RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 MYPOPQ86VE0 399 aaPredicted RBP16.6■□□□□ 0.25
SGMS1-208ENST00000608287 IGFN1Q86VF2 1251 aa16.6■□□□□ 0.25
SGMS1-208ENST00000608287 LINC01356Q8N9X3 169 aa16.6■□□□□ 0.25
SGMS1-208ENST00000608287 OR13C2Q8NGS9 318 aa16.6■□□□□ 0.25
SGMS1-208ENST00000608287 SLC7A13Q8TCU3 470 aa16.6■□□□□ 0.25
SGMS1-208ENST00000608287 TXNIPQ9H3M7 391 aa16.6■□□□□ 0.25
SGMS1-208ENST00000608287 STX18Q9P2W9 335 aaKnown RBP16.6■□□□□ 0.25
SGMS1-208ENST00000608287 A0A1W2PRQ8 180 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 TMEM89A2RUT3 159 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 TRIM77I1YAP6 450 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 TRMUO75648 421 aaKnown RBP16.59■□□□□ 0.25
SGMS1-208ENST00000608287 CALB2P22676 271 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 SLC9A3P48764 834 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 CTXN1P60606 82 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 DGCR6Q14129 220 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 GSG1Q2KHT4 349 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 ARMC4Q5T2S8 1044 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 PIWIL3Q7Z3Z3 882 aaKnown RBP16.59■□□□□ 0.25
SGMS1-208ENST00000608287 SEMA6DQ8NFY4 1073 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 MCHR2Q969V1 340 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 MCUR1Q96AQ8 359 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 JMJD8Q96S16 334 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 RBM4Q9BWF3 364 aaKnown RBP16.59■□□□□ 0.25
SGMS1-208ENST00000608287 MRPL13Q9BYD1 178 aaKnown RBP16.59■□□□□ 0.25
SGMS1-208ENST00000608287 B3GNT2Q9NY97 397 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 TMEM5Q9Y2B1 443 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 TENM1Q9UKZ4 2725 aa16.59■□□□□ 0.25
SGMS1-208ENST00000608287 ARFGEF3Q5TH69 2177 aa16.58■□□□□ 0.25
SGMS1-208ENST00000608287 NPIPB13A6NJU9 1138 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 CENPBD1B2RD01 187 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 NPIPB4C9JG80 1138 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 ERCC1P07992 297 aaPredicted RBP16.58■□□□□ 0.24
SGMS1-208ENST00000608287 CALCRP30988 508 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 PTDSS1P48651 473 aaKnown RBP16.58■□□□□ 0.24
SGMS1-208ENST00000608287 ZNF84P51523 738 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 TAF11Q15544 211 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 HIST3H3Q16695 136 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 ANKDD1AQ495B1 522 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 RINLQ6ZS11 566 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 TMPRSS11FQ6ZWK6 438 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 SKA3Q8IX90 412 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 SLC22A24Q8N4F4 322 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 TEX29Q8N6K0 151 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 OR52J3Q8NH60 311 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 FAM216AQ8WUB2 273 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 HDAC2Q92769 488 aaKnown RBP16.58■□□□□ 0.24
SGMS1-208ENST00000608287 FAM46AQ96IP4 442 aaKnown RBP16.58■□□□□ 0.24
SGMS1-208ENST00000608287 FOXN4Q96NZ1 517 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 SEPHS2Q99611 448 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 BPESC1Q9GZL8 116 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 NOX3Q9HBY0 568 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 TMEM38BQ9NVV0 291 aa16.58■□□□□ 0.24
SGMS1-208ENST00000608287 ZNF346Q9UL40 294 aaKnown RBP16.58■□□□□ 0.24
SGMS1-208ENST00000608287 TRBV4-1A0A0J9YWV2 114 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 CDC42EP2O14613 210 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 ENTPD5O75356 428 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 LY6HO94772 140 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 UBL3O95164 117 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 FARS2O95363 451 aaKnown RBP16.57■□□□□ 0.24
SGMS1-208ENST00000608287 RAB36O95755 333 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 SEMG1P04279 462 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 OR8G3PP0DMU2 310 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 LIMS1P48059 325 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 RPL27P61353 136 aaKnown RBP16.57■□□□□ 0.24
SGMS1-208ENST00000608287 RAB1AP62820 205 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 SPIBQ01892 262 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 CD47Q08722 323 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 FHL1Q13642 323 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 VHLLQ6RSH7 139 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 CYP2R1Q6VVX0 501 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 LRRC75AQ8NAA5 344 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 OR4F15Q8NGB8 312 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 BCAS4Q8TDM0 211 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 SH3GL3Q99963 347 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 CA10Q9NS85 328 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 ZNF224Q9NZL3 707 aa16.57■□□□□ 0.24
SGMS1-208ENST00000608287 IGHV2OR16-5A0A0B4J2B6 119 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 VENTXO95231 258 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 GADD45GO95257 159 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 SLC2A10O95528 541 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 IGHMP01871 453 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 FABP3P05413 133 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 PATE4P0C8F1 98 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 T-ENOLP0DO92 83 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 RPL4P36578 427 aaKnown RBP16.56■□□□□ 0.24
SGMS1-208ENST00000608287 GIPRP48546 466 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 DVL1P1P54792 670 aaPredicted RBP16.56■□□□□ 0.24
SGMS1-208ENST00000608287 SMIM11AP58511 58 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 ZBED5Q49AG3 693 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 ARHGAP24Q8N264 748 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 IL17RDQ8NFM7 739 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 OR4K5Q8NGD3 323 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 FBXO17Q96EF6 278 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 MS4A3Q96HJ5 214 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 DHRS1Q96LJ7 313 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 SORCS2Q96PQ0 1159 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 TSPAN32Q96QS1 320 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 ZNF696Q9H7X3 374 aa16.56■□□□□ 0.24
SGMS1-208ENST00000608287 KRCC1Q9NPI7 259 aaPredicted RBP16.56■□□□□ 0.24
SGMS1-208ENST00000608287 ACTR3BQ9P1U1 418 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms