RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 GRINAQ7Z429 371 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 ZNF680Q8NEM1 530 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 ASB12Q8WXK4 309 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 DCLRE1CQ96SD1 692 aaKnown RBP11.68□□□□□ -0.54
MSH6-215ENST00000622629 MNTQ99583 582 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 C1orf198Q9H425 327 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 MED29Q9NX70 200 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 SLCO1C1Q9NYB5 712 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 TRAV1-2A0A0B4J238 106 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 LOC100289279A0A1B0GTE1 492 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 ZNF850A8MQ14 1090 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 WNT1P04628 370 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 CDKN2AP42771 156 aaKnown RBP11.68□□□□□ -0.54
MSH6-215ENST00000622629 SSX6Q7RTT6 188 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 TRAPPC6BQ86SZ2 158 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 SP7Q8TDD2 431 aaPredicted RBP11.68□□□□□ -0.54
MSH6-215ENST00000622629 GPR119Q8TDV5 335 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 TOMM40LQ969M1 308 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 MOGAT1Q96PD6 335 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 PRRT1Q99946 306 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 SLC19A3Q9BZV2 496 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 CCDC86Q9H6F5 360 aaKnown RBP11.68□□□□□ -0.54
MSH6-215ENST00000622629 UBE2ZQ9H832 354 aaPredicted RBP11.68□□□□□ -0.54
MSH6-215ENST00000622629 TAS2R4Q9NYW5 299 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 MYLKQ15746 1914 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 GPR171O14626 319 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 RBMXL2O75526 392 aaKnown RBP11.67□□□□□ -0.54
MSH6-215ENST00000622629 IGHG1P01857 330 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 FZD2Q14332 565 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 ZNF74Q16587 644 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 LPAL2Q16609 132 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 OR5M1Q8NGP8 315 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 OR52A1Q9UKL2 312 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 IGHV5-51A0A0C4DH38 117 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 A0A1B0GX78 115 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 OTX2P32243 289 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 FAM57BQ71RH2 274 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 GTPBP8Q8N3Z3 284 aaPredicted RBP11.67□□□□□ -0.54
MSH6-215ENST00000622629 DCUN1D4Q92564 292 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 SORCS2Q96PQ0 1159 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 SPACA5Q96QH8 159 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 GABRG3Q99928 467 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 GSX2Q9BZM3 304 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 PTRH2Q9Y3E5 179 aaKnown RBP11.67□□□□□ -0.54
MSH6-215ENST00000622629 TPRP12270 2363 aaKnown RBP11.67□□□□□ -0.54
MSH6-215ENST00000622629 A0A1W2PQF6 199 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 CYR61O00622 381 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 LANCL1O43813 399 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 ICMTO60725 284 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 TP53P04637 393 aaPredicted RBP11.67□□□□□ -0.54
MSH6-215ENST00000622629 S100A9P06702 114 aaKnown RBP11.67□□□□□ -0.54
MSH6-215ENST00000622629 CALCBP10092 127 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 BDKRB2P30411 391 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 MMP15P51511 669 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 DYRK1AQ13627 763 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 LCN10Q6JVE6 187 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 PPP1R3BQ86XI6 285 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 ANKRD9Q96BM1 317 aaPredicted RBP11.67□□□□□ -0.54
MSH6-215ENST00000622629 FOXQ1Q9C009 403 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 FKRPQ9H9S5 495 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 MMP25Q9NPA2 562 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 CACNA1EQ15878 2313 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 ARHGEF17Q96PE2 2063 aaPredicted RBP11.67□□□□□ -0.54
MSH6-215ENST00000622629 TMEM235A6NFC5 223 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 ZNF705EA8MWA4 302 aaPredicted RBP11.67□□□□□ -0.54
MSH6-215ENST00000622629 C5orf67F2Z3F1 127 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 TBX6O95947 436 aaPredicted RBP11.67□□□□□ -0.54
MSH6-215ENST00000622629 RAF1P04049 648 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 LCATP04180 440 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 ZGLP1P0C6A0 271 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 HOXD11P31277 338 aaPredicted RBP11.67□□□□□ -0.54
MSH6-215ENST00000622629 DMRTC1Q5HYR2 192 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 PXKQ7Z7A4 578 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 STT3BQ8TCJ2 826 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 C10orf90Q96M02 699 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 LRFN5Q96NI6 719 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 SLC23A1Q9UHI7 598 aa11.67□□□□□ -0.54
MSH6-215ENST00000622629 HEATR5BQ9P2D3 2071 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 EIF4E2O60573 245 aaKnown RBP11.66□□□□□ -0.54
MSH6-215ENST00000622629 WDPCPO95876 746 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 MT-ATP6P00846 226 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 GLP1RP43220 463 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 P2RX1P51575 399 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 CCR5P51681 352 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 HERV-K104P61576 105 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 BTN1A1Q13410 526 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 C2orf76Q3KRA6 126 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 OR52B4Q8NGK2 314 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 GPBAR1Q8TDU6 330 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 APMAPQ9HDC9 416 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 ACKR4Q9NPB9 350 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 KCNIP3Q9Y2W7 256 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 TMEM229AB2RXF0 380 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 C2CD4DB7Z1M9 353 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 ARPC3O15145 178 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 EFEMP2O95967 443 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 GUCA2AQ02747 115 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 SLC9A3R2Q15599 337 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 PRTGQ2VWP7 1150 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 LINC00303Q3SY05 128 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms