RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 AGAP7PQ5VUJ5 663 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF585AQ6P3V2 769 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 BEND4Q6ZU67 534 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 TMPRSS11FQ6ZWK6 438 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 MKXQ8IYA7 352 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 OR9K2Q8NGE7 335 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 PIGTQ969N2 578 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 FOXRED1Q96CU9 486 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-218ENST00000610726 C10orf90Q96M02 699 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 AGAP4Q96P64 663 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 SORCS2Q96PQ0 1159 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 C1QTNF6Q9BXI9 259 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 MFRPQ9BY79 579 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 SELENOIQ9C0D9 397 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 SLC22A13Q9Y226 551 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 MEIOCA2RUB1 952 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 STMND1H3BQB6 276 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 DVL2O14641 736 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 RAB40ALP0C0E4 278 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 PTPN6P29350 595 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 CLDN15P56746 228 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 ARL6IP1Q15041 203 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 CD226Q15762 336 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 WIPI1Q5MNZ9 446 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-218ENST00000610726 BEST3Q8N1M1 668 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 SLC25A45Q8N413 288 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 ZADH2Q8N4Q0 377 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 RAB40AQ8WXH6 277 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 ROBO4Q8WZ75 1007 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 TAAR8Q969N4 342 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 APH1AQ96BI3 265 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 FCRL1Q96LA6 429 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 VSTM2LQ96N03 204 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 SPACA5Q96QH8 159 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 ARL6Q9H0F7 186 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 OBP2BQ9NPH6 170 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 REV1Q9UBZ9 1251 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 ROS1P08922 2347 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 TNFSF11O14788 317 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 CBR3O75828 277 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 IFNA7P01567 189 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 ZFP36L2P47974 494 aaKnown RBP6.6□□□□□ -1.35
CSDE1-218ENST00000610726 ATP1B3P54709 279 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 CNN3Q15417 329 aaKnown RBP6.6□□□□□ -1.35
CSDE1-218ENST00000610726 PMS2CLQ68D20 193 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 C12orf73Q69YU5 71 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 WDR74Q6RFH5 385 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-218ENST00000610726 APOOLQ6UXV4 268 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 MUCL1Q96DR8 90 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 ZPBPQ9BS86 351 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 SLC6A15Q9H2J7 730 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 NIPAL2Q9H841 368 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 DTX4Q9Y2E6 619 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 KLF13Q9Y2Y9 288 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-218ENST00000610726 A0A096LPE4 126 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 A0A1W2PPZ6 126 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 ALG1L2C9J202 215 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 M0R233 179 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 SGCEO43556 437 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 CTSBP07858 339 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 GUSBP08236 651 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 ERGP11308 486 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 PVALBP20472 110 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-218ENST00000610726 FKBP2P26885 142 aaKnown RBP6.59□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF93P35789 620 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-218ENST00000610726 PPIAP62937 165 aaKnown RBP6.59□□□□□ -1.35
CSDE1-218ENST00000610726 TRIP6Q15654 476 aaKnown RBP6.59□□□□□ -1.35
CSDE1-218ENST00000610726 TOMM34Q15785 309 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-218ENST00000610726 EMC4Q5J8M3 183 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 C1QL3Q5VWW1 255 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 NPSR1Q6W5P4 371 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 PRSS45Q7RTY3 260 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 CCDC36Q8IYA8 594 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 CARFQ8N187 725 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 BATF2Q8N1L9 274 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 OR5L1Q8NGL2 311 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 OR8D4Q8NGM9 314 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 SLAMF6Q96DU3 332 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 LRRC46Q96FV0 321 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF764Q96H86 408 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-218ENST00000610726 IP6K3Q96PC2 410 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 IER2Q9BTL4 223 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 TMEM59Q9BXS4 323 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 SLC52A3Q9NQ40 469 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 NDUFB11Q9NX14 153 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 LUZP4Q9P127 313 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 CES1P1Q9UKY3 287 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 WASF3Q9UPY6 502 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 UBE2J1Q9Y385 318 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-218ENST00000610726 IGHV5-10-1A0A0J9YXX1 117 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 CENPVL1A0A0U1RR11 272 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 LOC107986453A0A1B0GWG9 222 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 PLSCR5A0PG75 271 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF814B7Z6K7 855 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 SCGNO76038 276 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 SLC22A5O76082 557 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 CNOT4O95628 575 aaKnown RBP6.59□□□□□ -1.35
CSDE1-218ENST00000610726 AKAIN1P0CW23 69 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 S100A1P23297 94 aa6.59□□□□□ -1.35
CSDE1-218ENST00000610726 GDNFP39905 211 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms