RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	STK35	Q8TDR2	534 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	KTI12	Q96EK9	354 aa	Predicted RBP	13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	KLHDC3	Q9BQ90	382 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	EXO5	Q9H790	373 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	RASL12	Q9NYN1	266 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	TMEM272	A0A1B0GTI8	110 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644		A6NCN8	305 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	AKR7A3	O95154	331 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	RAB40AL	P0C0E4	278 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	MAPK3	P27361	379 aa	Predicted RBP	13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	RPL18	Q07020	188 aa	Known RBP	13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	RBMS2	Q15434	407 aa	Known RBP	13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	LINC01590	Q5TEZ4	76 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	DEFB119	Q8N690	84 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	LINC00469	Q8N7U9	141 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	BOLL	Q8N9W6	283 aa	Known RBP	13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	OR4C16	Q8NGL9	310 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	RAB40A	Q8WXH6	277 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	MIB2	Q96AX9	1013 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	ATG5	Q9H1Y0	275 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	KCNG2	Q9UJ96	466 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	GPR31	O00270	319 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	HCRTR2	O43614	444 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	FAU	P35544	74 aa	Known RBP	13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	TNFRSF4	P43489	277 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	GGTLC2	Q14390	218 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	LRRC37A5P	Q49AS3	106 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	SLC35D3	Q5M8T2	416 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	UNQ9370/PRO34162	Q6UXP9	181 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	SLC16A9	Q7RTY1	509 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	ZNF321P	Q8N8H1	164 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	LPAR4	Q99677	370 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	MAP3K3	Q99759	626 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	SLC39A1	Q9NY26	324 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	PCOLCE2	Q9UKZ9	415 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	MOK	Q9UQ07	419 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	ARID1A	O14497	2285 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	EFCAB7	A8K855	629 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	C17orf105	B2RV13	164 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	XKRY	O14609	159 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	REN	P00797	406 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	SPARC	P09486	303 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	UBB	P0CG47	229 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	UBC	P0CG48	685 aa	Known RBP	13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	RAB13	P51153	203 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	RPS27A	P62979	156 aa	Known RBP	13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	UBA52	P62987	128 aa	Known RBP	13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	MRPS10	P82664	201 aa	Known RBP	13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	SERTAD2	Q14140	314 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	LMF2	Q9BU23	707 aa	Known RBP	13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	SLC22A13	Q9Y226	551 aa		13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	FARSA	Q9Y285	508 aa	Known RBP	13.11	□□□□□ -0.31
SMTN-223	ENST00000619644	DISC1	C4P0D8	188 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	ZNF254	O75437	659 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	TACR3	P29371	465 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	POU3F4	P49335	361 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	STAR	P49675	285 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	C9orf50	Q5SZB4	431 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	C1QL3	Q5VWW1	255 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	TMEM92	Q6UXU6	159 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	RAB11FIP2	Q7L804	512 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	LURAP1L	Q8IV03	231 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	TMEM185A	Q8NFB2	350 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	OR2G2	Q8NGZ5	317 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	PHOSPHO2	Q8TCD6	241 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	AMELY	Q99218	206 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	TSNAX	Q99598	290 aa	Known RBP	13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	SLC19A3	Q9BZV2	496 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	ASCC3	Q8N3C0	2202 aa	Known RBP	13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	TICRR	Q7Z2Z1	1910 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	RP1	P56715	2156 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	IGKV1D-42	A0A075B6H8	117 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	ARPC3	O15145	178 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	CTNS	O60931	367 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	ATG12	O94817	140 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	MGMT	P16455	207 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	MNDA	P41218	407 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	ZNF74	Q16587	644 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	SLC6A19	Q695T7	634 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	HAGHL	Q6PII5	290 aa	Predicted RBP	13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	LINC00114	Q6XXX2	140 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	GPR148	Q8TDV2	347 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	DUSP19	Q8WTR2	217 aa		13.1	□□□□□ -0.31
SMTN-223	ENST00000619644	UPK3A	O75631	287 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	CNR1	P21554	472 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	SDHA	P31040	664 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	CTH	P32929	405 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	MEOX2	P50222	304 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	ZNF141	Q15928	474 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	SCGB2B2	Q4G0G5	96 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	WBP2NL	Q6ICG8	309 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	C19orf47	Q8N9M1	422 aa	Known RBP	13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	FAM174A	Q8TBP5	190 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	CCDC74A	Q96AQ1	378 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	ELOVL3	Q9HB03	270 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	PRDM9	Q9NQV7	894 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	DCDC2B	A2VCK2	349 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	EIF4E2	O60573	245 aa	Known RBP	13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	APOC1	P02654	83 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms