RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 RAP1AP62834 184 aa11.03□□□□□ -0.64
CD9-212ENST00000610354 MRPS34P82930 218 aaKnown RBP11.03□□□□□ -0.64
CD9-212ENST00000610354 DBPQ10586 325 aaPredicted RBP11.03□□□□□ -0.64
CD9-212ENST00000610354 ADIPOQQ15848 244 aa11.03□□□□□ -0.64
CD9-212ENST00000610354 THEM4Q5T1C6 240 aa11.03□□□□□ -0.64
CD9-212ENST00000610354 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
CD9-212ENST00000610354 FAM205BPQ63HN1 556 aa11.03□□□□□ -0.64
CD9-212ENST00000610354 PTCHD4Q6ZW05 846 aa11.03□□□□□ -0.64
CD9-212ENST00000610354 FBXL14Q8N1E6 418 aa11.03□□□□□ -0.64
CD9-212ENST00000610354 CIARTQ8N365 385 aaPredicted RBP11.03□□□□□ -0.64
CD9-212ENST00000610354 LRRC18Q8N456 261 aa11.03□□□□□ -0.64
CD9-212ENST00000610354 OR9Q2Q8NGE9 314 aa11.03□□□□□ -0.64
CD9-212ENST00000610354 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
CD9-212ENST00000610354 Q96MF0 132 aa11.03□□□□□ -0.64
CD9-212ENST00000610354 CACNG6Q9BXT2 260 aa11.03□□□□□ -0.64
CD9-212ENST00000610354 CADM1Q9BY67 442 aaKnown RBP11.03□□□□□ -0.64
CD9-212ENST00000610354 RASSF4Q9H2L5 321 aa11.03□□□□□ -0.64
CD9-212ENST00000610354 MOV10Q9HCE1 1003 aaKnown RBP11.03□□□□□ -0.64
CD9-212ENST00000610354 TMEM129A0AVI4 362 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 TRIM64A6NGJ6 449 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 TRIM64BA6NI03 449 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 TNFRSF11BO00300 401 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 GSC2O15499 205 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 OR10H3O60404 316 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 PPP1R3DO95685 299 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 TXNDC12O95881 172 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 SERPINA5P05154 406 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 FPR3P25089 353 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 CDKN2AP42771 156 aaKnown RBP11.02□□□□□ -0.65
CD9-212ENST00000610354 CHRNB3Q05901 458 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 SGCAQ16586 387 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 RFX4Q33E94 735 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 NRN1LQ496H8 165 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 DNAL1Q4LDG9 190 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 VHLLQ6RSH7 139 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 SMARCD3Q6STE5 483 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 DPY19L2P2Q6ZN68 376 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 SLC16A14Q7RTX9 510 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 PAQR4Q8N4S7 273 aaPredicted RBP11.02□□□□□ -0.65
CD9-212ENST00000610354 NUP37Q8NFH4 326 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 OR4F15Q8NGB8 312 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 GNPDA2Q8TDQ7 276 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 CANT1Q8WVQ1 401 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 NANOS1Q8WY41 292 aaKnown RBP11.02□□□□□ -0.65
CD9-212ENST00000610354 FBXO17Q96EF6 278 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 SAMD8Q96LT4 415 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 ZNF570Q96NI8 536 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 RBP7Q96R05 134 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 KCNS3Q9BQ31 491 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 OR52D1Q9H346 318 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 DENND2DQ9H6A0 471 aaPredicted RBP11.02□□□□□ -0.65
CD9-212ENST00000610354 SIAEQ9HAT2 523 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 CA10Q9NS85 328 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 FAIMQ9NVQ4 179 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 GRHPRQ9UBQ7 328 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 TMCC3Q9ULS5 477 aa11.02□□□□□ -0.65
CD9-212ENST00000610354 ZANQ9Y493 2812 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 CR1P17927 2039 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 PRSS37A4D1T9 235 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 AQP12BA6NM10 295 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 GPRIN2O60269 458 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 DNAJC8O75937 253 aaPredicted RBP11.01□□□□□ -0.65
CD9-212ENST00000610354 KRT36O76013 467 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 FARS2O95363 451 aaKnown RBP11.01□□□□□ -0.65
CD9-212ENST00000610354 RAB36O95755 333 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 GASTP01350 101 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 IGFBP1P08833 259 aaPredicted RBP11.01□□□□□ -0.65
CD9-212ENST00000610354 OR4A8P0C604 315 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 CTLA4P16410 223 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 ZNF32P17041 273 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 NR4A1P22736 598 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 SDHAP31040 664 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 TSPAN31Q12999 210 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 KRR1Q13601 381 aaKnown RBP11.01□□□□□ -0.65
CD9-212ENST00000610354 ENDOGQ14249 297 aaKnown RBP11.01□□□□□ -0.65
CD9-212ENST00000610354 FAM98BQ52LJ0 330 aaKnown RBP11.01□□□□□ -0.65
CD9-212ENST00000610354 FAM27BQ5VT28 67 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 OTPQ5XKR4 325 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 OR2T5Q6IEZ7 315 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 KRT80Q6KB66 452 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 UGT2A3Q6UWM9 527 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 DNM1P46Q6ZS02 220 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 TMEM179BQ7Z7N9 219 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 AQP12AQ8IXF9 295 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 CPEB3Q8NE35 698 aaKnown RBP11.01□□□□□ -0.65
CD9-212ENST00000610354 IL17RDQ8NFM7 739 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 OR2T29Q8NH02 315 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 FANK1Q8TC84 345 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 FOXN4Q96NZ1 517 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 CHID1Q9BWS9 393 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 TRIM15Q9C019 465 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 GSX1Q9H4S2 264 aaPredicted RBP11.01□□□□□ -0.65
CD9-212ENST00000610354 VSX1Q9NZR4 365 aaPredicted RBP11.01□□□□□ -0.65
CD9-212ENST00000610354 POMPQ9Y244 141 aa11.01□□□□□ -0.65
CD9-212ENST00000610354 DCTN6O00399 190 aa11□□□□□ -0.65
CD9-212ENST00000610354 SOCS2O14508 198 aa11□□□□□ -0.65
CD9-212ENST00000610354 TP53P04637 393 aaPredicted RBP11□□□□□ -0.65
CD9-212ENST00000610354 RAP2AP10114 183 aa11□□□□□ -0.65
CD9-212ENST00000610354 CCL2P13500 99 aa11□□□□□ -0.65
CD9-212ENST00000610354 NPR2P20594 1047 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms