RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 OR4N2Q8NGD1 307 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 OR2G2Q8NGZ5 317 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 RNF170Q96K19 258 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 SULT4A1Q9BR01 284 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 MIXL1Q9H2W2 232 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 KCNJ16Q9NPI9 418 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 WASF3Q9UPY6 502 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 PIGBOS1A0A0B4J2F0 54 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 H3BUI4 141 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 PER3P56645 1201 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 RPL19P84098 196 aaKnown RBP11.34□□□□□ -0.59
CDH1-212ENST00000611625 TAGLNQ01995 201 aaKnown RBP11.34□□□□□ -0.59
CDH1-212ENST00000611625 EGR3Q06889 387 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 H1FNTQ75WM6 255 aaPredicted RBP11.34□□□□□ -0.59
CDH1-212ENST00000611625 ZNF695Q8IW36 515 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 TMEM200CA6NKL6 621 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 CCSO14618 274 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 MED6O75586 246 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 P2RX1P51575 399 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 EEF1A2Q05639 463 aaKnown RBP11.33□□□□□ -0.6
CDH1-212ENST00000611625 C3orf33Q6P1S2 294 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 ZNF529Q6P280 563 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 FAM122CQ6P4D5 195 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 THSD4Q6ZMP0 1018 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 TAS2R5Q9NYW4 299 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 PTRH2Q9Y3E5 179 aaKnown RBP11.33□□□□□ -0.6
CDH1-212ENST00000611625 NKX2-2O95096 273 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 BLVRBP30043 206 aaPredicted RBP11.33□□□□□ -0.6
CDH1-212ENST00000611625 EEF1A1P68104 462 aaKnown RBP11.33□□□□□ -0.6
CDH1-212ENST00000611625 GLYR1Q49A26 553 aaPredicted RBP11.33□□□□□ -0.6
CDH1-212ENST00000611625 AKR1C8PQ5T2L2 129 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 ZNF100Q8IYN0 542 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 LAT2Q9GZY6 243 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 TRPM6Q9BX84 2022 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 ARID1AO14497 2285 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 TMEM235A6NFC5 223 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 CTSVO60911 334 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 IL10RAQ13651 578 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 TEX261Q6UWH6 196 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 VN1R4Q7Z5H5 301 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 ANGPTL5Q86XS5 388 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 SLC23A1Q9UHI7 598 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 KCNG2Q9UJ96 466 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 ING1Q9UK53 422 aaPredicted RBP11.33□□□□□ -0.6
CDH1-212ENST00000611625 SLC22A13Q9Y226 551 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 U3KQ87 197 aa11.33□□□□□ -0.6
CDH1-212ENST00000611625 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 CD79BP40259 229 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 P2RX3P56373 397 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 CLDN17P56750 224 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 LINC00303Q3SY05 128 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 TOR2AQ5JU69 321 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 LAIR1Q6GTX8 287 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 OPN5Q6U736 354 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 PPP1R3BQ86XI6 285 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 DUSP18Q8NEJ0 188 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 C17orf47Q8NEP4 570 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 OR2AK2Q8NG84 335 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 RRNAD1Q96FB5 475 aaKnown RBP11.32□□□□□ -0.6
CDH1-212ENST00000611625 CMSS1Q9BQ75 279 aaKnown RBP11.32□□□□□ -0.6
CDH1-212ENST00000611625 CDCP1Q9H5V8 836 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 A0A087WUJ7 227 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 K7EPK0 472 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 TMEM127O75204 238 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 SCRG1O75711 98 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 PMP2P02689 132 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 FCGR2AP12318 317 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 MVDP53602 400 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 MRPL49Q13405 166 aaKnown RBP11.32□□□□□ -0.6
CDH1-212ENST00000611625 ZNF169Q14929 603 aaPredicted RBP11.32□□□□□ -0.6
CDH1-212ENST00000611625 ZIC1Q15915 447 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 PRAMEF20Q5VT98 475 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 LAIR2Q6ISS4 152 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 FAM71E2Q8N5Q1 922 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 ZNF649Q9BS31 505 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 SEMA4CQ9C0C4 833 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 STRADBQ9C0K7 418 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 MMP17Q9ULZ9 603 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 HSPB2A8KAH6 182 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 CD3DP04234 171 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 CHRM2P08172 466 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 TUBG1P23258 451 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 DRD3P35462 400 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 CX3CR1P49238 355 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 ZNF79Q15937 498 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 HSPB2Q16082 182 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 C2orf76Q3KRA6 126 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 GLIPR1L1Q6UWM5 242 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 NLRC3Q7RTR2 1065 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 UBE3DQ7Z6J8 389 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 CMTM1Q8IZ96 169 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 TSLPQ969D9 159 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 MRPL38Q96DV4 380 aaKnown RBP11.32□□□□□ -0.6
CDH1-212ENST00000611625 ADGRL4Q9HBW9 690 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 RGPD3A6NKT7 1758 aaPredicted RBP11.32□□□□□ -0.6
CDH1-212ENST00000611625 RGPD4Q7Z3J3 1758 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 TDRD15B5MCY1 1934 aaKnown RBP11.32□□□□□ -0.6
CDH1-212ENST00000611625 E9PI62 339 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 SLC2A1P11166 492 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms