RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 RNF141Q8WVD5 230 aa10.29□□□□□ -0.76
CCDC144B-208ENST00000618081 A0A0U1RQS6 177 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 SGCEO43556 437 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 ANGPTL7O43827 346 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 CNR1P21554 472 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 LINC01599Q8WXQ3 324 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 GHSRQ92847 366 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 PDCD1LG2Q9BQ51 273 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 CEPT1Q9Y6K0 416 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 A0A0B4J2A0 478 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 A6NIN4 97 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 ACOD1A6NK06 481 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 GPR12P47775 334 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 AGFG1P52594 562 aaKnown RBP10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 SIX1Q15475 284 aaPredicted RBP10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 KIF26BQ2KJY2 2108 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 RAB6CQ53S08 254 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 DRAXINQ8NBI3 349 aaPredicted RBP10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 ZBED3Q96IU2 234 aaPredicted RBP10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 RAB6CQ9H0N0 254 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 CHRNA9Q9UGM1 479 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 SHPKQ9UHJ6 478 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 CSF3P09919 207 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 MAKP20794 623 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 ERHP84090 104 aaKnown RBP10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 THEM4Q5T1C6 240 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 DND1Q8IYX4 353 aaKnown RBP10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 LFNGQ8NES3 379 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 QRSL1Q9H0R6 528 aaKnown RBP10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 PI4KAP42356 2102 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 M0QZ24 198 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 AQP7O14520 342 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 SMIM17P0DL12 118 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 SFXN4Q6P4A7 337 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 DCXRQ7Z4W1 244 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 LINC00346Q8IVM7 164 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 TRIB1Q96RU8 372 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 MOB1AQ9H8S9 216 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 MTCH1Q9NZJ7 389 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 ALS2Q96Q42 1657 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 CLDN24A6NM45 220 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 RAB27BO00194 218 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 CNMDO75829 334 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 MAP2K6P52564 334 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 CLINT1Q14677 625 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 NKAIN1Q4KMZ8 207 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 ZNRF4Q8WWF5 429 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 METTL17Q9H7H0 456 aaPredicted RBP10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 DHCR7Q9UBM7 475 aaKnown RBP10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 KLF13Q9Y2Y9 288 aaPredicted RBP10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 KRBA1A5PL33 1030 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 GIPRP48546 466 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 SORDQ00796 357 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 TESK1Q15569 626 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 KDM8Q8N371 416 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 CRYBA1P05813 215 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 C21orf33P30042 268 aaPredicted RBP10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 PHLDA2Q53GA4 152 aa10.28□□□□□ -0.76
CCDC144B-208ENST00000618081 TMEM200CA6NKL6 621 aa10.27□□□□□ -0.76
CCDC144B-208ENST00000618081 SYT5O00445 386 aa10.27□□□□□ -0.76
CCDC144B-208ENST00000618081 EFSO43281 561 aa10.27□□□□□ -0.76
CCDC144B-208ENST00000618081 UBL3O95164 117 aa10.27□□□□□ -0.76
CCDC144B-208ENST00000618081 IGFBP1P08833 259 aaPredicted RBP10.27□□□□□ -0.76
CCDC144B-208ENST00000618081 DUSP1P28562 367 aa10.27□□□□□ -0.76
CCDC144B-208ENST00000618081 C1orf140Q5VVS0 124 aa10.27□□□□□ -0.76
CCDC144B-208ENST00000618081 RREB1Q92766 1687 aa10.27□□□□□ -0.76
CCDC144B-208ENST00000618081 P2RY10O00398 339 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 SLCO2B1O94956 709 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 ERVFC1P60507 584 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 EMC4Q5J8M3 183 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 STEAP1BQ6NZ63 245 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 LHFPL2Q6ZUX7 228 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 SYT9Q86SS6 491 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 NMNAT3Q96T66 252 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 HOXD12P35452 270 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 ILKQ13418 452 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 PHYHD1Q5SRE7 291 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 NLRP8Q86W28 1048 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 DNAJC5GQ8N7S2 189 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 REEP6Q96HR9 211 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 ATOH8Q96SQ7 321 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 MS4A8Q9BY19 250 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 BARX1Q9HBU1 254 aaPredicted RBP10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 NPAP1Q9NZP6 1156 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 MTNR1BP49286 362 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 FABP6P51161 128 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 TPMTP51580 245 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 ZNF573Q86YE8 665 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 BHLHE23Q8NDY6 225 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 CHD5Q8TDI0 1954 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 OSGIN1Q9UJX0 560 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 TXNL1O43396 289 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 HSF1Q00613 529 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 THNSL2Q86YJ6 484 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 OR52H1Q8NGJ2 320 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 FAM3DQ96BQ1 224 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 TNFRSF13CQ96RJ3 184 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 FAM185AQ8N0U4 392 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 OR6K3Q8NGY3 331 aa10.27□□□□□ -0.77
CCDC144B-208ENST00000618081 SEC22CQ9BRL7 303 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms