RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ELOA3Q8NG57 546 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 OR52L1Q8NGH7 329 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 OR52N1Q8NH53 320 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ROBO4Q8WZ75 1007 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 GMPPAQ96IJ6 420 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ARL5BQ96KC2 179 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 MED18Q9BUE0 208 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 SRXN1Q9BYN0 137 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 OR11A1Q9GZK7 315 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 C6orf62Q9GZU0 229 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ENKD1Q9H0I2 346 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 GP6Q9HCN6 339 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 CHST11Q9NPF2 352 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 SSR3Q9UNL2 185 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 A0A1W2PNV4 684 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 FUOMA2VDF0 154 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 FAM90A27PA6NNH2 459 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 PRSS44E7EML9 344 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 EIF1BO60739 113 aaKnown RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 NPIPB7O75200 414 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 UPK1BO75841 260 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 APOL3O95236 402 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 PLGP00747 810 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 IL1AP01583 271 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 TSPAN19P0C672 248 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 FUT1P19526 365 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 RORCP51449 518 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 AGFG1P52594 562 aaKnown RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 SLC35A1P78382 337 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 FOXF2Q12947 444 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 FHL1Q13642 323 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ZNF181Q2M3W8 571 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 TRIM16LQ309B1 348 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 NIPAL3Q6P499 406 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 THSD4Q6ZMP0 1018 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 PLEKHG7Q6ZR37 379 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 MEPCEQ7L2J0 689 aaKnown RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ZNF554Q86TJ5 538 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 SNX29P2Q8IUI4 249 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 CPOQ8IVL8 374 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 GCNT2Q8N0V5 402 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 PARP16Q8N5Y8 322 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 OR4F15Q8NGB8 312 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 RNF128Q8TEB7 428 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 GATAD2BQ8WXI9 593 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 UFD1Q92890 307 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 LRRC46Q96FV0 321 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 BARHL1Q9BZE3 327 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 NUAK2Q9H093 628 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 PIGMQ9H3S5 423 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 EXOSC4Q9NPD3 245 aaKnown RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 CMC2Q9NRP2 79 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 TXNL4BQ9NX01 149 aaKnown RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ERVK13-1Q9NX77 482 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 H2AFY2Q9P0M6 372 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 KLHL9Q9P2J3 617 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 CRNNQ9UBG3 495 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 PLEKHB1Q9UF11 243 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 IL20RAQ9UHF4 553 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 DAPK2Q9UIK4 370 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 BAIAP2Q9UQB8 552 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 NBPF19A0A087WUL8 3843 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 ANKHD1Q8IWZ3 2542 aaKnown RBP7.84□□□□□ -1.15
SMAD4-217ENST00000611848 A0A087WUJ7 227 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 PNMA8CA0A1B0GUJ8 204 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 ZC3H12DA2A288 527 aaKnown RBP7.84□□□□□ -1.15
SMAD4-217ENST00000611848 SLC35F4A4IF30 521 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 NKX2-6A6NCS4 301 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 OR2T1O43869 369 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 CYTIPO60759 359 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 TNFSF13O75888 250 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 IMPDH2P12268 514 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 PTNP21246 168 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 FGF9P31371 208 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-217ENST00000611848 GABRA5P31644 462 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 KIR2DL2P43627 348 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-217ENST00000611848 ASCL1P50553 236 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 BCAP31P51572 246 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 PSMD7P51665 324 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 OR2B6P58173 313 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 BDH1Q02338 343 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 TFF3Q07654 80 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 GUSBP1Q15486 140 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 ZNF362Q5T0B9 420 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-217ENST00000611848 C1orf140Q5VVS0 124 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 PLBD1Q6P4A8 553 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 FAM214BQ7L5A3 538 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 SHFQ7M4L6 423 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 LHFPL3Q86UP9 236 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 LYSMD2Q8IV50 215 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 KLHL36Q8N4N3 616 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 CNEP1R1Q8N9A8 125 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 RELL2Q8NC24 303 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-217ENST00000611848 OR13C2Q8NGS9 318 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 RNF217Q8TC41 542 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 PTP4A1Q93096 173 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 KISS1RQ969F8 398 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-217ENST00000611848 SLC25A46Q96AG3 418 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 STARD4Q96DR4 205 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 WDFY2Q96P53 400 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms