RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 BLOC1S5-TXNDC5H3BN57 136 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 TRIM3O75382 744 aaPredicted RBP19.24■□□□□ 0.67
SGMS1-210ENST00000619438 TRAPPC6AO75865 159 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 PYCR1P32322 319 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 EVX1P49640 407 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 SNTA1Q13424 505 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 CBFBQ13951 182 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 LINC01590Q5TEZ4 76 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 HBMQ6B0K9 141 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 GPR139Q6DWJ6 353 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 MTFR2Q6P444 385 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 MARCH3Q86UD3 253 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 MISPQ8IVT2 679 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 C10orf53Q8N6V4 93 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 OR5J2Q8NH18 312 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 KTI12Q96EK9 354 aaPredicted RBP19.24■□□□□ 0.67
SGMS1-210ENST00000619438 Q96M85 177 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 PPP1R3EQ9H7J1 279 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 PLSCR2Q9NRY7 297 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 COMMD3Q9UBI1 195 aa19.24■□□□□ 0.67
SGMS1-210ENST00000619438 DIDO1Q9BTC0 2240 aaKnown RBP19.23■□□□□ 0.67
SGMS1-210ENST00000619438 TRAV36DV7A0A075B6V5 113 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 ZG16O60844 167 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 CELA3AP09093 270 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 CXCR1P25024 350 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 CDKN2AP42771 156 aaKnown RBP19.23■□□□□ 0.67
SGMS1-210ENST00000619438 P2RX1P51575 399 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 CTXN1P60606 82 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 ASAH1Q13510 395 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 CDK5R1Q15078 307 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 GXYLT1Q4G148 440 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 RPL22L1Q6P5R6 122 aaKnown RBP19.23■□□□□ 0.67
SGMS1-210ENST00000619438 FGD2Q7Z6J4 655 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 JAZF1Q86VZ6 243 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 DOLPP1Q86YN1 238 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 OR1J4Q8NGS1 313 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 RPS4Y2Q8TD47 263 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 ZNRF4Q8WWF5 429 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 TAAR8Q969N4 342 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 SMIM19Q96E16 107 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 PELI1Q96FA3 418 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 KLHDC3Q9BQ90 382 aa19.23■□□□□ 0.67
SGMS1-210ENST00000619438 ZNF703Q9H7S9 590 aaPredicted RBP19.23■□□□□ 0.67
SGMS1-210ENST00000619438 TRGV5A0A0B4J1U4 118 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 A1L4Q6 167 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 SMIM30A4D0T7 59 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 LRRC3CA6NJW4 275 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 TMCC2O75069 709 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 MT-ATP6P00846 226 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 HLA-DQB1P01920 261 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 BGLAPP02818 100 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 GP1BBP13224 206 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 MYL9P24844 172 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 EVI2BP34910 448 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 SIRPAP78324 504 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 SLC3A1Q07837 685 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 LEG1Q6P5S2 330 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 C3P1Q6ZMU1 363 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 TRILQ7L0X0 811 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 NANOGNBQ7Z5D8 188 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 RFLNBQ8N5W9 214 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 FAM57AQ8TBR7 257 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 ZPLD1Q8TCW7 415 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 SMAP2Q8WU79 429 aaPredicted RBP19.22■□□□□ 0.67
SGMS1-210ENST00000619438 GHSRQ92847 366 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 TTYH2Q9BSA4 534 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 GALNT9Q9HCQ5 603 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 GRIP1Q9Y3R0 1128 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 DOPEY1Q5JWR5 2465 aa19.22■□□□□ 0.67
SGMS1-210ENST00000619438 TRAV1-2A0A0B4J238 106 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 A0A1W2PQ09 198 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 DVL2O14641 736 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 ADAM10O14672 748 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 SUSD5O60279 629 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 NCR1O76036 304 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 IGHG3P01860 377 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 HIST1H2ABP04908 130 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 CSF3P09919 207 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 RPL18Q07020 188 aaKnown RBP19.21■□□□□ 0.67
SGMS1-210ENST00000619438 TIGD3Q6B0B8 471 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 TMEM81Q6P7N7 255 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 CNIH2Q6PI25 160 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 HIST3H2AQ7L7L0 130 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 CEACAM19Q7Z692 300 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 CD163Q86VB7 1156 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 OR51L1Q8NGJ5 315 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 SNX33Q8WV41 574 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 PHYHIPQ92561 330 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 HIST1H2ACQ93077 130 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 TMEM41AQ96HV5 264 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 ALG12Q9BV10 488 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 PPIL3Q9H2H8 161 aaKnown RBP19.21■□□□□ 0.67
SGMS1-210ENST00000619438 TIGARQ9NQ88 270 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 LIPGQ9Y5X9 500 aa19.21■□□□□ 0.67
SGMS1-210ENST00000619438 SNPHO15079 494 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 HPGDSO60760 199 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 SHC1P29353 583 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 NAA10P41227 235 aaPredicted RBP19.2■□□□□ 0.66
SGMS1-210ENST00000619438 POLR2HP52434 150 aaKnown RBP19.2■□□□□ 0.66
SGMS1-210ENST00000619438 TP53I3Q53FA7 332 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms