1A6NKK0 313 aa17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 CENPBD1B2RD01 187 aa17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 M0R3G1 203 aa17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 SOD3P08294 240 aa17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 DANCRP0C864 163 aa17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 GRK5P34947 590 aa17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 CDKN2AP42771 156 aaKnown RBP17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 ZNF362Q5T0B9 420 aaPredicted RBP17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 LINGO2Q7L985 606 aa17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 OR52E2Q8NGJ4 325 aa17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 NMD3Q96D46 503 aaKnown RBP17.43■□□□□ 0.38
R3HCC1-210ENST00000625275 RDH12Q96NR8 316 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms