RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 LGALS13Q9UHV8 139 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 CACNG2Q9Y698 323 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 PRSS37A4D1T9 235 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 HUS1O60921 280 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 SUPT3HO75486 399 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 ZNF30P17039 623 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 BCKDHBP21953 392 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 HRH1P35367 487 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 UQCRFS1P47985 274 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 LHX2P50458 406 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 CRISP3P54108 245 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 SLC25A11Q02978 314 aaKnown RBP3.27□□□□□ -1.89
CPNE3-213ENST00000622183 TWF1Q12792 350 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 KCTD19Q17RG1 926 aaPredicted RBP3.27□□□□□ -1.89
CPNE3-213ENST00000622183 TTLL9Q3SXZ7 439 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 XKR4Q5GH76 650 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 TWF2Q6IBS0 349 aaKnown RBP3.27□□□□□ -1.89
CPNE3-213ENST00000622183 KATNAL2Q8IYT4 538 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 MREGQ8N565 214 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 PRELID2Q8N945 189 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 ACTRT1Q8TDG2 376 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 CD300LFQ8TDQ1 290 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 RNF138Q8WVD3 245 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 DNAJC19Q96DA6 116 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 SERPINB12Q96P63 405 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 MRPL37Q9BZE1 423 aaKnown RBP3.27□□□□□ -1.89
CPNE3-213ENST00000622183 ABCB10Q9NRK6 738 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 HRASLS2Q9NWW9 162 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 STOX2Q9P2F5 926 aaPredicted RBP3.27□□□□□ -1.89
CPNE3-213ENST00000622183 PSME2Q9UL46 239 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 SLC17A4Q9Y2C5 497 aa3.27□□□□□ -1.89
CPNE3-213ENST00000622183 CENPJQ9HC77 1338 aaPredicted RBP3.26□□□□□ -1.89
CPNE3-213ENST00000622183 TRAV25A0A0B4J276 109 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 IGHV3-64DA0A0J9YX35 117 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 KBTBD11-OT1A0A1B0GTJ5 212 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 NCF1BA6NI72 391 aaPredicted RBP3.26□□□□□ -1.89
CPNE3-213ENST00000622183 LYRM9A8MSI8 78 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 NCF1CA8MVU1 366 aaPredicted RBP3.26□□□□□ -1.89
CPNE3-213ENST00000622183 SPECC1L-ADORA2AF8WAN1 911 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 LAD1O00515 517 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 EIF4E2O60573 245 aaKnown RBP3.26□□□□□ -1.89
CPNE3-213ENST00000622183 DPM1O60762 260 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 ACSM4P0C7M7 580 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 HMOX2P30519 316 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 CSNK1EP49674 416 aaKnown RBP3.26□□□□□ -1.89
CPNE3-213ENST00000622183 ILKQ13418 452 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 PRPSAP1Q14558 356 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 PGGHGQ32M88 737 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 PIGGQ5H8A4 983 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 ANKRD22Q5VYY1 191 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 SPECC1LQ69YQ0 1117 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 TTC23LQ6PF05 361 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 LYPD2Q6UXB3 125 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 LKAAEAR1Q8TD35 194 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 CAPSLQ8WWF8 208 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 PEX13Q92968 403 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 PRRC1Q96M27 445 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 XPO6Q96QU8 1125 aaKnown RBP3.26□□□□□ -1.89
CPNE3-213ENST00000622183 OR5B12Q96R08 314 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 ELOVL6Q9H5J4 265 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 CRLF2Q9HC73 371 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 MRPS30Q9NP92 439 aaKnown RBP3.26□□□□□ -1.89
CPNE3-213ENST00000622183 CCDC59Q9P031 241 aaKnown RBP3.26□□□□□ -1.89
CPNE3-213ENST00000622183 CLN8Q9UBY8 286 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 TBC1D24Q9ULP9 559 aa3.26□□□□□ -1.89
CPNE3-213ENST00000622183 PRG3Q9Y2Y8 225 aaPredicted RBP3.26□□□□□ -1.89
CPNE3-213ENST00000622183 TP53BP1Q12888 1972 aaPredicted RBP3.25□□□□□ -1.89
CPNE3-213ENST00000622183 NFASCO94856 1347 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 MAPK8IP3Q9UPT6 1336 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 RAI1Q7Z5J4 1906 aaPredicted RBP3.25□□□□□ -1.89
CPNE3-213ENST00000622183 GOLGA6L7A0A1B0GV03 622 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 PLAC8L1A1L4L8 177 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 FAM166BA8MTA8 275 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 H0YHG0 523 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 KMOO15229 486 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 SRP72O76094 671 aaKnown RBP3.25□□□□□ -1.89
CPNE3-213ENST00000622183 IGLV2-23P01705 113 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 PCCAP05165 728 aaPredicted RBP3.25□□□□□ -1.89
CPNE3-213ENST00000622183 GSTM3P21266 225 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 DRD3P35462 400 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 GPX4P36969 197 aaPredicted RBP3.25□□□□□ -1.89
CPNE3-213ENST00000622183 CXCL5P42830 114 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 KRTAP10-3P60369 221 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 SLC7A9P82251 487 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 HMGCS1Q01581 520 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 MXD1Q05195 221 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 ITIH4Q14624 930 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 PON3Q15166 354 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 TMEM183BQ1AE95 376 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 CCNJQ5T5M9 372 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 TEX43Q6ZNM6 134 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 ZNF493Q6ZR52 646 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 OTUD6AQ7L8S5 288 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 STRADAQ7RTN6 431 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 SH2D6Q7Z4S9 175 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 CMC1Q7Z7K0 106 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 TMEM183AQ8IXX5 376 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 STPG2Q8N412 459 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 Q8N7P7 452 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 MDS2Q8NDY4 140 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms