RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 GGT3PA6NGU5 568 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 H7C417 338 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 CTAG2O75638 210 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 POU3F4P49335 361 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 EFNB2P52799 333 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 PSMA6P60900 246 aaKnown RBP15.52■□□□□ 0.07
NEK3-206ENST00000611833 INSM1Q01101 510 aaPredicted RBP15.52■□□□□ 0.07
NEK3-206ENST00000611833 RAB11BQ15907 218 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 ETFDHQ16134 617 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 KCTD18Q6PI47 426 aaPredicted RBP15.52■□□□□ 0.07
NEK3-206ENST00000611833 ANGPTL6Q8NI99 470 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 RNF128Q8TEB7 428 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 DUSP19Q8WTR2 217 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 FOXQ1Q9C009 403 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 VN1R1Q9GZP7 353 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 MRPL22Q9NWU5 206 aaKnown RBP15.52■□□□□ 0.07
NEK3-206ENST00000611833 MTFP1Q9UDX5 166 aa15.52■□□□□ 0.07
NEK3-206ENST00000611833 TMA7Q9Y2S6 64 aaKnown RBP15.52■□□□□ 0.07
NEK3-206ENST00000611833 G3V3Q6 166 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 DXOO77932 396 aaKnown RBP15.51■□□□□ 0.07
NEK3-206ENST00000611833 AHSA1O95433 338 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 ITGA5P08648 1049 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 CPN1P15169 458 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 CTLA4P16410 223 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 CSRP1P21291 193 aaKnown RBP15.51■□□□□ 0.07
NEK3-206ENST00000611833 FOXL2P58012 376 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 SMAD4Q13485 552 aaKnown RBP15.51■□□□□ 0.07
NEK3-206ENST00000611833 CAMK2BQ13554 666 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 EIF2B1Q14232 305 aaKnown RBP15.51■□□□□ 0.07
NEK3-206ENST00000611833 GRINAQ7Z429 371 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 SPICQ8N5J4 248 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 GPR119Q8TDV5 335 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 PPP1R14AQ96A00 147 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 OR11A1Q9GZK7 315 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 CDCP1Q9H5V8 836 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 TAS2R8Q9NYW2 309 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 VSX1Q9NZR4 365 aaPredicted RBP15.51■□□□□ 0.07
NEK3-206ENST00000611833 DHDHQ9UQ10 334 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 UNC13CQ8NB66 2214 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 TRAV18A0A075B6X5 111 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 LINC00862A6NCI5 91 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 NUDT21O43809 227 aaKnown RBP15.51■□□□□ 0.07
NEK3-206ENST00000611833 DUX1O43812 170 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 MPC2O95563 127 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 PNPP00491 289 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 IL5P05113 134 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 CSF1P09603 554 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 EXOSC2Q13868 293 aaKnown RBP15.51■□□□□ 0.07
NEK3-206ENST00000611833 MELKQ14680 651 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 POU4F3Q15319 338 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 C2orf76Q3KRA6 126 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 ZNF626Q68DY1 528 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 OR7E24Q6IFN5 339 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 DNM1P46Q6ZS02 220 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 LANCL3Q6ZV70 420 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 NDUFAF7Q7L592 441 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 ELMOD2Q8IZ81 293 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 FAM3DQ96BQ1 224 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 ZNF587Q96SQ5 575 aaPredicted RBP15.51■□□□□ 0.07
NEK3-206ENST00000611833 PCED1AQ9H1Q7 454 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 CA10Q9NS85 328 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 UBQLN2Q9UHD9 624 aa15.51■□□□□ 0.07
NEK3-206ENST00000611833 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 IGLV1-36A0A0B4J1U3 117 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 SLC22A23A1A5C7 686 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 PYCARD-AS1I3L0S3 204 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 M0R233 179 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 PLPP3O14495 311 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 NPIPB7O75200 414 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 RIDAP52758 137 aaKnown RBP15.5■□□□□ 0.07
NEK3-206ENST00000611833 TEX30Q5JUR7 227 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 YOD1Q5VVQ6 348 aaPredicted RBP15.5■□□□□ 0.07
NEK3-206ENST00000611833 SHISA6Q6ZSJ9 500 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 CARFQ8N187 725 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 ZNF441Q8N8Z8 693 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 C17orf50Q8WW18 174 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 GINS4Q9BRT9 223 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 UTP23Q9BRU9 249 aaKnown RBP15.5■□□□□ 0.07
NEK3-206ENST00000611833 KCNK15Q9H427 330 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 PPIEQ9UNP9 301 aaKnown RBP15.5■□□□□ 0.07
NEK3-206ENST00000611833 CEP192Q8TEP8 1941 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 CACNA1CQ13936 2221 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 A0A1B0GX78 115 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 OR6C76A6NM76 312 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 SNRPGP15A8MWD9 76 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 FADS1O60427 444 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 PUDPQ08623 228 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 RBMS2Q15434 407 aaKnown RBP15.5■□□□□ 0.07
NEK3-206ENST00000611833 ZNF248Q8NDW4 579 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 OR4C16Q8NGL9 310 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 SLC41A2Q96JW4 573 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 ABHD6Q9BV23 337 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 CKLFQ9UBR5 152 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 CTSFQ9UBX1 484 aa15.5■□□□□ 0.07
NEK3-206ENST00000611833 LOC100289279A0A1B0GTE1 492 aa15.49■□□□□ 0.07
NEK3-206ENST00000611833 SOX1O00570 391 aaPredicted RBP15.49■□□□□ 0.07
NEK3-206ENST00000611833 SLC17A2O00624 439 aa15.49■□□□□ 0.07
NEK3-206ENST00000611833 RLN1P04808 185 aa15.49■□□□□ 0.07
NEK3-206ENST00000611833 GIPP09681 153 aaPredicted RBP15.49■□□□□ 0.07
NEK3-206ENST00000611833 GUCA2AQ02747 115 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms