RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 EFNB1P98172 346 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 SNAPC1Q16533 368 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 MEP1BQ16820 701 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 THEM4Q5T1C6 240 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 PLBD1Q6P4A8 553 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 UGT2A3Q6UWM9 527 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 TCEANCQ8N8B7 351 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 WDR31Q8NA23 367 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 OR52N5Q8NH56 324 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 NABP1Q96AH0 204 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 RBP7Q96R05 134 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 FOXB1Q99853 325 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 SH3GL3Q99963 347 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 NMNAT2Q9BZQ4 307 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 FAM118AQ9NWS6 357 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 B9D1Q9UPM9 204 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 BAIAP2Q9UQB8 552 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 ORC6Q9Y5N6 252 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 APCP25054 2843 aa11.94□□□□□ -0.5
NEK3-210ENST00000620675 CENPBD1B2RD01 187 aa11.94□□□□□ -0.5
NEK3-210ENST00000620675 IL32P24001 234 aa11.94□□□□□ -0.5
NEK3-210ENST00000620675 ZNF813Q6ZN06 617 aa11.94□□□□□ -0.5
NEK3-210ENST00000620675 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.94□□□□□ -0.5
NEK3-210ENST00000620675 CPOQ8IVL8 374 aa11.94□□□□□ -0.5
NEK3-210ENST00000620675 HRASLS5Q96KN8 279 aa11.94□□□□□ -0.5
NEK3-210ENST00000620675 MUS81Q96NY9 551 aa11.94□□□□□ -0.5
NEK3-210ENST00000620675 C1QTNF6Q9BXI9 259 aa11.94□□□□□ -0.5
NEK3-210ENST00000620675 SEC61A2Q9H9S3 476 aa11.94□□□□□ -0.5
NEK3-210ENST00000620675 NOX3Q9HBY0 568 aa11.94□□□□□ -0.5
NEK3-210ENST00000620675 B3GAT2Q9NPZ5 323 aa11.94□□□□□ -0.5
NEK3-210ENST00000620675 TMEM38BQ9NVV0 291 aa11.94□□□□□ -0.5
NEK3-210ENST00000620675 A0A1W2PPL8 197 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 RIIAD1A6NNX1 92 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 RENP00797 406 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 PSKH1P11801 424 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 TAB1Q15750 504 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 TBRG1Q3YBR2 411 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 SEZ6L2Q6UXD5 910 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 SKA3Q8IX90 412 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 LRRC18Q8N456 261 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 FAM81AQ8TBF8 368 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 EMC7Q9NPA0 242 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 KLHL21Q9UJP4 597 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 NDRG4Q9ULP0 352 aaKnown RBP11.93□□□□□ -0.5
NEK3-210ENST00000620675 SETXQ7Z333 2677 aaKnown RBP11.93□□□□□ -0.5
NEK3-210ENST00000620675 TLX2O43763 284 aaPredicted RBP11.93□□□□□ -0.5
NEK3-210ENST00000620675 HLA-HP01893 362 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 GNAO1P09471 354 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 ZNF3P17036 446 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 SPI1P17947 270 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 GGT2P36268 569 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 RPS27P42677 84 aaKnown RBP11.93□□□□□ -0.5
NEK3-210ENST00000620675 SGCAQ16586 387 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 ABHD12BQ7Z5M8 362 aaPredicted RBP11.93□□□□□ -0.5
NEK3-210ENST00000620675 ZBTB46Q86UZ6 589 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 PACRGLQ8N7B6 248 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 CYGBQ8WWM9 190 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 OR51V1Q9H2C8 321 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 ZNF226Q9NYT6 803 aa11.93□□□□□ -0.5
NEK3-210ENST00000620675 KLF2Q9Y5W3 355 aaPredicted RBP11.93□□□□□ -0.5
NEK3-210ENST00000620675 CSMD1Q96PZ7 3565 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 LOC100130705A0A1B0GUX0 176 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 TVP23AA6NH52 213 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 OR5H1A6NKK0 313 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 TFP02787 698 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 HMGN1P05114 100 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 GAAP10253 952 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 CENPAP49450 140 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 PCYT1AP49585 367 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 PIGFQ07326 219 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 LINC01590Q5TEZ4 76 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 MYPOPQ86VE0 399 aaPredicted RBP11.92□□□□□ -0.5
NEK3-210ENST00000620675 SLC22A24Q8N4F4 322 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 ZNF511Q8NB15 262 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 SNX18Q96RF0 628 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 PITX2Q99697 317 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 SLC17A5Q9NRA2 495 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 MRPL22Q9NWU5 206 aaKnown RBP11.92□□□□□ -0.5
NEK3-210ENST00000620675 NPAP1Q9NZP6 1156 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 CRIM1Q9NZV1 1036 aa11.92□□□□□ -0.5
NEK3-210ENST00000620675 MAP1AP78559 2803 aaPredicted RBP11.92□□□□□ -0.5
NEK3-210ENST00000620675 SIAH2O43255 324 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 AHCYL1O43865 530 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 KHDRBS3O75525 346 aaKnown RBP11.91□□□□□ -0.5
NEK3-210ENST00000620675 IFNGP01579 166 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 LAP3P28838 519 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 ADARB1P78563 741 aaKnown RBP11.91□□□□□ -0.5
NEK3-210ENST00000620675 ANKRD16Q6P6B7 361 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 FOXL2NBQ6ZUU3 175 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 ZNF627Q7L945 461 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 CXXC5Q7LFL8 322 aaKnown RBP11.91□□□□□ -0.5
NEK3-210ENST00000620675 DMRTC2Q8IXT2 367 aaPredicted RBP11.91□□□□□ -0.5
NEK3-210ENST00000620675 ACBD4Q8NC06 268 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 PROKR2Q8NFJ6 384 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 SMAP2Q8WU79 429 aaPredicted RBP11.91□□□□□ -0.5
NEK3-210ENST00000620675 PLEKHA8Q96JA3 519 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 MED18Q9BUE0 208 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 POLE4Q9NR33 117 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 DNAJC27Q9NZQ0 273 aa11.91□□□□□ -0.5
NEK3-210ENST00000620675 ENOPH1Q9UHY7 261 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms