RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TMIGD3P0DMS9 266 aaPredicted RBP8.48□□□□□ -1.05
PDPN-212ENST00000621990 CPN1P15169 458 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 FSTP19883 344 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 PER3P56645 1201 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 C19orf57Q0VDD7 668 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 PLA2G7Q13093 441 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 SHBQ15464 509 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 SFRP4Q6FHJ7 346 aaPredicted RBP8.48□□□□□ -1.05
PDPN-212ENST00000621990 KCTD18Q6PI47 426 aaPredicted RBP8.48□□□□□ -1.05
PDPN-212ENST00000621990 RABEPKQ7Z6M1 372 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 CATSPERDQ86XM0 798 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 GLB1L2Q8IW92 636 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 NUBPLQ8TB37 319 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 RADILQ96JH8 1075 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 ULBP3Q9BZM4 244 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 ZNF436Q9C0F3 470 aaPredicted RBP8.48□□□□□ -1.05
PDPN-212ENST00000621990 HEXA-AS1Q9H8Q6 139 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 MRPL15Q9P015 296 aaKnown RBP8.48□□□□□ -1.05
PDPN-212ENST00000621990 WNT16Q9UBV4 365 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 ELF5Q9UKW6 265 aaPredicted RBP8.48□□□□□ -1.05
PDPN-212ENST00000621990 FLVCR2Q9UPI3 526 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 UNC13CQ8NB66 2214 aa8.48□□□□□ -1.05
PDPN-212ENST00000621990 ARID1BQ8NFD5 2236 aaPredicted RBP8.48□□□□□ -1.05
PDPN-212ENST00000621990 GGT3PA6NGU5 568 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 A6NIZ1 184 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 H7C417 338 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 SLC17A2O00624 439 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 ICMTO60725 284 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 KHDRBS3O75525 346 aaKnown RBP8.47□□□□□ -1.05
PDPN-212ENST00000621990 CTAG2O75638 210 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 NDUFB6O95139 128 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 SYPP08247 313 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 ITGA5P08648 1049 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 PNLIPP16233 465 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 IGFBP3P17936 291 aaPredicted RBP8.47□□□□□ -1.05
PDPN-212ENST00000621990 VEGFCP49767 419 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 RAP1BP61224 184 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 RAP1AP62834 184 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 GLO1Q04760 184 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 THOC7Q6I9Y2 204 aaKnown RBP8.47□□□□□ -1.05
PDPN-212ENST00000621990 GLDNQ6ZMI3 551 aaPredicted RBP8.47□□□□□ -1.05
PDPN-212ENST00000621990 SLC35D2Q76EJ3 337 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 ANKRD37Q7Z713 158 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 SPICQ8N5J4 248 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 BEST4Q8NFU0 473 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 MFSD8Q8NHS3 518 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 STT3BQ8TCJ2 826 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 ABHD6Q9BV23 337 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 OR11A1Q9GZK7 315 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 FANCFQ9NPI8 374 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 MTFP1Q9UDX5 166 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 MS4A18H0YCH9 400 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 ZNF208O43345 1280 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 SSNA1O43805 119 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 ZNF354AO60765 605 aaPredicted RBP8.47□□□□□ -1.05
PDPN-212ENST00000621990 OR6A2O95222 327 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 ONECUT2O95948 504 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 HLA-DQA2P01906 255 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 IL5P05113 134 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 SPARCP09486 303 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 DCTDP32321 178 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 ADAM8P78325 824 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 MFGE8Q08431 387 aaPredicted RBP8.47□□□□□ -1.05
PDPN-212ENST00000621990 PUDPQ08623 228 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 C17orf67Q0P5P2 114 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 MFSD13AQ14CX5 517 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 ETFDHQ16134 617 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 MS4A18Q3C1V0 323 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 TEX261Q6UWH6 196 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 TMPRSS9Q7Z410 1059 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 BIVMQ86UB2 503 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 OR52N5Q8NH56 324 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 ASB5Q8WWX0 329 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 ASB10Q8WXI3 467 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 TTC9Q92623 222 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 CLDN23Q96B33 292 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 NXPE2Q96DL1 559 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 DNAJA3Q96EY1 480 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 SHDQ96IW2 340 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 NOX3Q9HBY0 568 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 LRP12Q9Y561 859 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 U3KQ87 197 aa8.47□□□□□ -1.05
PDPN-212ENST00000621990 ALPK2Q86TB3 2170 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 LOC100289279A0A1B0GTE1 492 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 TMEM200CA6NKL6 621 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 SNRPGP15A8MWD9 76 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 K7ESF4 209 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 WNT11O96014 354 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 ISG15P05161 165 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 PTHLHP12272 177 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 MYF5P13349 255 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 NAGAP17050 411 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 CCKBRP32239 447 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 APOBEC1P41238 236 aaKnown RBP8.46□□□□□ -1.05
PDPN-212ENST00000621990 LINC00303Q3SY05 128 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 WDR45BQ5MNZ6 344 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 TMEM225Q6GV28 225 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 TMEM71Q6P5X7 295 aa8.46□□□□□ -1.05
PDPN-212ENST00000621990 ZNF574Q6ZN55 896 aaPredicted RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms