RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 NFYBP25208 207 aa12.77□□□□□ -0.36
LDB3-209ENST00000623056 AQP2P41181 271 aa12.77□□□□□ -0.36
LDB3-209ENST00000623056 RPS27P42677 84 aaKnown RBP12.77□□□□□ -0.36
LDB3-209ENST00000623056 KIR3DL2P43630 455 aa12.77□□□□□ -0.36
LDB3-209ENST00000623056 OR4N2Q8NGD1 307 aa12.77□□□□□ -0.36
LDB3-209ENST00000623056 PIK3IP1Q96FE7 263 aa12.77□□□□□ -0.36
LDB3-209ENST00000623056 SLC6A7Q99884 636 aa12.77□□□□□ -0.36
LDB3-209ENST00000623056 TMEM100Q9NV29 134 aa12.77□□□□□ -0.36
LDB3-209ENST00000623056 VSIG4Q9Y279 399 aa12.77□□□□□ -0.36
LDB3-209ENST00000623056 ELOA3DA6NLF2 546 aaPredicted RBP12.77□□□□□ -0.37
LDB3-209ENST00000623056 ZNF736B4DX44 427 aaPredicted RBP12.77□□□□□ -0.37
LDB3-209ENST00000623056 BLOC1S5-TXNDC5H3BN57 136 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 RDH16O75452 317 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 CYB5AP00167 134 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 ZBTB25P24278 435 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 PBX2P40425 430 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 PRPS1P60891 318 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 OR7A5Q15622 319 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 ELOA3BQ3SY89 546 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 ZNF550Q7Z398 422 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 ELOA3Q8NG57 546 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 STOML3Q8TAV4 291 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 TM4SF19Q96DZ7 209 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 GPX7Q96SL4 187 aaPredicted RBP12.77□□□□□ -0.37
LDB3-209ENST00000623056 SEC11CQ9BY50 192 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 MSRAQ9UJ68 235 aa12.77□□□□□ -0.37
LDB3-209ENST00000623056 CPED1A4D0V7 1026 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 RAD1O60671 282 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 CD74P04233 296 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 CSN2P05814 226 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 ABOP16442 354 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 HLA-GP17693 338 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 CCKBRP32239 447 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 PTGFRP43088 359 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 RASGEF1BQ0VAM2 473 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 TOMM20Q15388 145 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 FAM166AQ6J272 317 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 LYG2Q86SG7 212 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 ETFBKMTQ8IXQ9 262 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 PLPP7Q8NBV4 271 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 OR52R1Q8NGF1 315 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 OR6N2Q8NGY6 317 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 C4orf45Q96LM5 186 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 OR2A5Q96R48 311 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.76□□□□□ -0.37
LDB3-209ENST00000623056 MRPS2Q9Y399 296 aaKnown RBP12.76□□□□□ -0.37
LDB3-209ENST00000623056 MUC22E2RYF6 1773 aaPredicted RBP12.76□□□□□ -0.37
LDB3-209ENST00000623056 PRR19A6NJB7 356 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 F8VVB4 439 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 F8VWA3 439 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 H7C1C5 153 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 SGCEO43556 437 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 OR2T1O43869 369 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 CTSVO60911 334 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 FGF19O95750 216 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 GPR75O95800 540 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 ADH1CP00326 375 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 FABP1P07148 127 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 DCNP07585 359 aaKnown RBP12.76□□□□□ -0.37
LDB3-209ENST00000623056 PGAM2P15259 253 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 LCN6P62502 163 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 PPP1R1AQ13522 171 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 ALG11Q2TAA5 492 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 PRRT3Q5FWE3 981 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 WDR38Q5JTN6 314 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 ASPHD2Q6ICH7 369 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 PRSS41Q7RTY9 318 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 DPY19L4Q7Z388 723 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 SLC25A42Q86VD7 318 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 SKA3Q8IX90 412 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 LCN9Q8WX39 176 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 SLC41A2Q96JW4 573 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 DCBLD2Q96PD2 775 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 KIR3DX1Q9H7L2 352 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 PHPT1Q9NRX4 125 aaPredicted RBP12.76□□□□□ -0.37
LDB3-209ENST00000623056 UQCC1Q9NVA1 299 aa12.76□□□□□ -0.37
LDB3-209ENST00000623056 PTPRSQ13332 1948 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 CACNA1CQ13936 2221 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 TBC1D3IA0A087WXS9 549 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 NUDT19A8MXV4 375 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 ZNF208O43345 1280 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 CEACAM5P06731 702 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 TPT1P13693 172 aaKnown RBP12.75□□□□□ -0.37
LDB3-209ENST00000623056 CEBPBP17676 345 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 AVPR2P30518 371 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 DRD3P35462 400 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 PPM1AP35813 382 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 SNRPEP62304 92 aaKnown RBP12.75□□□□□ -0.37
LDB3-209ENST00000623056 PSG6Q00889 435 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 NKPD1Q17RQ9 610 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 FAM109BQ6ICB4 259 aaPredicted RBP12.75□□□□□ -0.37
LDB3-209ENST00000623056 LRRC69Q6ZNQ3 347 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 DGAT2L6Q6ZPD8 337 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 RHOUQ7L0Q8 258 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 SLC16A13Q7RTY0 426 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 PAQR4Q8N4S7 273 aaPredicted RBP12.75□□□□□ -0.37
LDB3-209ENST00000623056 SLC30A7Q8NEW0 376 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 RNF141Q8WVD5 230 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 CTHRC1Q96CG8 243 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 CST11Q9H112 138 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms