RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SULT1C4O75897 302 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 TGM4P49221 684 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 GFRA1P56159 465 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 EIF2B1Q14232 305 aaKnown RBP19.11■□□□□ 0.65
SPAST-204ENST00000621856 ZNF846Q147U1 533 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 ZNF829Q3KNS6 432 aaPredicted RBP19.11■□□□□ 0.65
SPAST-204ENST00000621856 EGFL6Q8IUX8 553 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 GLB1L2Q8IW92 636 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 OR9K2Q8NGE7 335 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 BORCS5Q969J3 196 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 CXCL13O43927 109 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 SERPINA3P01011 423 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 S100A5P33763 92 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 MAGEA5P43359 124 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 EIF1AXP47813 144 aaKnown RBP19.11■□□□□ 0.65
SPAST-204ENST00000621856 NHLH1Q02575 133 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 MRPL28Q13084 256 aaKnown RBP19.11■□□□□ 0.65
SPAST-204ENST00000621856 HNRNPA0Q13151 305 aaKnown RBP19.11■□□□□ 0.65
SPAST-204ENST00000621856 POU4F3Q15319 338 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 LIPNQ5VXI9 398 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 CREB3L2Q70SY1 520 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 TMEM251Q8N6I4 163 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 ZNF454Q8N9F8 522 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 OR10H5Q8NGA6 315 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 HAVCR2Q8TDQ0 301 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 HAS2Q92819 552 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 SLC25A46Q96AG3 418 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 AMELYQ99218 206 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 BARHL1Q9BZE3 327 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 WDR12Q9GZL7 423 aaKnown RBP19.11■□□□□ 0.65
SPAST-204ENST00000621856 AKIP1Q9NQ31 210 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 SLCO1C1Q9NYB5 712 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 KLHL9Q9P2J3 617 aa19.11■□□□□ 0.65
SPAST-204ENST00000621856 A0A1W2PPL8 197 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 SMAD9O15198 467 aaKnown RBP19.1■□□□□ 0.65
SPAST-204ENST00000621856 ABHD16AO95870 558 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 CD1AP06126 327 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 CELA3AP09093 270 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 GAAP10253 952 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 SUCLG1P53597 346 aaKnown RBP19.1■□□□□ 0.65
SPAST-204ENST00000621856 DEFB109BQ30KR1 87 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 ZNF766Q5HY98 468 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 PDSS1Q5T2R2 415 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 CEACAM19Q7Z692 300 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 OR10D3Q8NH80 312 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 FNDC8Q8TC99 324 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 OR8B4Q96RC9 309 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 CRNNQ9UBG3 495 aaPredicted RBP19.1■□□□□ 0.65
SPAST-204ENST00000621856 FREM2Q5SZK8 3169 aa19.1■□□□□ 0.65
SPAST-204ENST00000621856 SMIM30A4D0T7 59 aa19.09■□□□□ 0.65
SPAST-204ENST00000621856 DVL2O14641 736 aa19.09■□□□□ 0.65
SPAST-204ENST00000621856 GPRIN2O60269 458 aa19.09■□□□□ 0.65
SPAST-204ENST00000621856 UPK3AO75631 287 aa19.09■□□□□ 0.65
SPAST-204ENST00000621856 BMP4P12644 408 aa19.09■□□□□ 0.65
SPAST-204ENST00000621856 ACSM3Q53FZ2 586 aa19.09■□□□□ 0.65
SPAST-204ENST00000621856 KCTD18Q6PI47 426 aaPredicted RBP19.09■□□□□ 0.65
SPAST-204ENST00000621856 FDCSPQ8NFU4 85 aa19.09■□□□□ 0.65
SPAST-204ENST00000621856 OR13C5Q8NGS8 318 aa19.09■□□□□ 0.65
SPAST-204ENST00000621856 ADGRG7Q96K78 797 aa19.09■□□□□ 0.65
SPAST-204ENST00000621856 PEX16Q9Y5Y5 336 aa19.09■□□□□ 0.65
SPAST-204ENST00000621856 CUL9Q8IWT3 2517 aa19.09■□□□□ 0.65
SPAST-204ENST00000621856 A0A075B6Q4 140 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 HSPB2A8KAH6 182 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 J3QRK9 145 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 GLSO94925 669 aaPredicted RBP19.08■□□□□ 0.65
SPAST-204ENST00000621856 NR2C1P13056 603 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 CALRP27797 417 aaKnown RBP19.08■□□□□ 0.65
SPAST-204ENST00000621856 LAP3P28838 519 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 PPIAP62937 165 aaKnown RBP19.08■□□□□ 0.65
SPAST-204ENST00000621856 SLC17A1Q14916 467 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 HSPB2Q16082 182 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 INAQ16352 499 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 SLC25A47Q6Q0C1 308 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 LRRN1Q6UXK5 716 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 ASB18Q6ZVZ8 466 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 SPATC1Q76KD6 591 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.08■□□□□ 0.65
SPAST-204ENST00000621856 KRT77Q7Z794 578 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 TMEM178AQ8NBL3 297 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 C11orf40Q8WZ69 217 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 SCMH1Q96GD3 660 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 ZNF385AQ96PM9 386 aaKnown RBP19.08■□□□□ 0.65
SPAST-204ENST00000621856 PDCD1LG2Q9BQ51 273 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 ABHD6Q9BV23 337 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 SF3B5Q9BWJ5 86 aaKnown RBP19.08■□□□□ 0.65
SPAST-204ENST00000621856 SLC6A15Q9H2J7 730 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 SMURF1Q9HCE7 757 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 TIGARQ9NQ88 270 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 CEP250Q9BV73 2442 aa19.08■□□□□ 0.65
SPAST-204ENST00000621856 HRGP04196 525 aa19.08■□□□□ 0.64
SPAST-204ENST00000621856 QDPRP09417 244 aa19.08■□□□□ 0.64
SPAST-204ENST00000621856 MYL9P24844 172 aa19.08■□□□□ 0.64
SPAST-204ENST00000621856 CSNK1A1P48729 337 aa19.08■□□□□ 0.64
SPAST-204ENST00000621856 NANOS3P60323 173 aaKnown RBP19.08■□□□□ 0.64
SPAST-204ENST00000621856 ALKBH1Q13686 389 aaKnown RBP19.08■□□□□ 0.64
SPAST-204ENST00000621856 RSPO4Q2I0M5 234 aaPredicted RBP19.08■□□□□ 0.64
SPAST-204ENST00000621856 LINC00346Q8IVM7 164 aa19.08■□□□□ 0.64
SPAST-204ENST00000621856 OR6N1Q8NGY5 312 aa19.08■□□□□ 0.64
SPAST-204ENST00000621856 RPS4Y2Q8TD47 263 aa19.08■□□□□ 0.64
SPAST-204ENST00000621856 MCHR2Q969V1 340 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms