RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 LIN7CQ9NUP9 197 aaKnown RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 NME2P1O60361 137 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 RPL29P47914 159 aaKnown RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 BPIFB3P59826 476 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 PLGLAQ15195 96 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 OR7E24Q6IFN5 339 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 PDXPQ96GD0 296 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 IGHG1P01857 330 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 ALKBH1Q13686 389 aaKnown RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 RNF111Q6ZNA4 994 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 SDSLQ96GA7 329 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 ST6GAL2Q96JF0 529 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 ZIC5Q96T25 663 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 LPAR3Q9UBY5 353 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 GPR55Q9Y2T6 319 aaPredicted RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 DOCK7Q96N67 2140 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 TRBV4-1A0A0J9YWV2 114 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 SULT2B1O00204 365 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 CLDN7O95471 211 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 OR5H8P0DN80 308 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 HNRNPKP61978 463 aaKnown RBP eCLIP8.11□□□□□ -1.11
TTC28-208ENST00000612946 UBE3DQ7Z6J8 389 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 ARHGEF39Q8N4T4 335 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 GPR174Q9BXC1 333 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 CTSFQ9UBX1 484 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 HES2Q9Y543 173 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 CCDC163A0A0D9SF12 145 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 IGFBP1P08833 259 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 LSRQ86X29 649 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 SLC26A10Q8NG04 563 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 GMPPAQ96IJ6 420 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 GAL3ST2Q9H3Q3 398 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 ZNF160Q9HCG1 818 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 TRPM3Q9HCF6 1732 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 SCO1O75880 301 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 BMP5P22003 454 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 GALR1P47211 349 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 MAVSQ7Z434 540 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 REM2Q8IYK8 340 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 PBX4Q9BYU1 374 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 ARL2-SNX15V9GYD0 113 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 NPIPB15A6NHN6 443 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 MBTPS2O43462 519 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 CLDN1O95832 211 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 NKX2-1P43699 371 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 P2RX1P51575 399 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 GRB2P62993 217 aaKnown RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 C21orf62-AS1Q17RA5 79 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 OR2B11Q5JQS5 317 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 ALKBH2Q6NS38 261 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 LRRTM1Q86UE6 522 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 NKX2-4Q9H2Z4 354 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 OR6C76A6NM76 312 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 ZAR1LA6NP61 321 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 GASTP01350 101 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 BTF3P20290 206 aaKnown RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 OR1D2P34982 312 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 PAFAH1B2P68402 229 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 SGCBQ16585 318 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 PM20D1Q6GTS8 502 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 WDR77Q9BQA1 342 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 C1QTNF3Q9BXJ4 246 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 MYBPHLA2RUH7 354 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 OTOL1A6NHN0 477 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 XCR1P46094 333 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 EMP3P54852 163 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 AKR1C1Q04828 323 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 MZB1Q8WU39 189 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 OR5M11Q96RB7 305 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 LHX6Q9UPM6 363 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 VEGFAP15692 232 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 TIGD5Q53EQ6 642 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 TMEM128Q5BJH2 165 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 CLEC4CQ8WTT0 213 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 PKD1L3Q7Z443 1732 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 EP300Q09472 2414 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 IFITM5A6NNB3 132 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 H0YIV9 168 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 IHHQ14623 411 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 TMEM184AQ6ZMB5 413 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 ATF6BQ99941 703 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 TMEM9BQ9NQ34 198 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 FBXO34Q9NWN3 711 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 TREM2Q9NZC2 230 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 PRAMEF27A3QJZ7 478 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 GSTZ1O43708 216 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 MTX2O75431 263 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 EGR3Q06889 387 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 DACT2Q5SW24 774 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 PRAMEF9Q5VWM5 478 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 DCXRQ7Z4W1 244 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 PPP1R1CQ8WVI7 109 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 LHX4Q969G2 390 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 ATOH8Q96SQ7 321 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 FGF20Q9NP95 211 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 POLEQ07864 2286 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 TGM5O43548 720 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 TSPAN6O43657 245 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 HSBP1O75506 76 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 GSTP1P09211 210 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms