RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SPIN2BQ9BPZ2 258 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 TCEAL2Q9H3H9 227 aaPredicted RBP14.75□□□□□ -0.05
GABRB3-215ENST00000622697 TGM1P22735 817 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 SSX1Q16384 188 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 TMEM201Q5SNT2 666 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 OR10K2Q6IF99 312 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 PHYHIPQ92561 330 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 C8orf44Q96CB5 159 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 SMIM19Q96E16 107 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 IGHV3-9P01782 118 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 HOXB9P17482 250 aaPredicted RBP14.74□□□□□ -0.05
GABRB3-215ENST00000622697 ARG2P78540 354 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 CDK5R1Q15078 307 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 ELAVL1Q15717 326 aaKnown RBP14.74□□□□□ -0.05
GABRB3-215ENST00000622697 ZNF547Q8IVP9 402 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 MKXQ8IYA7 352 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 ZFAND1Q8TCF1 268 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 NANOS1Q8WY41 292 aaKnown RBP14.74□□□□□ -0.05
GABRB3-215ENST00000622697 NELFAQ9H3P2 528 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 ZFP57Q9NU63 452 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 KCNG2Q9UJ96 466 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 LOC107986453A0A1B0GWG9 222 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 STK17BO94768 372 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 C1QCP02747 245 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 PTBP1P26599 531 aaKnown RBP eCLIP14.74□□□□□ -0.05
GABRB3-215ENST00000622697 MISPQ8IVT2 679 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 C20orf141Q9NUB4 165 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 NXPH3O95157 252 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 CALCBP10092 127 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 CD27P26842 260 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 P2RX1P51575 399 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 ZNF674Q2M3X9 581 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 DCBLD2Q96PD2 775 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 OR14J1Q9UGF5 321 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 A0A1W2PNR3 127 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 CD300LBA8K4G0 201 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 TMUB2Q71RG4 321 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 NAT6Q93015 286 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 RPP25Q9BUL9 199 aaKnown RBP14.74□□□□□ -0.05
GABRB3-215ENST00000622697 MED29Q9NX70 200 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 B3GNT2Q9NY97 397 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 TMEM235A6NFC5 223 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 ALOX12BO75342 701 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 PRSS23O95084 383 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 NSA2O95478 260 aaKnown RBP14.74□□□□□ -0.05
GABRB3-215ENST00000622697 SSR4P51571 173 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 EPHA4P54764 986 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 S100A12P80511 92 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 C8orf82Q6P1X6 216 aaPredicted RBP14.74□□□□□ -0.05
GABRB3-215ENST00000622697 PRSS41Q7RTY9 318 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 CNEP1R1Q8N9A8 125 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 RBPMSQ93062 196 aaKnown RBP14.74□□□□□ -0.05
GABRB3-215ENST00000622697 SDSLQ96GA7 329 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 KLK11Q9UBX7 282 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 MMP17Q9ULZ9 603 aa14.74□□□□□ -0.05
GABRB3-215ENST00000622697 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.73□□□□□ -0.05
GABRB3-215ENST00000622697 NAGAP17050 411 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 HOXC8P31273 242 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 PPT1P50897 306 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 SLC35A1P78382 337 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 C9orf50Q5SZB4 431 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 FCRL6Q6DN72 434 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 AGBL5Q8NDL9 886 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 HRASLSQ9HDD0 168 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 BIN3Q9NQY0 253 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 SLC17A4Q9Y2C5 497 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 IFITM5A6NNB3 132 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 TRAPPC2LH3BP13 241 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 OLFM2O95897 454 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 GLI4P10075 376 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 LILRA6Q6PI73 481 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 OR51E1Q8TCB6 317 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 SECTM1Q8WVN6 248 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 FANCFQ9NPI8 374 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 PCDHGA5Q9Y5G8 931 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 SULT1B1O43704 296 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 NTN1O95631 604 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 TRAPPC2P0DI81 140 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 TRAPPC2BP0DI82 140 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 ARPC5LQ9BPX5 153 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.73□□□□□ -0.05
GABRB3-215ENST00000622697 RAB22AQ9UL26 194 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 A0A0U1RQK1 487 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 PRAMEF25A6NGN4 478 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 ZNF780AO75290 641 aaPredicted RBP14.73□□□□□ -0.05
GABRB3-215ENST00000622697 PTHLHP12272 177 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 DCTDP32321 178 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 CRYBB2P43320 205 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 GPR119Q8TDV5 335 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 ISYNA1Q9NPH2 558 aa14.73□□□□□ -0.05
GABRB3-215ENST00000622697 AIPO00170 330 aa14.72□□□□□ -0.05
GABRB3-215ENST00000622697 NRG2O14511 850 aaPredicted RBP14.72□□□□□ -0.05
GABRB3-215ENST00000622697 MT-ATP6P00846 226 aa14.72□□□□□ -0.05
GABRB3-215ENST00000622697 CLDN20P56880 219 aa14.72□□□□□ -0.05
GABRB3-215ENST00000622697 PLA2G7Q13093 441 aa14.72□□□□□ -0.05
GABRB3-215ENST00000622697 C5orf46Q6UWT4 87 aa14.72□□□□□ -0.05
GABRB3-215ENST00000622697 CALHM2Q9HA72 323 aa14.72□□□□□ -0.05
GABRB3-215ENST00000622697 ZNF286AQ9HBT8 521 aa14.72□□□□□ -0.05
GABRB3-215ENST00000622697 ITGB2P05107 769 aa14.72□□□□□ -0.05
GABRB3-215ENST00000622697 MAP2K6P52564 334 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms